RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.49
LRPPRC-205ENST00000447246 HNRNPMP52272 730 aaKnown RBP eCLIP24.32■■□□□ 1.486e-9■■■■■ 27.6
LRPPRC-205ENST00000447246 FBXO31Q5XUX0 539 aaPredicted RBP24.32■■□□□ 1.48
LRPPRC-205ENST00000447246 ANKLE2Q86XL3 938 aa24.31■■□□□ 1.48
LRPPRC-205ENST00000447246 IQGAP1P46940 1657 aa24.3■■□□□ 1.48
LRPPRC-205ENST00000447246 SYNMO15061 1565 aa24.29■■□□□ 1.48
LRPPRC-205ENST00000447246 EEA1Q15075 1411 aa24.27■■□□□ 1.48
LRPPRC-205ENST00000447246 MED14O60244 1454 aa24.26■■□□□ 1.47
LRPPRC-205ENST00000447246 DEPDC5O75140 1603 aa24.26■■□□□ 1.47
LRPPRC-205ENST00000447246 SRCAPQ6ZRS2 3230 aa24.23■■□□□ 1.47
LRPPRC-205ENST00000447246 ADGBQ8N7X0 1667 aa24.23■■□□□ 1.47
LRPPRC-205ENST00000447246 UGGT1Q9NYU2 1555 aa24.22■■□□□ 1.47
LRPPRC-205ENST00000447246 PZPP20742 1482 aa24.2■■□□□ 1.47
LRPPRC-205ENST00000447246 THEMISQ8N1K5 641 aaPredicted RBP24.19■■□□□ 1.46
LRPPRC-205ENST00000447246 FAM135AQ9P2D6 1515 aa24.19■■□□□ 1.46
LRPPRC-205ENST00000447246 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
LRPPRC-205ENST00000447246 XIRP1Q702N8 1843 aaKnown RBP24.17■■□□□ 1.46
LRPPRC-205ENST00000447246 CCDC18Q5T9S5 1454 aa24.16■■□□□ 1.46
LRPPRC-205ENST00000447246 UBTFP17480 764 aaKnown RBP24.15■■□□□ 1.46
LRPPRC-205ENST00000447246 KDM5DQ9BY66 1539 aa24.14■■□□□ 1.45
LRPPRC-205ENST00000447246 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
LRPPRC-205ENST00000447246 KIAA1107Q9UPP5 1409 aa24.13■■□□□ 1.45
LRPPRC-205ENST00000447246 ZC3H13Q5T200 1668 aaKnown RBP24.13■■□□□ 1.45
LRPPRC-205ENST00000447246 MIA2Q96PC5 1412 aa24.12■■□□□ 1.45
LRPPRC-205ENST00000447246 PLEKHH2Q8IVE3 1493 aa24.11■■□□□ 1.45
LRPPRC-205ENST00000447246 UPF1Q92900 1129 aaKnown RBP eCLIP24.1■■□□□ 1.45
LRPPRC-205ENST00000447246 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.44
LRPPRC-205ENST00000447246 CFDP1Q9UEE9 299 aaPredicted RBP24.07■■□□□ 1.44
LRPPRC-205ENST00000447246 FAM135BQ49AJ0 1406 aa24.07■■□□□ 1.44
LRPPRC-205ENST00000447246 ROBO1Q9Y6N7 1651 aa24.06■■□□□ 1.44
LRPPRC-205ENST00000447246 KIF3BO15066 747 aa24.06■■□□□ 1.44
LRPPRC-205ENST00000447246 DHX29Q7Z478 1369 aaKnown RBP24.04■■□□□ 1.44
LRPPRC-205ENST00000447246 WASHC2CQ9Y4E1 1318 aa24.04■■□□□ 1.44
LRPPRC-205ENST00000447246 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
LRPPRC-205ENST00000447246 TRIM52Q96A61 297 aa24.01■■□□□ 1.43
LRPPRC-205ENST00000447246 CCNB3Q8WWL7 1395 aa23.99■■□□□ 1.43
LRPPRC-205ENST00000447246 SCAF11Q99590 1463 aaKnown RBP23.97■■□□□ 1.43
LRPPRC-205ENST00000447246 MBD5Q9P267 1494 aa23.96■■□□□ 1.43
LRPPRC-205ENST00000447246 UBR1Q8IWV7 1749 aa23.94■■□□□ 1.42
LRPPRC-205ENST00000447246 RTEL1-TNFRSF6BF6WH68 1400 aa23.93■■□□□ 1.42
LRPPRC-205ENST00000447246 PHLPP1O60346 1717 aa23.93■■□□□ 1.42
LRPPRC-205ENST00000447246 TMEM94Q12767 1356 aa23.93■■□□□ 1.42
LRPPRC-205ENST00000447246 FYCO1Q9BQS8 1478 aa23.93■■□□□ 1.42
LRPPRC-205ENST00000447246 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
LRPPRC-205ENST00000447246 LTKP29376 864 aa23.91■■□□□ 1.42
LRPPRC-205ENST00000447246 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
LRPPRC-205ENST00000447246 ERVK-7P63135 1459 aa23.9■■□□□ 1.42
LRPPRC-205ENST00000447246 LRP6O75581 1613 aa23.9■■□□□ 1.42
LRPPRC-205ENST00000447246 TIAM1Q13009 1591 aa23.89■■□□□ 1.41
LRPPRC-205ENST00000447246 JCADQ9P266 1359 aa23.89■■□□□ 1.41
LRPPRC-205ENST00000447246 NCOA2Q15596 1464 aa23.88■■□□□ 1.41
LRPPRC-205ENST00000447246 ABCC3O15438 1527 aa23.86■■□□□ 1.41
LRPPRC-205ENST00000447246 TXNDC2Q86VQ3 553 aa23.86■■□□□ 1.41
LRPPRC-205ENST00000447246 CFAP65Q6ZU64 1925 aaKnown RBP23.85■■□□□ 1.41
LRPPRC-205ENST00000447246 LRRC9Q6ZRR7 1453 aa23.85■■□□□ 1.41
LRPPRC-205ENST00000447246 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
LRPPRC-205ENST00000447246 MEX3CQ5U5Q3 659 aaKnown RBP23.83■■□□□ 1.41
LRPPRC-205ENST00000447246 SLIT1O75093 1534 aa23.83■■□□□ 1.41
LRPPRC-205ENST00000447246 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
LRPPRC-205ENST00000447246 COL16A1Q07092 1604 aaPredicted RBP23.81■■□□□ 1.4
LRPPRC-205ENST00000447246 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
LRPPRC-205ENST00000447246 MTUS2Q5JR59 1369 aa23.79■■□□□ 1.4
LRPPRC-205ENST00000447246 CEP152O94986 1710 aa23.79■■□□□ 1.4
LRPPRC-205ENST00000447246 PROSER2Q86WR7 435 aaPredicted RBP23.78■■□□□ 1.4
LRPPRC-205ENST00000447246 RXRBP28702 533 aa23.75■■□□□ 1.39
LRPPRC-205ENST00000447246 EID1Q9Y6B2 187 aa23.74■■□□□ 1.39
LRPPRC-205ENST00000447246 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
LRPPRC-205ENST00000447246 KCNA6P17658 529 aa23.73■■□□□ 1.39
LRPPRC-205ENST00000447246 CAMSAP2Q08AD1 1489 aa23.73■■□□□ 1.39
LRPPRC-205ENST00000447246 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
LRPPRC-205ENST00000447246 MSH6P52701 1360 aa23.72■■□□□ 1.39
LRPPRC-205ENST00000447246 MROH1Q8NDA8 1641 aa23.72■■□□□ 1.39
LRPPRC-205ENST00000447246 SPATA31A6Q5VVP1 1343 aa23.71■■□□□ 1.39
LRPPRC-205ENST00000447246 SLC26A8Q96RN1 970 aa23.71■■□□□ 1.39
LRPPRC-205ENST00000447246 PIK3C2BO00750 1634 aa23.7■■□□□ 1.39
LRPPRC-205ENST00000447246 CDK12Q9NYV4 1490 aaPredicted RBP23.7■■□□□ 1.38
LRPPRC-205ENST00000447246 NWD1Q149M9 1564 aa23.68■■□□□ 1.38
LRPPRC-205ENST00000447246 TMEM2Q9UHN6 1383 aa23.67■■□□□ 1.38
LRPPRC-205ENST00000447246 SHPRHQ149N8 1683 aa23.67■■□□□ 1.38
LRPPRC-205ENST00000447246 NKTRP30414 1462 aaKnown RBP23.67■■□□□ 1.38
LRPPRC-205ENST00000447246 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
LRPPRC-205ENST00000447246 RGS12O14924 1447 aa23.66■■□□□ 1.38
LRPPRC-205ENST00000447246 FGD6Q6ZV73 1430 aa23.66■■□□□ 1.38
LRPPRC-205ENST00000447246 TET3O43151 1660 aa23.64■■□□□ 1.37
LRPPRC-205ENST00000447246 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.37
LRPPRC-205ENST00000447246 NUTM2BA6NNL0 878 aaPredicted RBP23.63■■□□□ 1.37
LRPPRC-205ENST00000447246 NUTM2EB1AL46 878 aaPredicted RBP23.63■■□□□ 1.37
LRPPRC-205ENST00000447246 NUTM2AQ8IVF1 878 aaPredicted RBP23.63■■□□□ 1.37
LRPPRC-205ENST00000447246 EIF2AK4Q9P2K8 1649 aaKnown RBP23.62■■□□□ 1.37
LRPPRC-205ENST00000447246 SETBP1Q9Y6X0 1596 aa23.61■■□□□ 1.37
LRPPRC-205ENST00000447246 AFF2P51816 1311 aa23.6■■□□□ 1.37
LRPPRC-205ENST00000447246 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
LRPPRC-205ENST00000447246 STAG3Q9UJ98 1225 aa23.6■■□□□ 1.37
LRPPRC-205ENST00000447246 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
LRPPRC-205ENST00000447246 AHDC1Q5TGY3 1603 aaPredicted RBP23.59■■□□□ 1.37
LRPPRC-205ENST00000447246 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
LRPPRC-205ENST00000447246 NUTM2DQ5VT03 806 aaPredicted RBP23.58■■□□□ 1.37
LRPPRC-205ENST00000447246 TSPY4P0CV99 314 aa23.56■■□□□ 1.36
LRPPRC-205ENST00000447246 TSPY10P0CW01 314 aa23.56■■□□□ 1.36
LRPPRC-205ENST00000447246 RSPH4AQ5TD94 716 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms