RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 DEPDC5O75140 1603 aa26.87■■□□□ 1.89
TRAPPC4-203ENST00000447216 MROH1Q8NDA8 1641 aa26.87■■□□□ 1.89
TRAPPC4-203ENST00000447216 UNC13BO14795 1591 aa26.86■■□□□ 1.89
TRAPPC4-203ENST00000447216 MLECQ14165 292 aa26.85■■□□□ 1.89
TRAPPC4-203ENST00000447216 GGT6Q6P531 493 aa26.84■■□□□ 1.89
TRAPPC4-203ENST00000447216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.84■■□□□ 1.89
TRAPPC4-203ENST00000447216 CEP152O94986 1710 aa26.8■■□□□ 1.88
TRAPPC4-203ENST00000447216 PRDM15P57071 1507 aaPredicted RBP26.8■■□□□ 1.88
TRAPPC4-203ENST00000447216 TRIM52Q96A61 297 aa26.79■■□□□ 1.88
TRAPPC4-203ENST00000447216 NUP155O75694 1391 aa26.75■■□□□ 1.87
TRAPPC4-203ENST00000447216 IQGAP3Q86VI3 1631 aa26.75■■□□□ 1.87
TRAPPC4-203ENST00000447216 FER1L4A9Z1Z3 1794 aa26.74■■□□□ 1.87
TRAPPC4-203ENST00000447216 HRCP23327 699 aa26.74■■□□□ 1.87
TRAPPC4-203ENST00000447216 VWDEQ8N2E2 1590 aa26.74■■□□□ 1.87
TRAPPC4-203ENST00000447216 CLTCQ00610 1675 aaKnown RBP26.73■■□□□ 1.87
TRAPPC4-203ENST00000447216 KDM5DQ9BY66 1539 aa26.73■■□□□ 1.87
TRAPPC4-203ENST00000447216 KANK1Q14678 1352 aa26.72■■□□□ 1.87
TRAPPC4-203ENST00000447216 ADAMTSL3P82987 1691 aa26.71■■□□□ 1.87
TRAPPC4-203ENST00000447216 ABCC3O15438 1527 aa26.7■■□□□ 1.87
TRAPPC4-203ENST00000447216 ZC3H13Q5T200 1668 aaKnown RBP26.7■■□□□ 1.87
TRAPPC4-203ENST00000447216 PZPP20742 1482 aa26.7■■□□□ 1.87
TRAPPC4-203ENST00000447216 FAM135AQ9P2D6 1515 aa26.7■■□□□ 1.86
TRAPPC4-203ENST00000447216 MADDQ8WXG6 1647 aa26.69■■□□□ 1.86
TRAPPC4-203ENST00000447216 CFAP65Q6ZU64 1925 aaKnown RBP26.69■■□□□ 1.86
TRAPPC4-203ENST00000447216 WASHC2CQ9Y4E1 1318 aa26.67■■□□□ 1.86
TRAPPC4-203ENST00000447216 TET3O43151 1660 aa26.66■■□□□ 1.86
TRAPPC4-203ENST00000447216 RIMS1Q86UR5 1692 aaKnown RBP26.66■■□□□ 1.86
TRAPPC4-203ENST00000447216 CAMSAP1Q5T5Y3 1602 aa26.66■■□□□ 1.86
TRAPPC4-203ENST00000447216 PPP6R1Q9UPN7 881 aa26.64■■□□□ 1.86
TRAPPC4-203ENST00000447216 LMTK2Q8IWU2 1503 aa26.64■■□□□ 1.85
TRAPPC4-203ENST00000447216 ACIN1Q9UKV3 1341 aaKnown RBP26.64■■□□□ 1.85
TRAPPC4-203ENST00000447216 ESF1Q9H501 851 aaKnown RBP26.63■■□□□ 1.85
TRAPPC4-203ENST00000447216 SLC4A1APQ9BWU0 796 aaKnown RBP26.62■■□□□ 1.85
TRAPPC4-203ENST00000447216 MROH2AA6NES4 1674 aa26.61■■□□□ 1.85
TRAPPC4-203ENST00000447216 E9PCH4 1651 aa26.61■■□□□ 1.85
TRAPPC4-203ENST00000447216 MPHOSPH9Q99550 1183 aa26.61■■□□□ 1.85
TRAPPC4-203ENST00000447216 EFCAB6Q5THR3 1501 aa26.6■■□□□ 1.85
TRAPPC4-203ENST00000447216 CNTLNQ9NXG0 1405 aa26.57■■□□□ 1.84
TRAPPC4-203ENST00000447216 C3P01024 1663 aa26.57■■□□□ 1.84
TRAPPC4-203ENST00000447216 PKD2Q13563 968 aa26.56■■□□□ 1.84
TRAPPC4-203ENST00000447216 DHX57Q6P158 1386 aaKnown RBP26.55■■□□□ 1.84
TRAPPC4-203ENST00000447216 FOXD1Q16676 465 aa26.54■■□□□ 1.84
TRAPPC4-203ENST00000447216 ZMYM3Q14202 1370 aa26.53■■□□□ 1.84
TRAPPC4-203ENST00000447216 KDM4FA0A1W2PPD8 638 aa26.52■■□□□ 1.84
TRAPPC4-203ENST00000447216 NPATQ14207 1427 aa26.52■■□□□ 1.84
TRAPPC4-203ENST00000447216 PLPPR3Q6T4P5 718 aa26.52■■□□□ 1.84
TRAPPC4-203ENST00000447216 PREX1Q8TCU6 1659 aa26.5■■□□□ 1.83
TRAPPC4-203ENST00000447216 ARHGAP31Q2M1Z3 1444 aa26.5■■□□□ 1.83
TRAPPC4-203ENST00000447216 CEBPAP49715 358 aaPredicted RBP26.5■■□□□ 1.83
TRAPPC4-203ENST00000447216 SPHKAPQ2M3C7 1700 aa26.49■■□□□ 1.83
TRAPPC4-203ENST00000447216 FBXO31Q5XUX0 539 aaPredicted RBP26.46■■□□□ 1.83
TRAPPC4-203ENST00000447216 RPRD2Q5VT52 1461 aaKnown RBP26.46■■□□□ 1.83
TRAPPC4-203ENST00000447216 PTPRMP28827 1452 aa26.45■■□□□ 1.82
TRAPPC4-203ENST00000447216 ERVK-7P63135 1459 aa26.43■■□□□ 1.82
TRAPPC4-203ENST00000447216 PLA2R1Q13018 1463 aa26.41■■□□□ 1.82
TRAPPC4-203ENST00000447216 SYNMO15061 1565 aa26.41■■□□□ 1.82
TRAPPC4-203ENST00000447216 SPATA31D1Q6ZQQ2 1576 aa26.41■■□□□ 1.82
TRAPPC4-203ENST00000447216 NOS1P29475 1434 aa26.39■■□□□ 1.82
TRAPPC4-203ENST00000447216 PTPRTO14522 1441 aa26.39■■□□□ 1.81
TRAPPC4-203ENST00000447216 CCER1Q8TC90 406 aaPredicted RBP26.38■■□□□ 1.81
TRAPPC4-203ENST00000447216 ANKRD30BQ9BXX2 1392 aa26.37■■□□□ 1.81
TRAPPC4-203ENST00000447216 TRPM2O94759 1503 aa26.37■■□□□ 1.81
TRAPPC4-203ENST00000447216 UGGT1Q9NYU2 1555 aa26.37■■□□□ 1.81
TRAPPC4-203ENST00000447216 CLTCL1P53675 1640 aa26.36■■□□□ 1.81
TRAPPC4-203ENST00000447216 SETD1BQ9UPS6 1966 aaKnown RBP26.35■■□□□ 1.81
TRAPPC4-203ENST00000447216 TNRQ92752 1358 aa26.34■■□□□ 1.81
TRAPPC4-203ENST00000447216 PIK3C2BO00750 1634 aa26.32■■□□□ 1.8
TRAPPC4-203ENST00000447216 KIF1BO60333 1816 aa26.29■■□□□ 1.8
TRAPPC4-203ENST00000447216 MYO5BQ9ULV0 1848 aa26.29■■□□□ 1.8
TRAPPC4-203ENST00000447216 MYO3AQ8NEV4 1616 aa26.28■■□□□ 1.8
TRAPPC4-203ENST00000447216 SIN3AQ96ST3 1273 aa26.28■■□□□ 1.8
TRAPPC4-203ENST00000447216 CCDC144AA2RUR9 1427 aa26.27■■□□□ 1.8
TRAPPC4-203ENST00000447216 IDI1Q13907 227 aa26.25■■□□□ 1.79
TRAPPC4-203ENST00000447216 NEUROD1Q13562 356 aa26.22■■□□□ 1.79
TRAPPC4-203ENST00000447216 SLC52A1Q9NWF4 448 aa26.22■■□□□ 1.79
TRAPPC4-203ENST00000447216 NLRP1Q9C000 1473 aa26.2■■□□□ 1.78
TRAPPC4-203ENST00000447216 CHGAP10645 457 aaKnown RBP26.2■■□□□ 1.78
TRAPPC4-203ENST00000447216 UBR1Q8IWV7 1749 aa26.19■■□□□ 1.78
TRAPPC4-203ENST00000447216 CLSPNQ9HAW4 1339 aa26.19■■□□□ 1.78
TRAPPC4-203ENST00000447216 ZNF142P52746 1687 aaPredicted RBP26.19■■□□□ 1.78
TRAPPC4-203ENST00000447216 TMEM131LA2VDJ0 1609 aa26.19■■□□□ 1.78
TRAPPC4-203ENST00000447216 CEP170BQ9Y4F5 1589 aaPredicted RBP26.18■■□□□ 1.78
TRAPPC4-203ENST00000447216 ADGRB3O60242 1522 aa26.18■■□□□ 1.78
TRAPPC4-203ENST00000447216 A2ML1A8K2U0 1454 aa26.17■■□□□ 1.78
TRAPPC4-203ENST00000447216 UHRF1BP1Q6BDS2 1440 aa26.15■■□□□ 1.78
TRAPPC4-203ENST00000447216 KDM5AP29375 1690 aaKnown RBP26.13■■□□□ 1.77
TRAPPC4-203ENST00000447216 STAG3Q9UJ98 1225 aa26.13■■□□□ 1.77
TRAPPC4-203ENST00000447216 SPATA31E1Q6ZUB1 1445 aa26.13■■□□□ 1.77
TRAPPC4-203ENST00000447216 RGL3Q3MIN7 710 aa26.11■■□□□ 1.77
TRAPPC4-203ENST00000447216 NEURL4Q96JN8 1562 aa26.07■■□□□ 1.76
TRAPPC4-203ENST00000447216 ZNF326Q5BKZ1 582 aaKnown RBP26.07■■□□□ 1.76
TRAPPC4-203ENST00000447216 IFT172Q9UG01 1749 aa26.06■■□□□ 1.76
TRAPPC4-203ENST00000447216 PPLO60437 1756 aa26.06■■□□□ 1.76
TRAPPC4-203ENST00000447216 LMTK3Q96Q04 1460 aa26.04■■□□□ 1.76
TRAPPC4-203ENST00000447216 TONSLQ96HA7 1378 aa26.03■■□□□ 1.76
TRAPPC4-203ENST00000447216 NEXMIFQ5QGS0 1516 aa26.02■■□□□ 1.76
TRAPPC4-203ENST00000447216 THEMISQ8N1K5 641 aaPredicted RBP26.01■■□□□ 1.75
TRAPPC4-203ENST00000447216 RIMS2Q9UQ26 1411 aa26■■□□□ 1.75
TRAPPC4-203ENST00000447216 L3MBTL2Q969R5 705 aa26■■□□□ 1.75
TRAPPC4-203ENST00000447216 NUTM2DQ5VT03 806 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms