RNA–Protein interactions for RNA: ENST00000446276.5

MACF1-208, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-208ENST00000446276 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
MACF1-208ENST00000446276 NUP155O75694 1391 aa17.47■□□□□ 0.39
MACF1-208ENST00000446276 UNC13BO14795 1591 aa17.47■□□□□ 0.39
MACF1-208ENST00000446276 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
MACF1-208ENST00000446276 RNF17Q9BXT8 1623 aaKnown RBP17.46■□□□□ 0.39
MACF1-208ENST00000446276 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.39
MACF1-208ENST00000446276 GGT6Q6P531 493 aa17.45■□□□□ 0.38
MACF1-208ENST00000446276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.381e-8■■■■□ 26.2
MACF1-208ENST00000446276 KDM5DQ9BY66 1539 aa17.45■□□□□ 0.38
MACF1-208ENST00000446276 PRDM15P57071 1507 aaPredicted RBP17.44■□□□□ 0.38
MACF1-208ENST00000446276 MROH1Q8NDA8 1641 aa17.44■□□□□ 0.38
MACF1-208ENST00000446276 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
MACF1-208ENST00000446276 ARID4BQ4LE39 1312 aaPredicted RBP17.43■□□□□ 0.38
MACF1-208ENST00000446276 KANK1Q14678 1352 aa17.43■□□□□ 0.38
MACF1-208ENST00000446276 PZPP20742 1482 aa17.42■□□□□ 0.38
MACF1-208ENST00000446276 VWDEQ8N2E2 1590 aa17.42■□□□□ 0.38
MACF1-208ENST00000446276 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
MACF1-208ENST00000446276 MPHOSPH9Q99550 1183 aa17.42■□□□□ 0.38
MACF1-208ENST00000446276 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
MACF1-208ENST00000446276 IQGAP3Q86VI3 1631 aa17.4■□□□□ 0.38
MACF1-208ENST00000446276 FAM135AQ9P2D6 1515 aa17.4■□□□□ 0.38
MACF1-208ENST00000446276 MLECQ14165 292 aa17.38■□□□□ 0.37
MACF1-208ENST00000446276 WASHC2CQ9Y4E1 1318 aa17.38■□□□□ 0.37
MACF1-208ENST00000446276 LMTK2Q8IWU2 1503 aa17.38■□□□□ 0.37
MACF1-208ENST00000446276 ABCC3O15438 1527 aa17.36■□□□□ 0.37
MACF1-208ENST00000446276 PKD2Q13563 968 aa17.35■□□□□ 0.37
MACF1-208ENST00000446276 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
MACF1-208ENST00000446276 ZC3H13Q5T200 1668 aaKnown RBP17.33■□□□□ 0.36
MACF1-208ENST00000446276 TET3O43151 1660 aa17.33■□□□□ 0.36
MACF1-208ENST00000446276 CEP152O94986 1710 aa17.31■□□□□ 0.36
MACF1-208ENST00000446276 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
MACF1-208ENST00000446276 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
MACF1-208ENST00000446276 EFCAB6Q5THR3 1501 aa17.31■□□□□ 0.36
MACF1-208ENST00000446276 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
MACF1-208ENST00000446276 FOXD1Q16676 465 aa17.3■□□□□ 0.36
MACF1-208ENST00000446276 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
MACF1-208ENST00000446276 RPRD2Q5VT52 1461 aaKnown RBP17.28■□□□□ 0.36
MACF1-208ENST00000446276 NPATQ14207 1427 aa17.28■□□□□ 0.36
MACF1-208ENST00000446276 CAMSAP1Q5T5Y3 1602 aa17.28■□□□□ 0.36
MACF1-208ENST00000446276 ANKRD30BQ9BXX2 1392 aa17.27■□□□□ 0.36
MACF1-208ENST00000446276 E9PCH4 1651 aa17.27■□□□□ 0.36
MACF1-208ENST00000446276 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.35
MACF1-208ENST00000446276 ZMYM3Q14202 1370 aa17.26■□□□□ 0.35
MACF1-208ENST00000446276 ADAMTSL3P82987 1691 aa17.25■□□□□ 0.35
MACF1-208ENST00000446276 PTPRTO14522 1441 aa17.25■□□□□ 0.35
MACF1-208ENST00000446276 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
MACF1-208ENST00000446276 FER1L4A9Z1Z3 1794 aa17.23■□□□□ 0.35
MACF1-208ENST00000446276 MROH2AA6NES4 1674 aa17.23■□□□□ 0.35
MACF1-208ENST00000446276 MADDQ8WXG6 1647 aa17.22■□□□□ 0.35
MACF1-208ENST00000446276 NOS1P29475 1434 aa17.22■□□□□ 0.35
MACF1-208ENST00000446276 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
MACF1-208ENST00000446276 TRPM2O94759 1503 aa17.19■□□□□ 0.34
MACF1-208ENST00000446276 SIN3AQ96ST3 1273 aa17.19■□□□□ 0.34
MACF1-208ENST00000446276 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
MACF1-208ENST00000446276 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
MACF1-208ENST00000446276 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
MACF1-208ENST00000446276 SPATA31D1Q6ZQQ2 1576 aa17.17■□□□□ 0.34
MACF1-208ENST00000446276 CEBPAP49715 358 aaPredicted RBP17.17■□□□□ 0.34
MACF1-208ENST00000446276 RIMS1Q86UR5 1692 aaKnown RBP17.16■□□□□ 0.34
MACF1-208ENST00000446276 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
MACF1-208ENST00000446276 C3P01024 1663 aa17.15■□□□□ 0.34
MACF1-208ENST00000446276 CFAP65Q6ZU64 1925 aaKnown RBP17.15■□□□□ 0.34
MACF1-208ENST00000446276 SLC52A1Q9NWF4 448 aa17.15■□□□□ 0.34
MACF1-208ENST00000446276 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
MACF1-208ENST00000446276 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
MACF1-208ENST00000446276 SYNMO15061 1565 aa17.14■□□□□ 0.33
MACF1-208ENST00000446276 KDM4FA0A1W2PPD8 638 aa17.14■□□□□ 0.33
MACF1-208ENST00000446276 PTPRMP28827 1452 aa17.13■□□□□ 0.33
MACF1-208ENST00000446276 TNRQ92752 1358 aa17.12■□□□□ 0.33
MACF1-208ENST00000446276 IDI1Q13907 227 aa17.11■□□□□ 0.33
MACF1-208ENST00000446276 UGGT1Q9NYU2 1555 aa17.11■□□□□ 0.33
MACF1-208ENST00000446276 CLTCL1P53675 1640 aa17.11■□□□□ 0.33
MACF1-208ENST00000446276 PIK3C2BO00750 1634 aa17.1■□□□□ 0.33
MACF1-208ENST00000446276 TIMELESSQ9UNS1 1208 aa17.1■□□□□ 0.33
MACF1-208ENST00000446276 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
MACF1-208ENST00000446276 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
MACF1-208ENST00000446276 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
MACF1-208ENST00000446276 NEURL4Q96JN8 1562 aa17.06■□□□□ 0.32
MACF1-208ENST00000446276 TONSLQ96HA7 1378 aa17.06■□□□□ 0.32
MACF1-208ENST00000446276 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
MACF1-208ENST00000446276 L3MBTL2Q969R5 705 aa17.03■□□□□ 0.32
MACF1-208ENST00000446276 SETD1BQ9UPS6 1966 aaKnown RBP17.03■□□□□ 0.32
MACF1-208ENST00000446276 ADGRB3O60242 1522 aa17.03■□□□□ 0.32
MACF1-208ENST00000446276 CHGAP10645 457 aaKnown RBP17.03■□□□□ 0.32
MACF1-208ENST00000446276 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
MACF1-208ENST00000446276 KIF1BO60333 1816 aa17.02■□□□□ 0.32
MACF1-208ENST00000446276 TMEM131LA2VDJ0 1609 aa17.01■□□□□ 0.31
MACF1-208ENST00000446276 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
MACF1-208ENST00000446276 A2ML1A8K2U0 1454 aa17■□□□□ 0.31
MACF1-208ENST00000446276 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
MACF1-208ENST00000446276 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
MACF1-208ENST00000446276 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
MACF1-208ENST00000446276 ZNF326Q5BKZ1 582 aaKnown RBP16.98■□□□□ 0.31
MACF1-208ENST00000446276 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
MACF1-208ENST00000446276 DCAF11Q8TEB1 546 aa16.97■□□□□ 0.31
MACF1-208ENST00000446276 PPP1R15AO75807 674 aaPredicted RBP16.97■□□□□ 0.31
MACF1-208ENST00000446276 CEP170BQ9Y4F5 1589 aaPredicted RBP16.96■□□□□ 0.31
MACF1-208ENST00000446276 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.31
MACF1-208ENST00000446276 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.3
MACF1-208ENST00000446276 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms