RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 TNRQ92752 1358 aa22.78■■□□□ 1.24
SHANK2-209ENST00000445654 ANKLE2Q86XL3 938 aa22.78■■□□□ 1.24
SHANK2-209ENST00000445654 NEURL4Q96JN8 1562 aa22.78■■□□□ 1.24
SHANK2-209ENST00000445654 RTEL1-TNFRSF6BF6WH68 1400 aa22.75■■□□□ 1.23
SHANK2-209ENST00000445654 THEMISQ8N1K5 641 aaPredicted RBP22.75■■□□□ 1.23
SHANK2-209ENST00000445654 PZPP20742 1482 aa22.73■■□□□ 1.23
SHANK2-209ENST00000445654 DHX29Q7Z478 1369 aaKnown RBP22.72■■□□□ 1.23
SHANK2-209ENST00000445654 NLRP1Q9C000 1473 aa22.72■■□□□ 1.23
SHANK2-209ENST00000445654 DEPDC5O75140 1603 aa22.71■■□□□ 1.23
SHANK2-209ENST00000445654 MED14O60244 1454 aa22.71■■□□□ 1.23
SHANK2-209ENST00000445654 KDM5DQ9BY66 1539 aa22.71■■□□□ 1.23
SHANK2-209ENST00000445654 VWDEQ8N2E2 1590 aa22.71■■□□□ 1.23
SHANK2-209ENST00000445654 NPHP4O75161 1426 aaPredicted RBP22.69■■□□□ 1.22
SHANK2-209ENST00000445654 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
SHANK2-209ENST00000445654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.67■■□□□ 1.22
SHANK2-209ENST00000445654 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
SHANK2-209ENST00000445654 WASHC2CQ9Y4E1 1318 aa22.65■■□□□ 1.22
SHANK2-209ENST00000445654 SYNMO15061 1565 aa22.65■■□□□ 1.22
SHANK2-209ENST00000445654 KIF3BO15066 747 aa22.65■■□□□ 1.22
SHANK2-209ENST00000445654 FBXO31Q5XUX0 539 aaPredicted RBP22.65■■□□□ 1.22
SHANK2-209ENST00000445654 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
SHANK2-209ENST00000445654 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.22
SHANK2-209ENST00000445654 MBD5Q9P267 1494 aa22.64■■□□□ 1.21
SHANK2-209ENST00000445654 IQGAP1P46940 1657 aa22.64■■□□□ 1.21
SHANK2-209ENST00000445654 ALKQ9UM73 1620 aa22.62■■□□□ 1.21
SHANK2-209ENST00000445654 RSPH4AQ5TD94 716 aa22.62■■□□□ 1.21
SHANK2-209ENST00000445654 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
SHANK2-209ENST00000445654 EHBP1L1Q8N3D4 1523 aa22.58■■□□□ 1.21
SHANK2-209ENST00000445654 LRRC7Q96NW7 1537 aa22.58■■□□□ 1.21
SHANK2-209ENST00000445654 CCDC141Q6ZP82 1450 aa22.58■■□□□ 1.2
SHANK2-209ENST00000445654 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
SHANK2-209ENST00000445654 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
SHANK2-209ENST00000445654 ZC3H13Q5T200 1668 aaKnown RBP22.52■■□□□ 1.2
SHANK2-209ENST00000445654 STRCP1A6NGW2 1772 aa22.5■■□□□ 1.19
SHANK2-209ENST00000445654 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
SHANK2-209ENST00000445654 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
SHANK2-209ENST00000445654 TSPY4P0CV99 314 aa22.48■■□□□ 1.19
SHANK2-209ENST00000445654 TSPY10P0CW01 314 aa22.48■■□□□ 1.19
SHANK2-209ENST00000445654 CAMSAP2Q08AD1 1489 aa22.47■■□□□ 1.19
SHANK2-209ENST00000445654 RGS17Q9UGC6 210 aaPredicted RBP22.45■■□□□ 1.18
SHANK2-209ENST00000445654 ARHGEF5Q12774 1597 aa22.45■■□□□ 1.18
SHANK2-209ENST00000445654 SCAF11Q99590 1463 aaKnown RBP22.44■■□□□ 1.18
SHANK2-209ENST00000445654 ABCC3O15438 1527 aa22.43■■□□□ 1.18
SHANK2-209ENST00000445654 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
SHANK2-209ENST00000445654 FAM135BQ49AJ0 1406 aa22.42■■□□□ 1.18
SHANK2-209ENST00000445654 UBR1Q8IWV7 1749 aa22.41■■□□□ 1.18
SHANK2-209ENST00000445654 EIF2AK4Q9P2K8 1649 aaKnown RBP22.41■■□□□ 1.18
SHANK2-209ENST00000445654 EID1Q9Y6B2 187 aa22.39■■□□□ 1.17
SHANK2-209ENST00000445654 SLIT1O75093 1534 aa22.38■■□□□ 1.17
SHANK2-209ENST00000445654 NCOA2Q15596 1464 aa22.37■■□□□ 1.17
SHANK2-209ENST00000445654 ARHGAP23Q9P227 1491 aa22.36■■□□□ 1.17
SHANK2-209ENST00000445654 TXNDC2Q86VQ3 553 aa22.36■■□□□ 1.17
SHANK2-209ENST00000445654 MAST1Q9Y2H9 1570 aa22.35■■□□□ 1.17
SHANK2-209ENST00000445654 XIRP1Q702N8 1843 aaKnown RBP22.34■■□□□ 1.17
SHANK2-209ENST00000445654 POTEAQ6S8J7 498 aa22.33■■□□□ 1.17
SHANK2-209ENST00000445654 LRRC9Q6ZRR7 1453 aa22.33■■□□□ 1.16
SHANK2-209ENST00000445654 LTKP29376 864 aa22.3■■□□□ 1.16
SHANK2-209ENST00000445654 CEP152O94986 1710 aa22.29■■□□□ 1.16
SHANK2-209ENST00000445654 ARHGAP31Q2M1Z3 1444 aa22.29■■□□□ 1.16
SHANK2-209ENST00000445654 MROH1Q8NDA8 1641 aa22.28■■□□□ 1.16
SHANK2-209ENST00000445654 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
SHANK2-209ENST00000445654 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
SHANK2-209ENST00000445654 CFAP65Q6ZU64 1925 aaKnown RBP22.26■■□□□ 1.15
SHANK2-209ENST00000445654 KCNA6P17658 529 aa22.25■■□□□ 1.15
SHANK2-209ENST00000445654 STAG3Q9UJ98 1225 aa22.25■■□□□ 1.15
SHANK2-209ENST00000445654 KDM5AP29375 1690 aaKnown RBP22.25■■□□□ 1.15
SHANK2-209ENST00000445654 DUOX2Q9NRD8 1548 aa22.25■■□□□ 1.15
SHANK2-209ENST00000445654 TMEM2Q9UHN6 1383 aa22.24■■□□□ 1.15
SHANK2-209ENST00000445654 PROSER2Q86WR7 435 aaPredicted RBP22.22■■□□□ 1.15
SHANK2-209ENST00000445654 JCADQ9P266 1359 aa22.21■■□□□ 1.15
SHANK2-209ENST00000445654 NKTRP30414 1462 aaKnown RBP22.21■■□□□ 1.15
SHANK2-209ENST00000445654 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
SHANK2-209ENST00000445654 PIK3C2BO00750 1634 aa22.2■■□□□ 1.15
SHANK2-209ENST00000445654 MSH6P52701 1360 aa22.19■■□□□ 1.14
SHANK2-209ENST00000445654 EFCAB6Q5THR3 1501 aa22.19■■□□□ 1.14
SHANK2-209ENST00000445654 MAP3K1Q13233 1512 aa22.18■■□□□ 1.14
SHANK2-209ENST00000445654 KANK1Q14678 1352 aa22.18■■□□□ 1.14
SHANK2-209ENST00000445654 ERBINQ96RT1 1412 aa22.17■■□□□ 1.14
SHANK2-209ENST00000445654 SETD1AO15047 1707 aaKnown RBP22.17■■□□□ 1.14
SHANK2-209ENST00000445654 PHLPP1O60346 1717 aa22.17■■□□□ 1.14
SHANK2-209ENST00000445654 MYOM3Q5VTT5 1437 aa22.16■■□□□ 1.14
SHANK2-209ENST00000445654 NWD1Q149M9 1564 aa22.15■■□□□ 1.14
SHANK2-209ENST00000445654 TET3O43151 1660 aa22.14■■□□□ 1.13
SHANK2-209ENST00000445654 ZNF772Q68DY9 489 aaPredicted RBP22.13■■□□□ 1.13
SHANK2-209ENST00000445654 SLAIN2Q9P270 581 aa22.13■■□□□ 1.13
SHANK2-209ENST00000445654 KIF15Q9NS87 1388 aa22.12■■□□□ 1.13
SHANK2-209ENST00000445654 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
SHANK2-209ENST00000445654 SLC26A8Q96RN1 970 aa22.11■■□□□ 1.13
SHANK2-209ENST00000445654 FGD6Q6ZV73 1430 aa22.1■■□□□ 1.13
SHANK2-209ENST00000445654 MEX3CQ5U5Q3 659 aaKnown RBP22.08■■□□□ 1.13
SHANK2-209ENST00000445654 LMTK2Q8IWU2 1503 aa22.07■■□□□ 1.12
SHANK2-209ENST00000445654 IDI1Q13907 227 aa22.07■■□□□ 1.12
SHANK2-209ENST00000445654 UPF1Q92900 1129 aaKnown RBP eCLIP22.07■■□□□ 1.12
SHANK2-209ENST00000445654 BCANQ96GW7 911 aa22.07■■□□□ 1.12
SHANK2-209ENST00000445654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.12
SHANK2-209ENST00000445654 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
SHANK2-209ENST00000445654 ADGRB3O60242 1522 aa22.06■■□□□ 1.12
SHANK2-209ENST00000445654 HDGFP51858 240 aaKnown RBP22.06■■□□□ 1.12
SHANK2-209ENST00000445654 SLC52A1Q9NWF4 448 aa22.05■■□□□ 1.12
SHANK2-209ENST00000445654 COL16A1Q07092 1604 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms