RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 FTSJ3Q8IY81 847 aaKnown RBP3.73□□□□□ -1.81
UBBP3-201ENST00000445497 KRI1Q8N9T8 703 aaKnown RBP3.73□□□□□ -1.81
UBBP3-201ENST00000445497 PCGF6Q9BYE7 350 aa3.73□□□□□ -1.81
UBBP3-201ENST00000445497 ZBTB47Q9UFB7 747 aaPredicted RBP3.73□□□□□ -1.81
UBBP3-201ENST00000445497 STAG3Q9UJ98 1225 aa3.73□□□□□ -1.81
UBBP3-201ENST00000445497 ZNF777Q9ULD5 760 aaPredicted RBP3.73□□□□□ -1.81
UBBP3-201ENST00000445497 CAPN15O75808 1086 aa3.72□□□□□ -1.81
UBBP3-201ENST00000445497 FAM50AQ14320 339 aaKnown RBP3.72□□□□□ -1.81
UBBP3-201ENST00000445497 LONRF3Q496Y0 759 aa3.72□□□□□ -1.81
UBBP3-201ENST00000445497 RBM26Q5T8P6 1007 aaKnown RBP3.72□□□□□ -1.81
UBBP3-201ENST00000445497 WDR78Q5VTH9 848 aa3.72□□□□□ -1.81
UBBP3-201ENST00000445497 WWC1Q8IX03 1113 aa3.72□□□□□ -1.81
UBBP3-201ENST00000445497 MICAL1Q8TDZ2 1067 aa3.72□□□□□ -1.81
UBBP3-201ENST00000445497 NAP1L2Q9ULW6 460 aaPredicted RBP3.72□□□□□ -1.81
UBBP3-201ENST00000445497 SUGT1Q9Y2Z0 365 aa3.72□□□□□ -1.81
UBBP3-201ENST00000445497 UNCXA6NJT0 531 aa3.71□□□□□ -1.82
UBBP3-201ENST00000445497 ZC3H6P61129 1189 aaKnown RBP3.71□□□□□ -1.82
UBBP3-201ENST00000445497 PDE4DQ08499 809 aa3.71□□□□□ -1.82
UBBP3-201ENST00000445497 PLCD3Q8N3E9 789 aa3.71□□□□□ -1.82
UBBP3-201ENST00000445497 ZNF622Q969S3 477 aaKnown RBP eCLIP3.71□□□□□ -1.82
UBBP3-201ENST00000445497 NRDCO43847 1150 aa3.7□□□□□ -1.82
UBBP3-201ENST00000445497 HSP90AA1P07900 732 aaKnown RBP3.7□□□□□ -1.82
UBBP3-201ENST00000445497 ARID4AP29374 1257 aaPredicted RBP3.7□□□□□ -1.82
UBBP3-201ENST00000445497 FAM193AP78312 1265 aa3.7□□□□□ -1.82
UBBP3-201ENST00000445497 CNGB1Q14028 1251 aaPredicted RBP3.7□□□□□ -1.82
UBBP3-201ENST00000445497 MCM6Q14566 821 aa3.7□□□□□ -1.82
UBBP3-201ENST00000445497 AXDND1Q5T1B0 1012 aaPredicted RBP3.7□□□□□ -1.82
UBBP3-201ENST00000445497 CASC1Q6TDU7 716 aa3.7□□□□□ -1.82
UBBP3-201ENST00000445497 APBB1IPQ7Z5R6 666 aaPredicted RBP3.7□□□□□ -1.82
UBBP3-201ENST00000445497 SMC5Q8IY18 1101 aa3.7□□□□□ -1.82
UBBP3-201ENST00000445497 JADE2Q9NQC1 790 aa3.7□□□□□ -1.82
UBBP3-201ENST00000445497 PLSCR2Q9NRY7 297 aa3.7□□□□□ -1.82
UBBP3-201ENST00000445497 RIOK3O14730 519 aaKnown RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 TRIM66O15016 1216 aa3.69□□□□□ -1.82
UBBP3-201ENST00000445497 VGFO15240 615 aaPredicted RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 CSB-PGBD3P0DP91 1061 aa3.69□□□□□ -1.82
UBBP3-201ENST00000445497 NOP9Q86U38 636 aaKnown RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 FNBP4Q8N3X1 1017 aaPredicted RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 SECISBP2LQ93073 1101 aaKnown RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 MRRFQ96E11 262 aaKnown RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 PCMTD1Q96MG8 357 aaPredicted RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 SPINK5Q9NQ38 1064 aaPredicted RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 NOP58Q9Y2X3 529 aaKnown RBP3.69□□□□□ -1.82
UBBP3-201ENST00000445497 STK25O00506 426 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 SEMA3EO15041 775 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 ZRANB2O95218 330 aaKnown RBP eCLIP3.68□□□□□ -1.82
UBBP3-201ENST00000445497 C1QBPQ07021 282 aaKnown RBP3.68□□□□□ -1.82
UBBP3-201ENST00000445497 MYBPC2Q14324 1141 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 HSP90AB2PQ58FF8 381 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 TSHZ1Q6ZSZ6 1077 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 FAM43BQ6ZT52 329 aaPredicted RBP3.68□□□□□ -1.82
UBBP3-201ENST00000445497 CCAR1Q8IX12 1150 aaKnown RBP3.68□□□□□ -1.82
UBBP3-201ENST00000445497 NME8Q8N427 588 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 ANP32BQ92688 251 aaKnown RBP3.68□□□□□ -1.82
UBBP3-201ENST00000445497 TRIM44Q96DX7 344 aaPredicted RBP3.68□□□□□ -1.82
UBBP3-201ENST00000445497 SGSM3Q96HU1 749 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 MTA3Q9BTC8 594 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 FAM117AQ9C073 453 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.68□□□□□ -1.82
UBBP3-201ENST00000445497 TMA7Q9Y2S6 64 aaKnown RBP3.68□□□□□ -1.82
UBBP3-201ENST00000445497 IVNS1ABPQ9Y6Y0 642 aa3.68□□□□□ -1.82
UBBP3-201ENST00000445497 EXOC5O00471 708 aa3.67□□□□□ -1.82
UBBP3-201ENST00000445497 CREB3O43889 395 aa3.67□□□□□ -1.82
UBBP3-201ENST00000445497 RAB11FIP3O75154 756 aa3.67□□□□□ -1.82
UBBP3-201ENST00000445497 B4GALNT3Q6L9W6 998 aa3.67□□□□□ -1.82
UBBP3-201ENST00000445497 KRBA2Q6ZNG9 492 aa3.67□□□□□ -1.82
UBBP3-201ENST00000445497 RINLQ6ZS11 566 aa3.67□□□□□ -1.82
UBBP3-201ENST00000445497 GPIHBP1Q8IV16 184 aa3.67□□□□□ -1.82
UBBP3-201ENST00000445497 PNISRQ8TF01 805 aaKnown RBP3.67□□□□□ -1.82
UBBP3-201ENST00000445497 CCDC85AQ96PX6 553 aaPredicted RBP3.67□□□□□ -1.82
UBBP3-201ENST00000445497 SPDYE2BA6NHP3 402 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 TTC36A6NLP5 189 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 SH3BP5O60239 455 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 SPDYE6P0CI01 402 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 IBSPP21815 317 aaPredicted RBP3.66□□□□□ -1.82
UBBP3-201ENST00000445497 DEKP35659 375 aaKnown RBP3.66□□□□□ -1.82
UBBP3-201ENST00000445497 GSE1Q14687 1217 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 E2F4Q16254 413 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 SPDYE2Q495Y8 402 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 ZFYVE27Q5T4F4 411 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 CEP120Q8N960 986 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 SIRT1Q96EB6 747 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 RNF39Q9H2S5 420 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 NUB1Q9Y5A7 615 aa3.66□□□□□ -1.82
UBBP3-201ENST00000445497 hCG_2014768A0A024R1R8 64 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 PLEKHG3A1L390 1219 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 CCER2I3L3R5 266 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 IGBP1P78318 339 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 SETDB1Q15047 1291 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 NBPF11Q86T75 865 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 FAM9BQ8IZU0 186 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 MIER1Q8N108 512 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 CACTIN-AS1Q8N1I8 211 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 SDR16C5Q8N3Y7 309 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 CXorf38Q8TB03 319 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 PBXIP1Q96AQ6 731 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 KIAA1522Q9P206 1035 aaPredicted RBP3.65□□□□□ -1.83
UBBP3-201ENST00000445497 PPP1R1BQ9UD71 204 aaPredicted RBP3.65□□□□□ -1.83
UBBP3-201ENST00000445497 COMMD10Q9Y6G5 202 aa3.65□□□□□ -1.83
UBBP3-201ENST00000445497 CCDC194A0A1B0GVG4 234 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms