RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 RNF17Q9BXT8 1623 aaKnown RBP22.52■■□□□ 1.2
CCNE1-203ENST00000444983 MROH1Q8NDA8 1641 aa22.52■■□□□ 1.2
CCNE1-203ENST00000444983 KIF3BO15066 747 aa22.51■■□□□ 1.19
CCNE1-203ENST00000444983 KDM5DQ9BY66 1539 aa22.49■■□□□ 1.19
CCNE1-203ENST00000444983 PRDM15P57071 1507 aaPredicted RBP22.48■■□□□ 1.19
CCNE1-203ENST00000444983 VWDEQ8N2E2 1590 aa22.47■■□□□ 1.19
CCNE1-203ENST00000444983 NUP155O75694 1391 aa22.44■■□□□ 1.18
CCNE1-203ENST00000444983 IQGAP3Q86VI3 1631 aa22.44■■□□□ 1.18
CCNE1-203ENST00000444983 PZPP20742 1482 aa22.43■■□□□ 1.18
CCNE1-203ENST00000444983 TRIM52Q96A61 297 aa22.41■■□□□ 1.18
CCNE1-203ENST00000444983 FAM135AQ9P2D6 1515 aa22.41■■□□□ 1.18
CCNE1-203ENST00000444983 GGT6Q6P531 493 aa22.4■■□□□ 1.18
CCNE1-203ENST00000444983 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
CCNE1-203ENST00000444983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.173e-7■■■■■ 28.6
CCNE1-203ENST00000444983 LMTK2Q8IWU2 1503 aa22.38■■□□□ 1.17
CCNE1-203ENST00000444983 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
CCNE1-203ENST00000444983 MPHOSPH9Q99550 1183 aa22.37■■□□□ 1.17
CCNE1-203ENST00000444983 KANK1Q14678 1352 aa22.36■■□□□ 1.17
CCNE1-203ENST00000444983 ABCC3O15438 1527 aa22.36■■□□□ 1.17
CCNE1-203ENST00000444983 ZC3H13Q5T200 1668 aaKnown RBP22.35■■□□□ 1.17
CCNE1-203ENST00000444983 ARID4BQ4LE39 1312 aaPredicted RBP22.35■■□□□ 1.17
CCNE1-203ENST00000444983 CEP152O94986 1710 aa22.34■■□□□ 1.17
CCNE1-203ENST00000444983 TET3O43151 1660 aa22.34■■□□□ 1.17
CCNE1-203ENST00000444983 SLC4A1APQ9BWU0 796 aaKnown RBP22.33■■□□□ 1.17
CCNE1-203ENST00000444983 WASHC2CQ9Y4E1 1318 aa22.32■■□□□ 1.16
CCNE1-203ENST00000444983 MLECQ14165 292 aa22.31■■□□□ 1.16
CCNE1-203ENST00000444983 EFCAB6Q5THR3 1501 aa22.3■■□□□ 1.16
CCNE1-203ENST00000444983 E9PCH4 1651 aa22.29■■□□□ 1.16
CCNE1-203ENST00000444983 CAMSAP1Q5T5Y3 1602 aa22.29■■□□□ 1.16
CCNE1-203ENST00000444983 PKD2Q13563 968 aa22.28■■□□□ 1.16
CCNE1-203ENST00000444983 ADAMTSL3P82987 1691 aa22.27■■□□□ 1.16
CCNE1-203ENST00000444983 CLTCQ00610 1675 aaKnown RBP22.27■■□□□ 1.16
CCNE1-203ENST00000444983 ARHGAP31Q2M1Z3 1444 aa22.27■■□□□ 1.16
CCNE1-203ENST00000444983 RPRD2Q5VT52 1461 aaKnown RBP22.25■■□□□ 1.15
CCNE1-203ENST00000444983 NPATQ14207 1427 aa22.24■■□□□ 1.15
CCNE1-203ENST00000444983 MROH2AA6NES4 1674 aa22.24■■□□□ 1.15
CCNE1-203ENST00000444983 FER1L4A9Z1Z3 1794 aa22.24■■□□□ 1.15
CCNE1-203ENST00000444983 CNTLNQ9NXG0 1405 aa22.24■■□□□ 1.15
CCNE1-203ENST00000444983 FOXD1Q16676 465 aa22.23■■□□□ 1.15
CCNE1-203ENST00000444983 ANKRD30BQ9BXX2 1392 aa22.22■■□□□ 1.15
CCNE1-203ENST00000444983 CLSPNQ9HAW4 1339 aa22.22■■□□□ 1.15
CCNE1-203ENST00000444983 MADDQ8WXG6 1647 aa22.21■■□□□ 1.15
CCNE1-203ENST00000444983 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.15
CCNE1-203ENST00000444983 PLA2R1Q13018 1463 aa22.2■■□□□ 1.14
CCNE1-203ENST00000444983 ZMYM3Q14202 1370 aa22.2■■□□□ 1.14
CCNE1-203ENST00000444983 PTPRTO14522 1441 aa22.2■■□□□ 1.14
CCNE1-203ENST00000444983 ESF1Q9H501 851 aaKnown RBP22.17■■□□□ 1.14
CCNE1-203ENST00000444983 SPHKAPQ2M3C7 1700 aa22.16■■□□□ 1.14
CCNE1-203ENST00000444983 NOS1P29475 1434 aa22.16■■□□□ 1.14
CCNE1-203ENST00000444983 C3P01024 1663 aa22.15■■□□□ 1.14
CCNE1-203ENST00000444983 PREX1Q8TCU6 1659 aa22.15■■□□□ 1.14
CCNE1-203ENST00000444983 CFAP65Q6ZU64 1925 aaKnown RBP22.14■■□□□ 1.14
CCNE1-203ENST00000444983 TRPM2O94759 1503 aa22.13■■□□□ 1.13
CCNE1-203ENST00000444983 RIMS1Q86UR5 1692 aaKnown RBP22.13■■□□□ 1.13
CCNE1-203ENST00000444983 SPATA31D1Q6ZQQ2 1576 aa22.12■■□□□ 1.13
CCNE1-203ENST00000444983 ERVK-7P63135 1459 aa22.11■■□□□ 1.13
CCNE1-203ENST00000444983 FBXO31Q5XUX0 539 aaPredicted RBP22.11■■□□□ 1.13
CCNE1-203ENST00000444983 SYNMO15061 1565 aa22.1■■□□□ 1.13
CCNE1-203ENST00000444983 SIN3AQ96ST3 1273 aa22.07■■□□□ 1.12
CCNE1-203ENST00000444983 PIK3C2BO00750 1634 aa22.07■■□□□ 1.12
CCNE1-203ENST00000444983 CEBPAP49715 358 aaPredicted RBP22.07■■□□□ 1.12
CCNE1-203ENST00000444983 KDM4FA0A1W2PPD8 638 aa22.06■■□□□ 1.12
CCNE1-203ENST00000444983 CLTCL1P53675 1640 aa22.06■■□□□ 1.12
CCNE1-203ENST00000444983 PTPRMP28827 1452 aa22.06■■□□□ 1.12
CCNE1-203ENST00000444983 CCDC144AA2RUR9 1427 aa22.05■■□□□ 1.12
CCNE1-203ENST00000444983 UGGT1Q9NYU2 1555 aa22.05■■□□□ 1.12
CCNE1-203ENST00000444983 SLC52A1Q9NWF4 448 aa22.01■■□□□ 1.11
CCNE1-203ENST00000444983 NEURL4Q96JN8 1562 aa21.99■■□□□ 1.11
CCNE1-203ENST00000444983 IDI1Q13907 227 aa21.99■■□□□ 1.11
CCNE1-203ENST00000444983 TNRQ92752 1358 aa21.99■■□□□ 1.11
CCNE1-203ENST00000444983 SPATA31E1Q6ZUB1 1445 aa21.98■■□□□ 1.11
CCNE1-203ENST00000444983 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
CCNE1-203ENST00000444983 KIF1BO60333 1816 aa21.97■■□□□ 1.11
CCNE1-203ENST00000444983 SETD1BQ9UPS6 1966 aaKnown RBP21.96■■□□□ 1.11
CCNE1-203ENST00000444983 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
CCNE1-203ENST00000444983 NLRP1Q9C000 1473 aa21.94■■□□□ 1.1
CCNE1-203ENST00000444983 ADGRB3O60242 1522 aa21.94■■□□□ 1.1
CCNE1-203ENST00000444983 TMEM131LA2VDJ0 1609 aa21.94■■□□□ 1.1
CCNE1-203ENST00000444983 KDM5AP29375 1690 aaKnown RBP21.93■■□□□ 1.1
CCNE1-203ENST00000444983 MYO3AQ8NEV4 1616 aa21.92■■□□□ 1.1
CCNE1-203ENST00000444983 PLPPR3Q6T4P5 718 aa21.91■■□□□ 1.1
CCNE1-203ENST00000444983 MYO5BQ9ULV0 1848 aa21.89■■□□□ 1.09
CCNE1-203ENST00000444983 UBR1Q8IWV7 1749 aa21.89■■□□□ 1.09
CCNE1-203ENST00000444983 A2ML1A8K2U0 1454 aa21.88■■□□□ 1.09
CCNE1-203ENST00000444983 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
CCNE1-203ENST00000444983 TONSLQ96HA7 1378 aa21.87■■□□□ 1.09
CCNE1-203ENST00000444983 ZNF142P52746 1687 aaPredicted RBP21.87■■□□□ 1.09
CCNE1-203ENST00000444983 CEP170BQ9Y4F5 1589 aaPredicted RBP21.85■■□□□ 1.09
CCNE1-203ENST00000444983 IFT172Q9UG01 1749 aa21.85■■□□□ 1.09
CCNE1-203ENST00000444983 RGL3Q3MIN7 710 aa21.85■■□□□ 1.09
CCNE1-203ENST00000444983 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.09
CCNE1-203ENST00000444983 PPLO60437 1756 aa21.82■■□□□ 1.08
CCNE1-203ENST00000444983 CHGAP10645 457 aaKnown RBP21.82■■□□□ 1.08
CCNE1-203ENST00000444983 RPGRIP1LQ68CZ1 1315 aa21.81■■□□□ 1.08
CCNE1-203ENST00000444983 NEXMIFQ5QGS0 1516 aa21.81■■□□□ 1.08
CCNE1-203ENST00000444983 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
CCNE1-203ENST00000444983 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
CCNE1-203ENST00000444983 DCAF11Q8TEB1 546 aa21.79■■□□□ 1.08
CCNE1-203ENST00000444983 STAC3Q96MF2 364 aa21.79■■□□□ 1.08
CCNE1-203ENST00000444983 STAG3Q9UJ98 1225 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 224.8 ms