RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 TNRQ92752 1358 aa14.9□□□□□ -0.02
LINC00642-203ENST00000444942 ARHGAP35Q9NRY4 1499 aa14.9□□□□□ -0.02
LINC00642-203ENST00000444942 ZC3H13Q5T200 1668 aaKnown RBP14.9□□□□□ -0.02
LINC00642-203ENST00000444942 GGT6Q6P531 493 aa14.89□□□□□ -0.03
LINC00642-203ENST00000444942 THEMISQ8N1K5 641 aaPredicted RBP14.89□□□□□ -0.03
LINC00642-203ENST00000444942 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
LINC00642-203ENST00000444942 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
LINC00642-203ENST00000444942 UGGT1Q9NYU2 1555 aa14.88□□□□□ -0.03
LINC00642-203ENST00000444942 ATP7AQ04656 1500 aa14.88□□□□□ -0.03
LINC00642-203ENST00000444942 A2MP01023 1474 aa14.88□□□□□ -0.03
LINC00642-203ENST00000444942 CLIP1P30622 1438 aa14.88□□□□□ -0.03
LINC00642-203ENST00000444942 CDC42BPAQ5VT25 1732 aa14.87□□□□□ -0.03
LINC00642-203ENST00000444942 INO80Q9ULG1 1556 aaPredicted RBP14.86□□□□□ -0.03
LINC00642-203ENST00000444942 FAM135AQ9P2D6 1515 aa14.86□□□□□ -0.03
LINC00642-203ENST00000444942 SPAG9O60271 1321 aaKnown RBP14.85□□□□□ -0.03
LINC00642-203ENST00000444942 NLRP1Q9C000 1473 aa14.84□□□□□ -0.03
LINC00642-203ENST00000444942 ADGBQ8N7X0 1667 aa14.84□□□□□ -0.03
LINC00642-203ENST00000444942 PHLPP1O60346 1717 aa14.84□□□□□ -0.03
LINC00642-203ENST00000444942 LRRIQ1Q96JM4 1722 aa14.84□□□□□ -0.03
LINC00642-203ENST00000444942 CDK12Q9NYV4 1490 aaPredicted RBP14.84□□□□□ -0.03
LINC00642-203ENST00000444942 FBXO31Q5XUX0 539 aaPredicted RBP14.84□□□□□ -0.03
LINC00642-203ENST00000444942 PZPP20742 1482 aa14.83□□□□□ -0.04
LINC00642-203ENST00000444942 ZNF772Q68DY9 489 aaPredicted RBP14.83□□□□□ -0.04
LINC00642-203ENST00000444942 SYCP2Q9BX26 1530 aa14.82□□□□□ -0.04
LINC00642-203ENST00000444942 JCADQ9P266 1359 aa14.82□□□□□ -0.04
LINC00642-203ENST00000444942 KDM5DQ9BY66 1539 aa14.81□□□□□ -0.04
LINC00642-203ENST00000444942 FMN1Q68DA7 1419 aa14.79□□□□□ -0.04
LINC00642-203ENST00000444942 MIA2Q96PC5 1412 aa14.79□□□□□ -0.04
LINC00642-203ENST00000444942 LRP6O75581 1613 aa14.79□□□□□ -0.04
LINC00642-203ENST00000444942 RXRBP28702 533 aa14.78□□□□□ -0.04
LINC00642-203ENST00000444942 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
LINC00642-203ENST00000444942 LRRC9Q6ZRR7 1453 aa14.77□□□□□ -0.04
LINC00642-203ENST00000444942 SETBP1Q9Y6X0 1596 aa14.77□□□□□ -0.05
LINC00642-203ENST00000444942 COL16A1Q07092 1604 aaPredicted RBP14.75□□□□□ -0.05
LINC00642-203ENST00000444942 HNRNPMP52272 730 aaKnown RBP eCLIP14.73□□□□□ -0.05
LINC00642-203ENST00000444942 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
LINC00642-203ENST00000444942 SPATA31A6Q5VVP1 1343 aa14.73□□□□□ -0.05
LINC00642-203ENST00000444942 MAP3K1Q13233 1512 aa14.73□□□□□ -0.05
LINC00642-203ENST00000444942 MEX3CQ5U5Q3 659 aaKnown RBP14.73□□□□□ -0.05
LINC00642-203ENST00000444942 FOXD1Q16676 465 aa14.72□□□□□ -0.05
LINC00642-203ENST00000444942 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
LINC00642-203ENST00000444942 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
LINC00642-203ENST00000444942 TMEM94Q12767 1356 aa14.71□□□□□ -0.05
LINC00642-203ENST00000444942 SHPRHQ149N8 1683 aa14.71□□□□□ -0.05
LINC00642-203ENST00000444942 SCAF11Q99590 1463 aaKnown RBP14.71□□□□□ -0.05
LINC00642-203ENST00000444942 FGD6Q6ZV73 1430 aa14.7□□□□□ -0.06
LINC00642-203ENST00000444942 KIAA1107Q9UPP5 1409 aa14.7□□□□□ -0.06
LINC00642-203ENST00000444942 RGS12O14924 1447 aa14.69□□□□□ -0.06
LINC00642-203ENST00000444942 CASKIN1Q8WXD9 1431 aa14.69□□□□□ -0.06
LINC00642-203ENST00000444942 PLEKHH2Q8IVE3 1493 aa14.68□□□□□ -0.06
LINC00642-203ENST00000444942 FYCO1Q9BQS8 1478 aa14.66□□□□□ -0.06
LINC00642-203ENST00000444942 TIAM1Q13009 1591 aa14.65□□□□□ -0.06
LINC00642-203ENST00000444942 GPATCH8Q9UKJ3 1502 aaKnown RBP14.65□□□□□ -0.06
LINC00642-203ENST00000444942 DHX29Q7Z478 1369 aaKnown RBP14.65□□□□□ -0.06
LINC00642-203ENST00000444942 WASHC2CQ9Y4E1 1318 aa14.65□□□□□ -0.06
LINC00642-203ENST00000444942 SLIT1O75093 1534 aa14.64□□□□□ -0.07
LINC00642-203ENST00000444942 ARHGAP23Q9P227 1491 aa14.64□□□□□ -0.07
LINC00642-203ENST00000444942 LTKP29376 864 aa14.63□□□□□ -0.07
LINC00642-203ENST00000444942 RBM33Q96EV2 1170 aaKnown RBP14.63□□□□□ -0.07
LINC00642-203ENST00000444942 SLAIN2Q9P270 581 aa14.63□□□□□ -0.07
LINC00642-203ENST00000444942 LRP5O75197 1615 aa14.62□□□□□ -0.07
LINC00642-203ENST00000444942 NUTM2BA6NNL0 878 aaPredicted RBP14.62□□□□□ -0.07
LINC00642-203ENST00000444942 NUTM2EB1AL46 878 aaPredicted RBP14.62□□□□□ -0.07
LINC00642-203ENST00000444942 KIF3BO15066 747 aa14.62□□□□□ -0.07
LINC00642-203ENST00000444942 NUTM2DQ5VT03 806 aaPredicted RBP14.62□□□□□ -0.07
LINC00642-203ENST00000444942 NUTM2AQ8IVF1 878 aaPredicted RBP14.62□□□□□ -0.07
LINC00642-203ENST00000444942 PRDM15P57071 1507 aaPredicted RBP14.62□□□□□ -0.07
LINC00642-203ENST00000444942 CCDC18Q5T9S5 1454 aa14.62□□□□□ -0.07
LINC00642-203ENST00000444942 NCOA2Q15596 1464 aa14.61□□□□□ -0.07
LINC00642-203ENST00000444942 CFAP65Q6ZU64 1925 aaKnown RBP14.61□□□□□ -0.07
LINC00642-203ENST00000444942 RTEL1-TNFRSF6BF6WH68 1400 aa14.61□□□□□ -0.07
LINC00642-203ENST00000444942 ATAD2Q6PL18 1390 aa14.61□□□□□ -0.07
LINC00642-203ENST00000444942 TXNDC2Q86VQ3 553 aa14.6□□□□□ -0.07
LINC00642-203ENST00000444942 PROSER2Q86WR7 435 aaPredicted RBP14.6□□□□□ -0.07
LINC00642-203ENST00000444942 MSH6P52701 1360 aa14.6□□□□□ -0.07
LINC00642-203ENST00000444942 ABCC3O15438 1527 aa14.6□□□□□ -0.07
LINC00642-203ENST00000444942 AFF2P51816 1311 aa14.6□□□□□ -0.07
LINC00642-203ENST00000444942 KCNA6P17658 529 aa14.6□□□□□ -0.07
LINC00642-203ENST00000444942 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
LINC00642-203ENST00000444942 NKTRP30414 1462 aaKnown RBP14.59□□□□□ -0.07
LINC00642-203ENST00000444942 ERVK-7P63135 1459 aa14.59□□□□□ -0.07
LINC00642-203ENST00000444942 RBM6P78332 1123 aaKnown RBP14.59□□□□□ -0.07
LINC00642-203ENST00000444942 EP400Q96L91 3159 aa14.59□□□□□ -0.07
LINC00642-203ENST00000444942 NWD1Q149M9 1564 aa14.59□□□□□ -0.07
LINC00642-203ENST00000444942 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.08
LINC00642-203ENST00000444942 DIP2AQ14689 1571 aa14.57□□□□□ -0.08
LINC00642-203ENST00000444942 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
LINC00642-203ENST00000444942 CFDP1Q9UEE9 299 aaPredicted RBP14.55□□□□□ -0.08
LINC00642-203ENST00000444942 MBD5Q9P267 1494 aa14.54□□□□□ -0.08
LINC00642-203ENST00000444942 QTRT2Q9H974 415 aaKnown RBP14.54□□□□□ -0.08
LINC00642-203ENST00000444942 EID1Q9Y6B2 187 aa14.54□□□□□ -0.08
LINC00642-203ENST00000444942 TET3O43151 1660 aa14.53□□□□□ -0.08
LINC00642-203ENST00000444942 MTUS2Q5JR59 1369 aa14.53□□□□□ -0.08
LINC00642-203ENST00000444942 CAMSAP2Q08AD1 1489 aa14.52□□□□□ -0.09
LINC00642-203ENST00000444942 IFFO2Q5TF58 517 aa14.5□□□□□ -0.09
LINC00642-203ENST00000444942 CCDC125Q86Z20 511 aa14.5□□□□□ -0.09
LINC00642-203ENST00000444942 NGLY1Q96IV0 654 aa14.49□□□□□ -0.09
LINC00642-203ENST00000444942 PIK3C2BO00750 1634 aa14.49□□□□□ -0.09
LINC00642-203ENST00000444942 CHD2O14647 1828 aaKnown RBP14.49□□□□□ -0.09
LINC00642-203ENST00000444942 CEP152O94986 1710 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms