RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 CHIC2Q9UKJ5 165 aa34.5■■■■□ 3.11
LMBR1-211ENST00000444719 SHANK2Q9UPX8 1470 aa34.5■■■■□ 3.11
LMBR1-211ENST00000444719 WASHC2CQ9Y4E1 1318 aa34.49■■■■□ 3.11
LMBR1-211ENST00000444719 PTPRKQ15262 1439 aa34.47■■■■□ 3.11
LMBR1-211ENST00000444719 KDM5DQ9BY66 1539 aa34.46■■■■□ 3.11
LMBR1-211ENST00000444719 DUOX2Q9NRD8 1548 aa34.46■■■■□ 3.11
LMBR1-211ENST00000444719 KIF15Q9NS87 1388 aa34.46■■■■□ 3.11
LMBR1-211ENST00000444719 EIF2AK4Q9P2K8 1649 aaKnown RBP34.44■■■■□ 3.1
LMBR1-211ENST00000444719 RNF17Q9BXT8 1623 aaKnown RBP34.44■■■■□ 3.1
LMBR1-211ENST00000444719 STRCQ7RTU9 1775 aa34.42■■■■□ 3.1
LMBR1-211ENST00000444719 FBXO31Q5XUX0 539 aaPredicted RBP34.39■■■■□ 3.1
LMBR1-211ENST00000444719 FAM135AQ9P2D6 1515 aa34.39■■■■□ 3.1
LMBR1-211ENST00000444719 MYO3AQ8NEV4 1616 aa34.37■■■■□ 3.09
LMBR1-211ENST00000444719 ANKRD30AQ9BXX3 1397 aa34.36■■■■□ 3.09
LMBR1-211ENST00000444719 MROH1Q8NDA8 1641 aa34.35■■■■□ 3.09
LMBR1-211ENST00000444719 PZPP20742 1482 aa34.33■■■■□ 3.09
LMBR1-211ENST00000444719 CEP152O94986 1710 aa34.33■■■■□ 3.09
LMBR1-211ENST00000444719 ERBINQ96RT1 1412 aa34.32■■■■□ 3.08
LMBR1-211ENST00000444719 ABCC3O15438 1527 aa34.32■■■■□ 3.08
LMBR1-211ENST00000444719 NCOA1Q15788 1441 aa34.31■■■■□ 3.08
LMBR1-211ENST00000444719 CFAP65Q6ZU64 1925 aaKnown RBP34.31■■■■□ 3.08
LMBR1-211ENST00000444719 ZC3H13Q5T200 1668 aaKnown RBP34.31■■■■□ 3.08
LMBR1-211ENST00000444719 ZNF142P52746 1687 aaPredicted RBP34.3■■■■□ 3.08
LMBR1-211ENST00000444719 CEP170BQ9Y4F5 1589 aaPredicted RBP34.29■■■■□ 3.08
LMBR1-211ENST00000444719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.29■■■■□ 3.081e-8■■■□□ 15.2
LMBR1-211ENST00000444719 CAMSAP1Q5T5Y3 1602 aa34.29■■■■□ 3.08
LMBR1-211ENST00000444719 TNRQ92752 1358 aa34.28■■■■□ 3.08
LMBR1-211ENST00000444719 ILDR1Q86SU0 546 aaPredicted RBP34.26■■■■□ 3.08
LMBR1-211ENST00000444719 DMRT2Q9Y5R5 561 aa34.26■■■■□ 3.08
LMBR1-211ENST00000444719 ADGRL2O95490 1459 aa34.25■■■■□ 3.07
LMBR1-211ENST00000444719 PRDM15P57071 1507 aaPredicted RBP34.21■■■■□ 3.07
LMBR1-211ENST00000444719 DEPDC5O75140 1603 aa34.21■■■■□ 3.07
LMBR1-211ENST00000444719 A2ML1A8K2U0 1454 aa34.2■■■■□ 3.07
LMBR1-211ENST00000444719 ITGAEP38570 1179 aa34.2■■■■□ 3.07
LMBR1-211ENST00000444719 NCKAP5LQ9HCH0 1330 aa34.2■■■■□ 3.07
LMBR1-211ENST00000444719 KANK1Q14678 1352 aa34.15■■■■□ 3.06
LMBR1-211ENST00000444719 PTPRTO14522 1441 aa34.14■■■■□ 3.06
LMBR1-211ENST00000444719 ANKRD50Q9ULJ7 1429 aa34.13■■■■□ 3.05
LMBR1-211ENST00000444719 ERVK-7P63135 1459 aa34.12■■■■□ 3.05
LMBR1-211ENST00000444719 SPATA31D1Q6ZQQ2 1576 aa34.11■■■■□ 3.05
LMBR1-211ENST00000444719 PLA2R1Q13018 1463 aa34.1■■■■□ 3.05
LMBR1-211ENST00000444719 NLRP1Q9C000 1473 aa34.09■■■■□ 3.05
LMBR1-211ENST00000444719 PKD2Q13563 968 aa34.07■■■■□ 3.04
LMBR1-211ENST00000444719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.07■■■■□ 3.044e-7■■■■□ 21.6
LMBR1-211ENST00000444719 CERKQ8TCT0 537 aa34.05■■■■□ 3.04
LMBR1-211ENST00000444719 VWDEQ8N2E2 1590 aa34.05■■■■□ 3.04
LMBR1-211ENST00000444719 UGGT1Q9NYU2 1555 aa34.05■■■■□ 3.04
LMBR1-211ENST00000444719 ARHGAP31Q2M1Z3 1444 aa34.04■■■■□ 3.04
LMBR1-211ENST00000444719 ROCK1Q13464 1354 aa34.03■■■■□ 3.04
LMBR1-211ENST00000444719 THEMISQ8N1K5 641 aaPredicted RBP34.03■■■■□ 3.04
LMBR1-211ENST00000444719 FBXO41Q8TF61 875 aa34.02■■■■□ 3.04
LMBR1-211ENST00000444719 LMTK2Q8IWU2 1503 aa34■■■■□ 3.03
LMBR1-211ENST00000444719 POLR1AO95602 1720 aaPredicted RBP33.99■■■■□ 3.03
LMBR1-211ENST00000444719 RRBP1Q9P2E9 1410 aaKnown RBP33.98■■■■□ 3.03
LMBR1-211ENST00000444719 ANKLE2Q86XL3 938 aa33.94■■■■□ 3.02
LMBR1-211ENST00000444719 EFCAB6Q5THR3 1501 aa33.94■■■■□ 3.02
LMBR1-211ENST00000444719 UBR1Q8IWV7 1749 aa33.93■■■■□ 3.02
LMBR1-211ENST00000444719 UNC13BO14795 1591 aa33.91■■■■□ 3.02
LMBR1-211ENST00000444719 NEURL4Q96JN8 1562 aa33.9■■■■□ 3.02
LMBR1-211ENST00000444719 LTBP4Q8N2S1 1624 aa33.89■■■■□ 3.02
LMBR1-211ENST00000444719 ZNF335Q9H4Z2 1342 aaPredicted RBP33.88■■■■□ 3.01
LMBR1-211ENST00000444719 TET3O43151 1660 aa33.87■■■■□ 3.01
LMBR1-211ENST00000444719 PIK3C2BO00750 1634 aa33.86■■■■□ 3.01
LMBR1-211ENST00000444719 SYNMO15061 1565 aa33.85■■■■□ 3.01
LMBR1-211ENST00000444719 GCC2Q8IWJ2 1684 aa33.84■■■■□ 3.01
LMBR1-211ENST00000444719 IDI1Q13907 227 aa33.83■■■■□ 3.01
LMBR1-211ENST00000444719 STAG3Q9UJ98 1225 aa33.83■■■■□ 3.01
LMBR1-211ENST00000444719 NOS1P29475 1434 aa33.81■■■■□ 3
LMBR1-211ENST00000444719 NUP155O75694 1391 aa33.8■■■■□ 3
LMBR1-211ENST00000444719 NPHP4O75161 1426 aaPredicted RBP33.79■■■■□ 3
LMBR1-211ENST00000444719 IQGAP3Q86VI3 1631 aa33.79■■■■□ 3
LMBR1-211ENST00000444719 RPRD2Q5VT52 1461 aaKnown RBP33.78■■■■□ 3
LMBR1-211ENST00000444719 E9PCH4 1651 aa33.77■■■■□ 3
LMBR1-211ENST00000444719 IQGAP1P46940 1657 aa33.77■■■■□ 3
LMBR1-211ENST00000444719 MED14O60244 1454 aa33.76■■■■□ 3
LMBR1-211ENST00000444719 LTKP29376 864 aa33.74■■■□□ 2.99
LMBR1-211ENST00000444719 TXNDC2Q86VQ3 553 aa33.74■■■□□ 2.99
LMBR1-211ENST00000444719 SLC52A1Q9NWF4 448 aa33.72■■■□□ 2.99
LMBR1-211ENST00000444719 SLIT1O75093 1534 aa33.72■■■□□ 2.99
LMBR1-211ENST00000444719 NAIPQ13075 1403 aa33.71■■■□□ 2.99
LMBR1-211ENST00000444719 ARHGAP23Q9P227 1491 aa33.71■■■□□ 2.99
LMBR1-211ENST00000444719 KDM5AP29375 1690 aaKnown RBP33.71■■■□□ 2.99
LMBR1-211ENST00000444719 SCAF11Q99590 1463 aaKnown RBP33.7■■■□□ 2.99
LMBR1-211ENST00000444719 EID1Q9Y6B2 187 aa33.69■■■□□ 2.98
LMBR1-211ENST00000444719 TMEM2Q9UHN6 1383 aa33.69■■■□□ 2.98
LMBR1-211ENST00000444719 MYO5BQ9ULV0 1848 aa33.68■■■□□ 2.98
LMBR1-211ENST00000444719 ADGRB3O60242 1522 aa33.66■■■□□ 2.98
LMBR1-211ENST00000444719 IQSEC2Q5JU85 1478 aa33.63■■■□□ 2.97
LMBR1-211ENST00000444719 HFM1A2PYH4 1435 aa33.61■■■□□ 2.97
LMBR1-211ENST00000444719 CHGAP10645 457 aaKnown RBP33.6■■■□□ 2.97
LMBR1-211ENST00000444719 TRIM52Q96A61 297 aa33.58■■■□□ 2.97
LMBR1-211ENST00000444719 TMEM131LA2VDJ0 1609 aa33.57■■■□□ 2.97
LMBR1-211ENST00000444719 CPS1P31327 1500 aa33.57■■■□□ 2.96
LMBR1-211ENST00000444719 STRCP1A6NGW2 1772 aa33.57■■■□□ 2.96
LMBR1-211ENST00000444719 SENP3Q9H4L4 574 aaPredicted RBP33.54■■■□□ 2.96
LMBR1-211ENST00000444719 SPHKAPQ2M3C7 1700 aa33.53■■■□□ 2.96
LMBR1-211ENST00000444719 UBAP1LF5GYI3 381 aa33.52■■■□□ 2.96
LMBR1-211ENST00000444719 BCANQ96GW7 911 aa33.49■■■□□ 2.95
LMBR1-211ENST00000444719 SLC26A8Q96RN1 970 aa33.48■■■□□ 2.95
LMBR1-211ENST00000444719 RIMS2Q9UQ26 1411 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms