RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 WASHC2CQ9Y4E1 1318 aa20.79■□□□□ 0.92
GARNL3-208ENST00000444677 SETD1BQ9UPS6 1966 aaKnown RBP20.79■□□□□ 0.92
GARNL3-208ENST00000444677 ITGAEP38570 1179 aa20.79■□□□□ 0.92
GARNL3-208ENST00000444677 ANKRD30AQ9BXX3 1397 aa20.78■□□□□ 0.92
GARNL3-208ENST00000444677 ILDR1Q86SU0 546 aaPredicted RBP20.78■□□□□ 0.92
GARNL3-208ENST00000444677 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
GARNL3-208ENST00000444677 UHRF1BP1Q6BDS2 1440 aa20.78■□□□□ 0.92
GARNL3-208ENST00000444677 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
GARNL3-208ENST00000444677 DUOX2Q9NRD8 1548 aa20.76■□□□□ 0.91
GARNL3-208ENST00000444677 STRCQ7RTU9 1775 aa20.75■□□□□ 0.91
GARNL3-208ENST00000444677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.74■□□□□ 0.91
GARNL3-208ENST00000444677 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
GARNL3-208ENST00000444677 MYO3AQ8NEV4 1616 aa20.72■□□□□ 0.91
GARNL3-208ENST00000444677 ERBINQ96RT1 1412 aa20.71■□□□□ 0.91
GARNL3-208ENST00000444677 ADGRL2O95490 1459 aa20.71■□□□□ 0.91
GARNL3-208ENST00000444677 NPATQ14207 1427 aa20.7■□□□□ 0.9
GARNL3-208ENST00000444677 KDM5DQ9BY66 1539 aa20.69■□□□□ 0.9
GARNL3-208ENST00000444677 ZNF142P52746 1687 aaPredicted RBP20.68■□□□□ 0.9
GARNL3-208ENST00000444677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
GARNL3-208ENST00000444677 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
GARNL3-208ENST00000444677 MROH1Q8NDA8 1641 aa20.67■□□□□ 0.9
GARNL3-208ENST00000444677 ABCC3O15438 1527 aa20.66■□□□□ 0.9
GARNL3-208ENST00000444677 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
GARNL3-208ENST00000444677 EIF2AK4Q9P2K8 1649 aaKnown RBP20.64■□□□□ 0.9
GARNL3-208ENST00000444677 PZPP20742 1482 aa20.64■□□□□ 0.89
GARNL3-208ENST00000444677 ANKRD50Q9ULJ7 1429 aa20.64■□□□□ 0.89
GARNL3-208ENST00000444677 TNRQ92752 1358 aa20.63■□□□□ 0.89
GARNL3-208ENST00000444677 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
GARNL3-208ENST00000444677 FAM135AQ9P2D6 1515 aa20.62■□□□□ 0.89
GARNL3-208ENST00000444677 CEP170BQ9Y4F5 1589 aaPredicted RBP20.61■□□□□ 0.89
GARNL3-208ENST00000444677 CAMSAP1Q5T5Y3 1602 aa20.6■□□□□ 0.89
GARNL3-208ENST00000444677 KANK1Q14678 1352 aa20.59■□□□□ 0.89
GARNL3-208ENST00000444677 CEP152O94986 1710 aa20.58■□□□□ 0.88
GARNL3-208ENST00000444677 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.88
GARNL3-208ENST00000444677 ZC3H13Q5T200 1668 aaKnown RBP20.58■□□□□ 0.88
GARNL3-208ENST00000444677 NCKAP5LQ9HCH0 1330 aa20.57■□□□□ 0.88
GARNL3-208ENST00000444677 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
GARNL3-208ENST00000444677 FBXO41Q8TF61 875 aa20.54■□□□□ 0.88
GARNL3-208ENST00000444677 A2ML1A8K2U0 1454 aa20.54■□□□□ 0.88
GARNL3-208ENST00000444677 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
GARNL3-208ENST00000444677 VWDEQ8N2E2 1590 aa20.53■□□□□ 0.88
GARNL3-208ENST00000444677 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
GARNL3-208ENST00000444677 POLR1AO95602 1720 aaPredicted RBP20.52■□□□□ 0.88
GARNL3-208ENST00000444677 LMTK2Q8IWU2 1503 aa20.51■□□□□ 0.87
GARNL3-208ENST00000444677 PTPRTO14522 1441 aa20.5■□□□□ 0.87
GARNL3-208ENST00000444677 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
GARNL3-208ENST00000444677 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
GARNL3-208ENST00000444677 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
GARNL3-208ENST00000444677 NUP155O75694 1391 aa20.47■□□□□ 0.87
GARNL3-208ENST00000444677 NAIPQ13075 1403 aa20.47■□□□□ 0.87
GARNL3-208ENST00000444677 THEMISQ8N1K5 641 aaPredicted RBP20.47■□□□□ 0.87
GARNL3-208ENST00000444677 PLA2R1Q13018 1463 aa20.47■□□□□ 0.87
GARNL3-208ENST00000444677 NLRP1Q9C000 1473 aa20.47■□□□□ 0.87
GARNL3-208ENST00000444677 CERKQ8TCT0 537 aa20.46■□□□□ 0.87
GARNL3-208ENST00000444677 PKD2Q13563 968 aa20.45■□□□□ 0.86
GARNL3-208ENST00000444677 IDI1Q13907 227 aa20.45■□□□□ 0.86
GARNL3-208ENST00000444677 UGGT1Q9NYU2 1555 aa20.42■□□□□ 0.86
GARNL3-208ENST00000444677 NOS1P29475 1434 aa20.42■□□□□ 0.86
GARNL3-208ENST00000444677 EFCAB6Q5THR3 1501 aa20.42■□□□□ 0.86
GARNL3-208ENST00000444677 LTBP4Q8N2S1 1624 aa20.42■□□□□ 0.86
GARNL3-208ENST00000444677 ANKLE2Q86XL3 938 aa20.41■□□□□ 0.86
GARNL3-208ENST00000444677 UNC13BO14795 1591 aa20.41■□□□□ 0.86
GARNL3-208ENST00000444677 HFM1A2PYH4 1435 aa20.4■□□□□ 0.86
GARNL3-208ENST00000444677 NEURL4Q96JN8 1562 aa20.39■□□□□ 0.85
GARNL3-208ENST00000444677 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
GARNL3-208ENST00000444677 STAG3Q9UJ98 1225 aa20.37■□□□□ 0.85
GARNL3-208ENST00000444677 LTKP29376 864 aa20.36■□□□□ 0.85
GARNL3-208ENST00000444677 SYNMO15061 1565 aa20.36■□□□□ 0.85
GARNL3-208ENST00000444677 ZNF335Q9H4Z2 1342 aaPredicted RBP20.35■□□□□ 0.85
GARNL3-208ENST00000444677 SLC52A1Q9NWF4 448 aa20.35■□□□□ 0.85
GARNL3-208ENST00000444677 UBR1Q8IWV7 1749 aa20.35■□□□□ 0.85
GARNL3-208ENST00000444677 RPRD2Q5VT52 1461 aaKnown RBP20.34■□□□□ 0.85
GARNL3-208ENST00000444677 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.85
GARNL3-208ENST00000444677 TET3O43151 1660 aa20.32■□□□□ 0.84
GARNL3-208ENST00000444677 IQGAP3Q86VI3 1631 aa20.32■□□□□ 0.84
GARNL3-208ENST00000444677 CHGAP10645 457 aaKnown RBP20.31■□□□□ 0.84
GARNL3-208ENST00000444677 IQGAP1P46940 1657 aa20.31■□□□□ 0.84
GARNL3-208ENST00000444677 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
GARNL3-208ENST00000444677 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
GARNL3-208ENST00000444677 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
GARNL3-208ENST00000444677 IQSEC2Q5JU85 1478 aa20.29■□□□□ 0.84
GARNL3-208ENST00000444677 ARHGAP23Q9P227 1491 aa20.29■□□□□ 0.84
GARNL3-208ENST00000444677 E9PCH4 1651 aa20.27■□□□□ 0.84
GARNL3-208ENST00000444677 GCC2Q8IWJ2 1684 aa20.27■□□□□ 0.84
GARNL3-208ENST00000444677 MED14O60244 1454 aa20.27■□□□□ 0.84
GARNL3-208ENST00000444677 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
GARNL3-208ENST00000444677 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
GARNL3-208ENST00000444677 EID1Q9Y6B2 187 aa20.27■□□□□ 0.84
GARNL3-208ENST00000444677 SLIT1O75093 1534 aa20.26■□□□□ 0.83
GARNL3-208ENST00000444677 FOXD1Q16676 465 aa20.25■□□□□ 0.83
GARNL3-208ENST00000444677 SCAF11Q99590 1463 aaKnown RBP20.24■□□□□ 0.83
GARNL3-208ENST00000444677 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
GARNL3-208ENST00000444677 SETD5Q9C0A6 1442 aa20.23■□□□□ 0.83
GARNL3-208ENST00000444677 ADGRB3O60242 1522 aa20.22■□□□□ 0.83
GARNL3-208ENST00000444677 KDM5AP29375 1690 aaKnown RBP20.2■□□□□ 0.82
GARNL3-208ENST00000444677 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
GARNL3-208ENST00000444677 STRCP1A6NGW2 1772 aa20.2■□□□□ 0.82
GARNL3-208ENST00000444677 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
GARNL3-208ENST00000444677 MYO5BQ9ULV0 1848 aa20.19■□□□□ 0.82
GARNL3-208ENST00000444677 SLC26A8Q96RN1 970 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms