RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 CEBPAP49715 358 aaPredicted RBP26.1■■□□□ 1.77
AP1S3-207ENST00000444408 ROCK1Q13464 1354 aa26.07■■□□□ 1.76
AP1S3-207ENST00000444408 ERBINQ96RT1 1412 aa26.07■■□□□ 1.76
AP1S3-207ENST00000444408 EIF2AK4Q9P2K8 1649 aaKnown RBP26.06■■□□□ 1.76
AP1S3-207ENST00000444408 ESF1Q9H501 851 aaKnown RBP26.05■■□□□ 1.76
AP1S3-207ENST00000444408 MROH1Q8NDA8 1641 aa26.04■■□□□ 1.76
AP1S3-207ENST00000444408 HSPA2P54652 639 aa26.04■■□□□ 1.76
AP1S3-207ENST00000444408 RNF17Q9BXT8 1623 aaKnown RBP26.03■■□□□ 1.76
AP1S3-207ENST00000444408 CLTCQ00610 1675 aaKnown RBP26.03■■□□□ 1.76
AP1S3-207ENST00000444408 ANKRD50Q9ULJ7 1429 aa26.03■■□□□ 1.76
AP1S3-207ENST00000444408 CNTLNQ9NXG0 1405 aa26■■□□□ 1.75
AP1S3-207ENST00000444408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26■■□□□ 1.75
AP1S3-207ENST00000444408 ZMYM3Q14202 1370 aa25.98■■□□□ 1.75
AP1S3-207ENST00000444408 WASHC2CQ9Y4E1 1318 aa25.98■■□□□ 1.75
AP1S3-207ENST00000444408 PPP6R1Q9UPN7 881 aa25.98■■□□□ 1.75
AP1S3-207ENST00000444408 C3P01024 1663 aa25.98■■□□□ 1.75
AP1S3-207ENST00000444408 KDM5DQ9BY66 1539 aa25.97■■□□□ 1.75
AP1S3-207ENST00000444408 ABCC3O15438 1527 aa25.94■■□□□ 1.74
AP1S3-207ENST00000444408 PRDM15P57071 1507 aaPredicted RBP25.94■■□□□ 1.74
AP1S3-207ENST00000444408 DEPDC5O75140 1603 aa25.94■■□□□ 1.74
AP1S3-207ENST00000444408 NAIPQ13075 1403 aa25.94■■□□□ 1.74
AP1S3-207ENST00000444408 MROH2AA6NES4 1674 aa25.93■■□□□ 1.74
AP1S3-207ENST00000444408 CERKQ8TCT0 537 aa25.91■■□□□ 1.74
AP1S3-207ENST00000444408 CEP152O94986 1710 aa25.9■■□□□ 1.74
AP1S3-207ENST00000444408 FBXO31Q5XUX0 539 aaPredicted RBP25.89■■□□□ 1.74
AP1S3-207ENST00000444408 FAM135AQ9P2D6 1515 aa25.88■■□□□ 1.73
AP1S3-207ENST00000444408 HFM1A2PYH4 1435 aa25.88■■□□□ 1.73
AP1S3-207ENST00000444408 PREX1Q8TCU6 1659 aa25.87■■□□□ 1.73
AP1S3-207ENST00000444408 VWDEQ8N2E2 1590 aa25.86■■□□□ 1.73
AP1S3-207ENST00000444408 GCC2Q8IWJ2 1684 aa25.86■■□□□ 1.73
AP1S3-207ENST00000444408 KANK1Q14678 1352 aa25.85■■□□□ 1.73
AP1S3-207ENST00000444408 UNC13BO14795 1591 aa25.85■■□□□ 1.73
AP1S3-207ENST00000444408 ZC3H13Q5T200 1668 aaKnown RBP25.84■■□□□ 1.73
AP1S3-207ENST00000444408 CAMSAP1Q5T5Y3 1602 aa25.83■■□□□ 1.73
AP1S3-207ENST00000444408 PZPP20742 1482 aa25.83■■□□□ 1.73
AP1S3-207ENST00000444408 NPATQ14207 1427 aa25.8■■□□□ 1.72
AP1S3-207ENST00000444408 LMTK2Q8IWU2 1503 aa25.8■■□□□ 1.72
AP1S3-207ENST00000444408 DMRT2Q9Y5R5 561 aa25.8■■□□□ 1.72
AP1S3-207ENST00000444408 NUP155O75694 1391 aa25.8■■□□□ 1.72
AP1S3-207ENST00000444408 SETD1BQ9UPS6 1966 aaKnown RBP25.79■■□□□ 1.72
AP1S3-207ENST00000444408 UHRF1BP1Q6BDS2 1440 aa25.75■■□□□ 1.71
AP1S3-207ENST00000444408 ERVK-7P63135 1459 aa25.74■■□□□ 1.71
AP1S3-207ENST00000444408 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
AP1S3-207ENST00000444408 TNRQ92752 1358 aa25.74■■□□□ 1.71
AP1S3-207ENST00000444408 IQGAP3Q86VI3 1631 aa25.74■■□□□ 1.71
AP1S3-207ENST00000444408 EFCAB6Q5THR3 1501 aa25.73■■□□□ 1.71
AP1S3-207ENST00000444408 STRCQ7RTU9 1775 aa25.72■■□□□ 1.71
AP1S3-207ENST00000444408 TRIM52Q96A61 297 aa25.71■■□□□ 1.71
AP1S3-207ENST00000444408 SETD5Q9C0A6 1442 aa25.71■■□□□ 1.71
AP1S3-207ENST00000444408 CFAP65Q6ZU64 1925 aaKnown RBP25.71■■□□□ 1.71
AP1S3-207ENST00000444408 MYO3AQ8NEV4 1616 aa25.7■■□□□ 1.71
AP1S3-207ENST00000444408 SPATA31D1Q6ZQQ2 1576 aa25.7■■□□□ 1.71
AP1S3-207ENST00000444408 TET3O43151 1660 aa25.7■■□□□ 1.7
AP1S3-207ENST00000444408 RAB3GAP2Q9H2M9 1393 aa25.66■■□□□ 1.7
AP1S3-207ENST00000444408 E9PCH4 1651 aa25.64■■□□□ 1.7
AP1S3-207ENST00000444408 CEP170BQ9Y4F5 1589 aaPredicted RBP25.64■■□□□ 1.69
AP1S3-207ENST00000444408 PTPRTO14522 1441 aa25.63■■□□□ 1.69
AP1S3-207ENST00000444408 NOS1P29475 1434 aa25.63■■□□□ 1.69
AP1S3-207ENST00000444408 SYNMO15061 1565 aa25.62■■□□□ 1.69
AP1S3-207ENST00000444408 A2ML1A8K2U0 1454 aa25.61■■□□□ 1.69
AP1S3-207ENST00000444408 RPRD2Q5VT52 1461 aaKnown RBP25.6■■□□□ 1.69
AP1S3-207ENST00000444408 ZNF142P52746 1687 aaPredicted RBP25.6■■□□□ 1.69
AP1S3-207ENST00000444408 NLRP1Q9C000 1473 aa25.59■■□□□ 1.69
AP1S3-207ENST00000444408 SLC4A1APQ9BWU0 796 aaKnown RBP25.58■■□□□ 1.69
AP1S3-207ENST00000444408 PKD2Q13563 968 aa25.57■■□□□ 1.68
AP1S3-207ENST00000444408 IDI1Q13907 227 aa25.56■■□□□ 1.68
AP1S3-207ENST00000444408 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
AP1S3-207ENST00000444408 FOXD1Q16676 465 aa25.55■■□□□ 1.68
AP1S3-207ENST00000444408 UGGT1Q9NYU2 1555 aa25.55■■□□□ 1.68
AP1S3-207ENST00000444408 MPHOSPH9Q99550 1183 aa25.53■■□□□ 1.68
AP1S3-207ENST00000444408 DISP3Q9P2K9 1392 aa25.53■■□□□ 1.68
AP1S3-207ENST00000444408 PIK3C2BO00750 1634 aa25.52■■□□□ 1.68
AP1S3-207ENST00000444408 PLA2R1Q13018 1463 aa25.49■■□□□ 1.67
AP1S3-207ENST00000444408 NCKAP5LQ9HCH0 1330 aa25.49■■□□□ 1.67
AP1S3-207ENST00000444408 IQSEC2Q5JU85 1478 aa25.48■■□□□ 1.67
AP1S3-207ENST00000444408 LTBP4Q8N2S1 1624 aa25.48■■□□□ 1.67
AP1S3-207ENST00000444408 UBR1Q8IWV7 1749 aa25.47■■□□□ 1.67
AP1S3-207ENST00000444408 THEMISQ8N1K5 641 aaPredicted RBP25.47■■□□□ 1.67
AP1S3-207ENST00000444408 SLC52A1Q9NWF4 448 aa25.47■■□□□ 1.67
AP1S3-207ENST00000444408 SPHKAPQ2M3C7 1700 aa25.46■■□□□ 1.67
AP1S3-207ENST00000444408 HRCP23327 699 aa25.44■■□□□ 1.66
AP1S3-207ENST00000444408 STAG3Q9UJ98 1225 aa25.44■■□□□ 1.66
AP1S3-207ENST00000444408 CHGAP10645 457 aaKnown RBP25.42■■□□□ 1.66
AP1S3-207ENST00000444408 ILDR2Q71H61 639 aa25.42■■□□□ 1.66
AP1S3-207ENST00000444408 ADGRB3O60242 1522 aa25.42■■□□□ 1.66
AP1S3-207ENST00000444408 TRPM2O94759 1503 aa25.41■■□□□ 1.66
AP1S3-207ENST00000444408 SOCS7O14512 581 aa25.4■■□□□ 1.66
AP1S3-207ENST00000444408 CLTCL1P53675 1640 aa25.4■■□□□ 1.66
AP1S3-207ENST00000444408 ACIN1Q9UKV3 1341 aaKnown RBP25.39■■□□□ 1.66
AP1S3-207ENST00000444408 TMEM131LA2VDJ0 1609 aa25.38■■□□□ 1.65
AP1S3-207ENST00000444408 ARHGAP23Q9P227 1491 aa25.37■■□□□ 1.65
AP1S3-207ENST00000444408 LTKP29376 864 aa25.37■■□□□ 1.65
AP1S3-207ENST00000444408 NEURL4Q96JN8 1562 aa25.36■■□□□ 1.65
AP1S3-207ENST00000444408 TMEM2Q9UHN6 1383 aa25.36■■□□□ 1.65
AP1S3-207ENST00000444408 ANKLE2Q86XL3 938 aa25.36■■□□□ 1.65
AP1S3-207ENST00000444408 MYO5BQ9ULV0 1848 aa25.35■■□□□ 1.65
AP1S3-207ENST00000444408 SLIT1O75093 1534 aa25.35■■□□□ 1.65
AP1S3-207ENST00000444408 KDM5AP29375 1690 aaKnown RBP25.34■■□□□ 1.65
AP1S3-207ENST00000444408 TXNDC2Q86VQ3 553 aa25.33■■□□□ 1.65
AP1S3-207ENST00000444408 SENP3Q9H4L4 574 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms