RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 NAIPQ13075 1403 aa26.88■■□□□ 1.89
CIRBP-203ENST00000444172 GCC2Q8IWJ2 1684 aa26.86■■□□□ 1.89
CIRBP-203ENST00000444172 HFM1A2PYH4 1435 aa26.86■■□□□ 1.89
CIRBP-203ENST00000444172 RIMS1Q86UR5 1692 aaKnown RBP26.85■■□□□ 1.89
CIRBP-203ENST00000444172 PLPPR3Q6T4P5 718 aa26.85■■□□□ 1.89
CIRBP-203ENST00000444172 PPP6R1Q9UPN7 881 aa26.85■■□□□ 1.89
CIRBP-203ENST00000444172 RNF17Q9BXT8 1623 aaKnown RBP26.85■■□□□ 1.89
CIRBP-203ENST00000444172 WASHC2CQ9Y4E1 1318 aa26.84■■□□□ 1.89
CIRBP-203ENST00000444172 CLTCQ00610 1675 aaKnown RBP26.81■■□□□ 1.88
CIRBP-203ENST00000444172 KANK1Q14678 1352 aa26.8■■□□□ 1.88
CIRBP-203ENST00000444172 MROH1Q8NDA8 1641 aa26.79■■□□□ 1.88
CIRBP-203ENST00000444172 DEPDC5O75140 1603 aa26.78■■□□□ 1.88
CIRBP-203ENST00000444172 CNTLNQ9NXG0 1405 aa26.77■■□□□ 1.88
CIRBP-203ENST00000444172 SETD5Q9C0A6 1442 aa26.76■■□□□ 1.87
CIRBP-203ENST00000444172 PRDM15P57071 1507 aaPredicted RBP26.75■■□□□ 1.87
CIRBP-203ENST00000444172 KDM5DQ9BY66 1539 aa26.75■■□□□ 1.87
CIRBP-203ENST00000444172 PTPRMP28827 1452 aa26.75■■□□□ 1.87
CIRBP-203ENST00000444172 CEBPAP49715 358 aaPredicted RBP26.75■■□□□ 1.87
CIRBP-203ENST00000444172 TRIM52Q96A61 297 aa26.75■■□□□ 1.87
CIRBP-203ENST00000444172 CEP152O94986 1710 aa26.74■■□□□ 1.87
CIRBP-203ENST00000444172 ZMYM3Q14202 1370 aa26.73■■□□□ 1.87
CIRBP-203ENST00000444172 NUP155O75694 1391 aa26.72■■□□□ 1.87
CIRBP-203ENST00000444172 UNC13BO14795 1591 aa26.72■■□□□ 1.87
CIRBP-203ENST00000444172 ABCC3O15438 1527 aa26.71■■□□□ 1.87
CIRBP-203ENST00000444172 ZC3H13Q5T200 1668 aaKnown RBP26.71■■□□□ 1.87
CIRBP-203ENST00000444172 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
CIRBP-203ENST00000444172 FAM135AQ9P2D6 1515 aa26.7■■□□□ 1.87
CIRBP-203ENST00000444172 MROH2AA6NES4 1674 aa26.7■■□□□ 1.87
CIRBP-203ENST00000444172 C3P01024 1663 aa26.69■■□□□ 1.86
CIRBP-203ENST00000444172 RAB3GAP2Q9H2M9 1393 aa26.68■■□□□ 1.86
CIRBP-203ENST00000444172 VWDEQ8N2E2 1590 aa26.67■■□□□ 1.86
CIRBP-203ENST00000444172 CFAP65Q6ZU64 1925 aaKnown RBP26.65■■□□□ 1.86
CIRBP-203ENST00000444172 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
CIRBP-203ENST00000444172 IQGAP3Q86VI3 1631 aa26.63■■□□□ 1.85
CIRBP-203ENST00000444172 LMTK2Q8IWU2 1503 aa26.62■■□□□ 1.85
CIRBP-203ENST00000444172 FBXO31Q5XUX0 539 aaPredicted RBP26.61■■□□□ 1.85
CIRBP-203ENST00000444172 PCGF6Q9BYE7 350 aa26.6■■□□□ 1.85
CIRBP-203ENST00000444172 TET3O43151 1660 aa26.59■■□□□ 1.85
CIRBP-203ENST00000444172 ACIN1Q9UKV3 1341 aaKnown RBP26.59■■□□□ 1.85
CIRBP-203ENST00000444172 PZPP20742 1482 aa26.58■■□□□ 1.85
CIRBP-203ENST00000444172 SLC4A1APQ9BWU0 796 aaKnown RBP26.57■■□□□ 1.84
CIRBP-203ENST00000444172 HRCP23327 699 aa26.56■■□□□ 1.84
CIRBP-203ENST00000444172 EFCAB6Q5THR3 1501 aa26.55■■□□□ 1.84
CIRBP-203ENST00000444172 NPATQ14207 1427 aa26.55■■□□□ 1.84
CIRBP-203ENST00000444172 ARHGAP31Q2M1Z3 1444 aa26.55■■□□□ 1.84
CIRBP-203ENST00000444172 E9PCH4 1651 aa26.52■■□□□ 1.84
CIRBP-203ENST00000444172 MPHOSPH9Q99550 1183 aa26.52■■□□□ 1.84
CIRBP-203ENST00000444172 SETD1BQ9UPS6 1966 aaKnown RBP26.52■■□□□ 1.84
CIRBP-203ENST00000444172 PKD2Q13563 968 aa26.5■■□□□ 1.83
CIRBP-203ENST00000444172 PREX1Q8TCU6 1659 aa26.5■■□□□ 1.83
CIRBP-203ENST00000444172 TNRQ92752 1358 aa26.49■■□□□ 1.83
CIRBP-203ENST00000444172 ERVK-7P63135 1459 aa26.49■■□□□ 1.83
CIRBP-203ENST00000444172 RPRD2Q5VT52 1461 aaKnown RBP26.47■■□□□ 1.83
CIRBP-203ENST00000444172 SPATA31D1Q6ZQQ2 1576 aa26.46■■□□□ 1.83
CIRBP-203ENST00000444172 FOXD1Q16676 465 aa26.45■■□□□ 1.82
CIRBP-203ENST00000444172 UHRF1BP1Q6BDS2 1440 aa26.42■■□□□ 1.82
CIRBP-203ENST00000444172 NOS1P29475 1434 aa26.4■■□□□ 1.82
CIRBP-203ENST00000444172 MYO3AQ8NEV4 1616 aa26.4■■□□□ 1.82
CIRBP-203ENST00000444172 SYNMO15061 1565 aa26.37■■□□□ 1.81
CIRBP-203ENST00000444172 SPHKAPQ2M3C7 1700 aa26.37■■□□□ 1.81
CIRBP-203ENST00000444172 IDI1Q13907 227 aa26.36■■□□□ 1.81
CIRBP-203ENST00000444172 SLC52A1Q9NWF4 448 aa26.35■■□□□ 1.81
CIRBP-203ENST00000444172 NLRP1Q9C000 1473 aa26.35■■□□□ 1.81
CIRBP-203ENST00000444172 STAG3Q9UJ98 1225 aa26.34■■□□□ 1.81
CIRBP-203ENST00000444172 LMTK3Q96Q04 1460 aa26.33■■□□□ 1.81
CIRBP-203ENST00000444172 CEP170BQ9Y4F5 1589 aaPredicted RBP26.33■■□□□ 1.8
CIRBP-203ENST00000444172 PTPRTO14522 1441 aa26.32■■□□□ 1.8
CIRBP-203ENST00000444172 A2ML1A8K2U0 1454 aa26.32■■□□□ 1.8
CIRBP-203ENST00000444172 HSPA2P54652 639 aa26.32■■□□□ 1.8
CIRBP-203ENST00000444172 CHGAP10645 457 aaKnown RBP26.31■■□□□ 1.8
CIRBP-203ENST00000444172 UGGT1Q9NYU2 1555 aa26.31■■□□□ 1.8
CIRBP-203ENST00000444172 ZNF142P52746 1687 aaPredicted RBP26.3■■□□□ 1.8
CIRBP-203ENST00000444172 PIK3C2BO00750 1634 aa26.28■■□□□ 1.8
CIRBP-203ENST00000444172 PLA2R1Q13018 1463 aa26.28■■□□□ 1.8
CIRBP-203ENST00000444172 TRPM2O94759 1503 aa26.27■■□□□ 1.8
CIRBP-203ENST00000444172 THEMISQ8N1K5 641 aaPredicted RBP26.26■■□□□ 1.79
CIRBP-203ENST00000444172 UBR1Q8IWV7 1749 aa26.24■■□□□ 1.79
CIRBP-203ENST00000444172 CLTCL1P53675 1640 aa26.24■■□□□ 1.79
CIRBP-203ENST00000444172 DHX57Q6P158 1386 aaKnown RBP26.22■■□□□ 1.79
CIRBP-203ENST00000444172 CCDC144AA2RUR9 1427 aa26.22■■□□□ 1.79
CIRBP-203ENST00000444172 MYO5BQ9ULV0 1848 aa26.21■■□□□ 1.79
CIRBP-203ENST00000444172 ANKRD30BQ9BXX2 1392 aa26.2■■□□□ 1.79
CIRBP-203ENST00000444172 KIF1BO60333 1816 aa26.2■■□□□ 1.78
CIRBP-203ENST00000444172 ADGRB3O60242 1522 aa26.19■■□□□ 1.78
CIRBP-203ENST00000444172 TMEM131LA2VDJ0 1609 aa26.17■■□□□ 1.78
CIRBP-203ENST00000444172 ZNF326Q5BKZ1 582 aaKnown RBP26.17■■□□□ 1.78
CIRBP-203ENST00000444172 KDM5AP29375 1690 aaKnown RBP26.17■■□□□ 1.78
CIRBP-203ENST00000444172 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
CIRBP-203ENST00000444172 ANKLE2Q86XL3 938 aa26.13■■□□□ 1.77
CIRBP-203ENST00000444172 RGL3Q3MIN7 710 aa26.11■■□□□ 1.77
CIRBP-203ENST00000444172 TXNDC2Q86VQ3 553 aa26.11■■□□□ 1.77
CIRBP-203ENST00000444172 EID1Q9Y6B2 187 aa26.11■■□□□ 1.77
CIRBP-203ENST00000444172 TMEM2Q9UHN6 1383 aa26.1■■□□□ 1.77
CIRBP-203ENST00000444172 HDGFP51858 240 aaKnown RBP26.09■■□□□ 1.77
CIRBP-203ENST00000444172 STRCQ7RTU9 1775 aa26.09■■□□□ 1.77
CIRBP-203ENST00000444172 NUTM2DQ5VT03 806 aaPredicted RBP26.08■■□□□ 1.77
CIRBP-203ENST00000444172 SLIT1O75093 1534 aa26.08■■□□□ 1.77
CIRBP-203ENST00000444172 LTKP29376 864 aa26.07■■□□□ 1.76
CIRBP-203ENST00000444172 RIMS2Q9UQ26 1411 aa26.06■■□□□ 1.76
CIRBP-203ENST00000444172 ARHGAP23Q9P227 1491 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms