RNA–Protein interactions for RNA: ENST00000444100.2

PEX13-204, Transcript of peroxisomal biogenesis factor 13, humanhuman

TSL 1 (best) BASIC

Gene PEX13, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX13-204ENST00000444100 TRIM52Q96A61 297 aa26.08■■□□□ 1.77
PEX13-204ENST00000444100 PPP6R1Q9UPN7 881 aa26.08■■□□□ 1.77
PEX13-204ENST00000444100 SETD5Q9C0A6 1442 aa26.05■■□□□ 1.76
PEX13-204ENST00000444100 EIF2AK4Q9P2K8 1649 aaKnown RBP26.05■■□□□ 1.76
PEX13-204ENST00000444100 KANK1Q14678 1352 aa26.05■■□□□ 1.76
PEX13-204ENST00000444100 CEBPAP49715 358 aaPredicted RBP26.04■■□□□ 1.76
PEX13-204ENST00000444100 ADAMTSL3P82987 1691 aa26.03■■□□□ 1.76
PEX13-204ENST00000444100 PCGF6Q9BYE7 350 aa26.03■■□□□ 1.76
PEX13-204ENST00000444100 MADDQ8WXG6 1647 aa26.02■■□□□ 1.76
PEX13-204ENST00000444100 NUP155O75694 1391 aa26.02■■□□□ 1.76
PEX13-204ENST00000444100 GCC2Q8IWJ2 1684 aa25.99■■□□□ 1.75
PEX13-204ENST00000444100 RNF17Q9BXT8 1623 aaKnown RBP25.99■■□□□ 1.75
PEX13-204ENST00000444100 RAB3GAP2Q9H2M9 1393 aa25.99■■□□□ 1.75
PEX13-204ENST00000444100 ZMYM3Q14202 1370 aa25.98■■□□□ 1.75
PEX13-204ENST00000444100 CNTLNQ9NXG0 1405 aa25.97■■□□□ 1.75
PEX13-204ENST00000444100 FER1L4A9Z1Z3 1794 aa25.97■■□□□ 1.75
PEX13-204ENST00000444100 RIMS1Q86UR5 1692 aaKnown RBP25.97■■□□□ 1.75
PEX13-204ENST00000444100 MROH1Q8NDA8 1641 aa25.96■■□□□ 1.75
PEX13-204ENST00000444100 PTPRMP28827 1452 aa25.95■■□□□ 1.74
PEX13-204ENST00000444100 KDM5DQ9BY66 1539 aa25.94■■□□□ 1.74
PEX13-204ENST00000444100 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
PEX13-204ENST00000444100 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
PEX13-204ENST00000444100 ABCC3O15438 1527 aa25.93■■□□□ 1.74
PEX13-204ENST00000444100 PRDM15P57071 1507 aaPredicted RBP25.93■■□□□ 1.74
PEX13-204ENST00000444100 DEPDC5O75140 1603 aa25.92■■□□□ 1.74
PEX13-204ENST00000444100 FBXO31Q5XUX0 539 aaPredicted RBP25.91■■□□□ 1.74
PEX13-204ENST00000444100 SLC4A1APQ9BWU0 796 aaKnown RBP25.89■■□□□ 1.74
PEX13-204ENST00000444100 UNC13BO14795 1591 aa25.89■■□□□ 1.73
PEX13-204ENST00000444100 CEP152O94986 1710 aa25.86■■□□□ 1.73
PEX13-204ENST00000444100 HRCP23327 699 aa25.86■■□□□ 1.73
PEX13-204ENST00000444100 VWDEQ8N2E2 1590 aa25.85■■□□□ 1.73
PEX13-204ENST00000444100 MPHOSPH9Q99550 1183 aa25.84■■□□□ 1.73
PEX13-204ENST00000444100 FAM135AQ9P2D6 1515 aa25.84■■□□□ 1.73
PEX13-204ENST00000444100 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
PEX13-204ENST00000444100 PKD2Q13563 968 aa25.83■■□□□ 1.72
PEX13-204ENST00000444100 LMTK2Q8IWU2 1503 aa25.81■■□□□ 1.72
PEX13-204ENST00000444100 C3P01024 1663 aa25.81■■□□□ 1.72
PEX13-204ENST00000444100 ZC3H13Q5T200 1668 aaKnown RBP25.81■■□□□ 1.72
PEX13-204ENST00000444100 FOXD1Q16676 465 aa25.8■■□□□ 1.72
PEX13-204ENST00000444100 NPATQ14207 1427 aa25.8■■□□□ 1.72
PEX13-204ENST00000444100 MROH2AA6NES4 1674 aa25.79■■□□□ 1.72
PEX13-204ENST00000444100 IQGAP3Q86VI3 1631 aa25.79■■□□□ 1.72
PEX13-204ENST00000444100 PZPP20742 1482 aa25.79■■□□□ 1.72
PEX13-204ENST00000444100 CAMSAP1Q5T5Y3 1602 aa25.79■■□□□ 1.72
PEX13-204ENST00000444100 ARHGAP31Q2M1Z3 1444 aa25.77■■□□□ 1.72
PEX13-204ENST00000444100 CFAP65Q6ZU64 1925 aaKnown RBP25.76■■□□□ 1.71
PEX13-204ENST00000444100 EFCAB6Q5THR3 1501 aa25.75■■□□□ 1.71
PEX13-204ENST00000444100 TNRQ92752 1358 aa25.75■■□□□ 1.71
PEX13-204ENST00000444100 TET3O43151 1660 aa25.74■■□□□ 1.71
PEX13-204ENST00000444100 ERVK-7P63135 1459 aa25.71■■□□□ 1.71
PEX13-204ENST00000444100 RPRD2Q5VT52 1461 aaKnown RBP25.68■■□□□ 1.7
PEX13-204ENST00000444100 E9PCH4 1651 aa25.67■■□□□ 1.7
PEX13-204ENST00000444100 IDI1Q13907 227 aa25.66■■□□□ 1.7
PEX13-204ENST00000444100 NOS1P29475 1434 aa25.64■■□□□ 1.7
PEX13-204ENST00000444100 SPATA31D1Q6ZQQ2 1576 aa25.64■■□□□ 1.69
PEX13-204ENST00000444100 UHRF1BP1Q6BDS2 1440 aa25.64■■□□□ 1.69
PEX13-204ENST00000444100 PREX1Q8TCU6 1659 aa25.63■■□□□ 1.69
PEX13-204ENST00000444100 CHGAP10645 457 aaKnown RBP25.63■■□□□ 1.69
PEX13-204ENST00000444100 STAG3Q9UJ98 1225 aa25.63■■□□□ 1.69
PEX13-204ENST00000444100 SLC52A1Q9NWF4 448 aa25.63■■□□□ 1.69
PEX13-204ENST00000444100 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
PEX13-204ENST00000444100 HSPA2P54652 639 aa25.61■■□□□ 1.69
PEX13-204ENST00000444100 PTPRTO14522 1441 aa25.58■■□□□ 1.69
PEX13-204ENST00000444100 SYNMO15061 1565 aa25.58■■□□□ 1.68
PEX13-204ENST00000444100 PLA2R1Q13018 1463 aa25.58■■□□□ 1.68
PEX13-204ENST00000444100 NLRP1Q9C000 1473 aa25.56■■□□□ 1.68
PEX13-204ENST00000444100 UGGT1Q9NYU2 1555 aa25.56■■□□□ 1.68
PEX13-204ENST00000444100 DHX57Q6P158 1386 aaKnown RBP25.54■■□□□ 1.68
PEX13-204ENST00000444100 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
PEX13-204ENST00000444100 A2ML1A8K2U0 1454 aa25.53■■□□□ 1.68
PEX13-204ENST00000444100 MYO3AQ8NEV4 1616 aa25.53■■□□□ 1.68
PEX13-204ENST00000444100 LMTK3Q96Q04 1460 aa25.53■■□□□ 1.68
PEX13-204ENST00000444100 ANKRD30BQ9BXX2 1392 aa25.51■■□□□ 1.67
PEX13-204ENST00000444100 SPHKAPQ2M3C7 1700 aa25.51■■□□□ 1.67
PEX13-204ENST00000444100 CEP170BQ9Y4F5 1589 aaPredicted RBP25.5■■□□□ 1.67
PEX13-204ENST00000444100 CCDC144AA2RUR9 1427 aa25.49■■□□□ 1.67
PEX13-204ENST00000444100 TRPM2O94759 1503 aa25.49■■□□□ 1.67
PEX13-204ENST00000444100 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
PEX13-204ENST00000444100 RGL3Q3MIN7 710 aa25.47■■□□□ 1.67
PEX13-204ENST00000444100 PIK3C2BO00750 1634 aa25.46■■□□□ 1.67
PEX13-204ENST00000444100 CLTCL1P53675 1640 aa25.44■■□□□ 1.66
PEX13-204ENST00000444100 NEUROD1Q13562 356 aa25.43■■□□□ 1.66
PEX13-204ENST00000444100 SIN3AQ96ST3 1273 aa25.43■■□□□ 1.66
PEX13-204ENST00000444100 NCKAP5LQ9HCH0 1330 aa25.43■■□□□ 1.66
PEX13-204ENST00000444100 NUTM2DQ5VT03 806 aaPredicted RBP25.42■■□□□ 1.66
PEX13-204ENST00000444100 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
PEX13-204ENST00000444100 TXNDC2Q86VQ3 553 aa25.41■■□□□ 1.66
PEX13-204ENST00000444100 ANKLE2Q86XL3 938 aa25.41■■□□□ 1.66
PEX13-204ENST00000444100 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
PEX13-204ENST00000444100 EID1Q9Y6B2 187 aa25.4■■□□□ 1.66
PEX13-204ENST00000444100 ZNF142P52746 1687 aaPredicted RBP25.4■■□□□ 1.66
PEX13-204ENST00000444100 ADGRB3O60242 1522 aa25.39■■□□□ 1.65
PEX13-204ENST00000444100 TMEM2Q9UHN6 1383 aa25.38■■□□□ 1.65
PEX13-204ENST00000444100 LTKP29376 864 aa25.37■■□□□ 1.65
PEX13-204ENST00000444100 UBR1Q8IWV7 1749 aa25.37■■□□□ 1.65
PEX13-204ENST00000444100 PPP1R15AO75807 674 aaPredicted RBP25.37■■□□□ 1.65
PEX13-204ENST00000444100 TMEM131LA2VDJ0 1609 aa25.36■■□□□ 1.65
PEX13-204ENST00000444100 HDGFP51858 240 aaKnown RBP25.36■■□□□ 1.65
PEX13-204ENST00000444100 BCANQ96GW7 911 aa25.35■■□□□ 1.65
PEX13-204ENST00000444100 RIMS2Q9UQ26 1411 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms