RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 CNTLNQ9NXG0 1405 aa27.66■■■□□ 2.02
LRCH1-204ENST00000443945 ZMYM3Q14202 1370 aa27.65■■■□□ 2.02
LRCH1-204ENST00000443945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.65■■■□□ 2.021e-9■■■■■ 51.3
LRCH1-204ENST00000443945 EIF2AK4Q9P2K8 1649 aaKnown RBP27.64■■■□□ 2.02
LRCH1-204ENST00000443945 ERBINQ96RT1 1412 aa27.63■■■□□ 2.01
LRCH1-204ENST00000443945 WASHC2CQ9Y4E1 1318 aa27.63■■■□□ 2.01
LRCH1-204ENST00000443945 RNF17Q9BXT8 1623 aaKnown RBP27.63■■■□□ 2.01
LRCH1-204ENST00000443945 MROH1Q8NDA8 1641 aa27.62■■■□□ 2.01
LRCH1-204ENST00000443945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.61■■■□□ 2.013e-6■□□□□ 10.9
LRCH1-204ENST00000443945 MROH2AA6NES4 1674 aa27.6■■■□□ 2.01
LRCH1-204ENST00000443945 KDM5DQ9BY66 1539 aa27.6■■■□□ 2.01
LRCH1-204ENST00000443945 PPP6R1Q9UPN7 881 aa27.6■■■□□ 2.01
LRCH1-204ENST00000443945 LMTK3Q96Q04 1460 aa27.58■■■□□ 2.01
LRCH1-204ENST00000443945 ANKRD50Q9ULJ7 1429 aa27.57■■■□□ 2
LRCH1-204ENST00000443945 HSPA2P54652 639 aa27.55■■■□□ 2
LRCH1-204ENST00000443945 ROCK1Q13464 1354 aa27.54■■■□□ 2
LRCH1-204ENST00000443945 ABCC3O15438 1527 aa27.54■■■□□ 2
LRCH1-204ENST00000443945 FBXO31Q5XUX0 539 aaPredicted RBP27.53■■■□□ 2
LRCH1-204ENST00000443945 CEP152O94986 1710 aa27.53■■■□□ 2
LRCH1-204ENST00000443945 PRDM15P57071 1507 aaPredicted RBP27.52■■■□□ 2
LRCH1-204ENST00000443945 DEPDC5O75140 1603 aa27.5■■□□□ 1.99
LRCH1-204ENST00000443945 PREX1Q8TCU6 1659 aa27.5■■□□□ 1.99
LRCH1-204ENST00000443945 FAM135AQ9P2D6 1515 aa27.48■■□□□ 1.99
LRCH1-204ENST00000443945 UHRF1BP1Q6BDS2 1440 aa27.47■■□□□ 1.99
LRCH1-204ENST00000443945 ZC3H13Q5T200 1668 aaKnown RBP27.46■■□□□ 1.99
LRCH1-204ENST00000443945 SETD1BQ9UPS6 1966 aaKnown RBP27.46■■□□□ 1.99
LRCH1-204ENST00000443945 NPATQ14207 1427 aa27.46■■□□□ 1.99
LRCH1-204ENST00000443945 PZPP20742 1482 aa27.45■■□□□ 1.99
LRCH1-204ENST00000443945 CAMSAP1Q5T5Y3 1602 aa27.44■■□□□ 1.98
LRCH1-204ENST00000443945 KANK1Q14678 1352 aa27.43■■□□□ 1.98
LRCH1-204ENST00000443945 CFAP65Q6ZU64 1925 aaKnown RBP27.41■■□□□ 1.98
LRCH1-204ENST00000443945 VWDEQ8N2E2 1590 aa27.4■■□□□ 1.98
LRCH1-204ENST00000443945 MYO3AQ8NEV4 1616 aa27.39■■□□□ 1.98
LRCH1-204ENST00000443945 NAIPQ13075 1403 aa27.38■■□□□ 1.97
LRCH1-204ENST00000443945 TNRQ92752 1358 aa27.38■■□□□ 1.97
LRCH1-204ENST00000443945 UNC13BO14795 1591 aa27.36■■□□□ 1.97
LRCH1-204ENST00000443945 ERVK-7P63135 1459 aa27.33■■□□□ 1.97
LRCH1-204ENST00000443945 LMTK2Q8IWU2 1503 aa27.33■■□□□ 1.97
LRCH1-204ENST00000443945 GCC2Q8IWJ2 1684 aa27.32■■□□□ 1.96
LRCH1-204ENST00000443945 HFM1A2PYH4 1435 aa27.32■■□□□ 1.96
LRCH1-204ENST00000443945 CEP170BQ9Y4F5 1589 aaPredicted RBP27.32■■□□□ 1.96
LRCH1-204ENST00000443945 NUP155O75694 1391 aa27.31■■□□□ 1.96
LRCH1-204ENST00000443945 SPATA31D1Q6ZQQ2 1576 aa27.31■■□□□ 1.96
LRCH1-204ENST00000443945 ARHGAP31Q2M1Z3 1444 aa27.3■■□□□ 1.96
LRCH1-204ENST00000443945 EFCAB6Q5THR3 1501 aa27.3■■□□□ 1.96
LRCH1-204ENST00000443945 ZNF142P52746 1687 aaPredicted RBP27.28■■□□□ 1.96
LRCH1-204ENST00000443945 A2ML1A8K2U0 1454 aa27.26■■□□□ 1.95
LRCH1-204ENST00000443945 IQGAP3Q86VI3 1631 aa27.25■■□□□ 1.95
LRCH1-204ENST00000443945 TET3O43151 1660 aa27.24■■□□□ 1.95
LRCH1-204ENST00000443945 STRCQ7RTU9 1775 aa27.23■■□□□ 1.95
LRCH1-204ENST00000443945 NLRP1Q9C000 1473 aa27.21■■□□□ 1.95
LRCH1-204ENST00000443945 TRIM52Q96A61 297 aa27.2■■□□□ 1.95
LRCH1-204ENST00000443945 E9PCH4 1651 aa27.19■■□□□ 1.94
LRCH1-204ENST00000443945 SYNMO15061 1565 aa27.19■■□□□ 1.94
LRCH1-204ENST00000443945 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
LRCH1-204ENST00000443945 NCKAP5LQ9HCH0 1330 aa27.17■■□□□ 1.94
LRCH1-204ENST00000443945 NOS1P29475 1434 aa27.17■■□□□ 1.94
LRCH1-204ENST00000443945 RPRD2Q5VT52 1461 aaKnown RBP27.15■■□□□ 1.94
LRCH1-204ENST00000443945 IDI1Q13907 227 aa27.14■■□□□ 1.94
LRCH1-204ENST00000443945 PIK3C2BO00750 1634 aa27.12■■□□□ 1.93
LRCH1-204ENST00000443945 THEMISQ8N1K5 641 aaPredicted RBP27.11■■□□□ 1.93
LRCH1-204ENST00000443945 UBR1Q8IWV7 1749 aa27.1■■□□□ 1.93
LRCH1-204ENST00000443945 PLA2R1Q13018 1463 aa27.1■■□□□ 1.93
LRCH1-204ENST00000443945 SETD5Q9C0A6 1442 aa27.1■■□□□ 1.93
LRCH1-204ENST00000443945 STAG3Q9UJ98 1225 aa27.07■■□□□ 1.92
LRCH1-204ENST00000443945 SLC4A1APQ9BWU0 796 aaKnown RBP27.06■■□□□ 1.92
LRCH1-204ENST00000443945 PKD2Q13563 968 aa27.05■■□□□ 1.92
LRCH1-204ENST00000443945 RAB3GAP2Q9H2M9 1393 aa27.05■■□□□ 1.92
LRCH1-204ENST00000443945 SLC52A1Q9NWF4 448 aa27.04■■□□□ 1.92
LRCH1-204ENST00000443945 DMRT2Q9Y5R5 561 aa27.04■■□□□ 1.92
LRCH1-204ENST00000443945 FOXD1Q16676 465 aa27.03■■□□□ 1.92
LRCH1-204ENST00000443945 ANKLE2Q86XL3 938 aa27.02■■□□□ 1.92
LRCH1-204ENST00000443945 NEURL4Q96JN8 1562 aa27.01■■□□□ 1.91
LRCH1-204ENST00000443945 CHGAP10645 457 aaKnown RBP27.01■■□□□ 1.91
LRCH1-204ENST00000443945 POLR1AO95602 1720 aaPredicted RBP27■■□□□ 1.91
LRCH1-204ENST00000443945 SPHKAPQ2M3C7 1700 aa27■■□□□ 1.91
LRCH1-204ENST00000443945 PTPRTO14522 1441 aa26.99■■□□□ 1.91
LRCH1-204ENST00000443945 ADGRB3O60242 1522 aa26.99■■□□□ 1.91
LRCH1-204ENST00000443945 LTKP29376 864 aa26.97■■□□□ 1.91
LRCH1-204ENST00000443945 MYO5BQ9ULV0 1848 aa26.97■■□□□ 1.91
LRCH1-204ENST00000443945 MPHOSPH9Q99550 1183 aa26.96■■□□□ 1.91
LRCH1-204ENST00000443945 TMEM2Q9UHN6 1383 aa26.96■■□□□ 1.91
LRCH1-204ENST00000443945 TXNDC2Q86VQ3 553 aa26.95■■□□□ 1.9
LRCH1-204ENST00000443945 SENP3Q9H4L4 574 aaPredicted RBP26.95■■□□□ 1.9
LRCH1-204ENST00000443945 SLIT1O75093 1534 aa26.95■■□□□ 1.9
LRCH1-204ENST00000443945 ARHGAP23Q9P227 1491 aa26.94■■□□□ 1.9
LRCH1-204ENST00000443945 TMEM131LA2VDJ0 1609 aa26.94■■□□□ 1.9
LRCH1-204ENST00000443945 KDM5AP29375 1690 aaKnown RBP26.93■■□□□ 1.9
LRCH1-204ENST00000443945 SCAF11Q99590 1463 aaKnown RBP26.92■■□□□ 1.9
LRCH1-204ENST00000443945 NPHP4O75161 1426 aaPredicted RBP26.92■■□□□ 1.9
LRCH1-204ENST00000443945 TRPM2O94759 1503 aa26.9■■□□□ 1.9
LRCH1-204ENST00000443945 ZNF335Q9H4Z2 1342 aaPredicted RBP26.9■■□□□ 1.9
LRCH1-204ENST00000443945 CLTCL1P53675 1640 aa26.9■■□□□ 1.9
LRCH1-204ENST00000443945 NUTM2DQ5VT03 806 aaPredicted RBP26.89■■□□□ 1.9
LRCH1-204ENST00000443945 EID1Q9Y6B2 187 aa26.89■■□□□ 1.89
LRCH1-204ENST00000443945 MED14O60244 1454 aa26.89■■□□□ 1.89
LRCH1-204ENST00000443945 IQGAP1P46940 1657 aa26.88■■□□□ 1.89
LRCH1-204ENST00000443945 RIMS2Q9UQ26 1411 aa26.84■■□□□ 1.89
LRCH1-204ENST00000443945 ZFYVE9O95405 1425 aa26.83■■□□□ 1.89
LRCH1-204ENST00000443945 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms