RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 UNC13BO14795 1591 aa13.8□□□□□ -0.2
SMPD4P1-203ENST00000443839 DHX29Q7Z478 1369 aaKnown RBP13.79□□□□□ -0.2
SMPD4P1-203ENST00000443839 PKD2Q13563 968 aa13.78□□□□□ -0.2
SMPD4P1-203ENST00000443839 FAM135AQ9P2D6 1515 aa13.78□□□□□ -0.2
SMPD4P1-203ENST00000443839 A2MP01023 1474 aa13.77□□□□□ -0.21
SMPD4P1-203ENST00000443839 FRMPD1Q5SYB0 1578 aa13.77□□□□□ -0.21
SMPD4P1-203ENST00000443839 ABCA6Q8N139 1617 aa13.77□□□□□ -0.21
SMPD4P1-203ENST00000443839 MAGI2Q86UL8 1455 aa13.76□□□□□ -0.21
SMPD4P1-203ENST00000443839 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
SMPD4P1-203ENST00000443839 KIF3BO15066 747 aa13.76□□□□□ -0.21
SMPD4P1-203ENST00000443839 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
SMPD4P1-203ENST00000443839 ANKRD30BQ9BXX2 1392 aa13.75□□□□□ -0.21
SMPD4P1-203ENST00000443839 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
SMPD4P1-203ENST00000443839 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
SMPD4P1-203ENST00000443839 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
SMPD4P1-203ENST00000443839 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
SMPD4P1-203ENST00000443839 TIMELESSQ9UNS1 1208 aa13.75□□□□□ -0.21
SMPD4P1-203ENST00000443839 ZMYM4Q5VZL5 1548 aa13.74□□□□□ -0.21
SMPD4P1-203ENST00000443839 DEPDC5O75140 1603 aa13.74□□□□□ -0.21
SMPD4P1-203ENST00000443839 DIP2CQ9Y2E4 1556 aa13.73□□□□□ -0.21
SMPD4P1-203ENST00000443839 KANK1Q14678 1352 aa13.73□□□□□ -0.21
SMPD4P1-203ENST00000443839 YEATS2Q9ULM3 1422 aa13.72□□□□□ -0.21
SMPD4P1-203ENST00000443839 PRDM15P57071 1507 aaPredicted RBP13.7□□□□□ -0.22
SMPD4P1-203ENST00000443839 RPRD2Q5VT52 1461 aaKnown RBP13.7□□□□□ -0.22
SMPD4P1-203ENST00000443839 COL17A1Q9UMD9 1497 aaPredicted RBP13.69□□□□□ -0.22
SMPD4P1-203ENST00000443839 MROH1Q8NDA8 1641 aa13.69□□□□□ -0.22
SMPD4P1-203ENST00000443839 RNF17Q9BXT8 1623 aaKnown RBP13.69□□□□□ -0.22
SMPD4P1-203ENST00000443839 GGT6Q6P531 493 aa13.67□□□□□ -0.22
SMPD4P1-203ENST00000443839 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
SMPD4P1-203ENST00000443839 VWDEQ8N2E2 1590 aa13.67□□□□□ -0.22
SMPD4P1-203ENST00000443839 ATP10AO60312 1499 aa13.66□□□□□ -0.22
SMPD4P1-203ENST00000443839 TET3O43151 1660 aa13.66□□□□□ -0.22
SMPD4P1-203ENST00000443839 PPP1R15AO75807 674 aaPredicted RBP13.64□□□□□ -0.23
SMPD4P1-203ENST00000443839 KCNA4P22459 653 aa13.64□□□□□ -0.23
SMPD4P1-203ENST00000443839 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
SMPD4P1-203ENST00000443839 E9PCH4 1651 aa13.64□□□□□ -0.23
SMPD4P1-203ENST00000443839 ARHGEF40Q8TER5 1519 aa13.63□□□□□ -0.23
SMPD4P1-203ENST00000443839 L3MBTL2Q969R5 705 aa13.63□□□□□ -0.23
SMPD4P1-203ENST00000443839 CEP152O94986 1710 aa13.62□□□□□ -0.23
SMPD4P1-203ENST00000443839 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
SMPD4P1-203ENST00000443839 PLA2R1Q13018 1463 aa13.62□□□□□ -0.23
SMPD4P1-203ENST00000443839 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
SMPD4P1-203ENST00000443839 EFCAB6Q5THR3 1501 aa13.61□□□□□ -0.23
SMPD4P1-203ENST00000443839 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
SMPD4P1-203ENST00000443839 ABCC3O15438 1527 aa13.59□□□□□ -0.23
SMPD4P1-203ENST00000443839 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
SMPD4P1-203ENST00000443839 AGLP35573 1532 aa13.59□□□□□ -0.23
SMPD4P1-203ENST00000443839 TRPM2O94759 1503 aa13.58□□□□□ -0.24
SMPD4P1-203ENST00000443839 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
SMPD4P1-203ENST00000443839 ZC3H13Q5T200 1668 aaKnown RBP13.57□□□□□ -0.24
SMPD4P1-203ENST00000443839 PTPRTO14522 1441 aa13.57□□□□□ -0.24
SMPD4P1-203ENST00000443839 CAMSAP1Q5T5Y3 1602 aa13.56□□□□□ -0.24
SMPD4P1-203ENST00000443839 NPATQ14207 1427 aa13.56□□□□□ -0.24
SMPD4P1-203ENST00000443839 SIGLEC1Q9BZZ2 1709 aa13.55□□□□□ -0.24
SMPD4P1-203ENST00000443839 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
SMPD4P1-203ENST00000443839 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
SMPD4P1-203ENST00000443839 MLECQ14165 292 aa13.54□□□□□ -0.24
SMPD4P1-203ENST00000443839 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
SMPD4P1-203ENST00000443839 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
SMPD4P1-203ENST00000443839 ZNF326Q5BKZ1 582 aaKnown RBP13.52□□□□□ -0.24
SMPD4P1-203ENST00000443839 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.24
SMPD4P1-203ENST00000443839 ARHGAP31Q2M1Z3 1444 aa13.51□□□□□ -0.25
SMPD4P1-203ENST00000443839 KDM2AQ9Y2K7 1162 aa13.51□□□□□ -0.25
SMPD4P1-203ENST00000443839 CNTLNQ9NXG0 1405 aa13.5□□□□□ -0.25
SMPD4P1-203ENST00000443839 NBPF8Q3BBV2 869 aa13.5□□□□□ -0.25
SMPD4P1-203ENST00000443839 ESF1Q9H501 851 aaKnown RBP13.5□□□□□ -0.25
SMPD4P1-203ENST00000443839 UGGT1Q9NYU2 1555 aa13.5□□□□□ -0.25
SMPD4P1-203ENST00000443839 SPATA31E1Q6ZUB1 1445 aa13.5□□□□□ -0.25
SMPD4P1-203ENST00000443839 CLTCQ00610 1675 aaKnown RBP13.49□□□□□ -0.25
SMPD4P1-203ENST00000443839 NOS1P29475 1434 aa13.47□□□□□ -0.25
SMPD4P1-203ENST00000443839 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
SMPD4P1-203ENST00000443839 KIF1BO60333 1816 aa13.47□□□□□ -0.25
SMPD4P1-203ENST00000443839 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
SMPD4P1-203ENST00000443839 PREX1Q8TCU6 1659 aa13.45□□□□□ -0.26
SMPD4P1-203ENST00000443839 SYNMO15061 1565 aa13.45□□□□□ -0.26
SMPD4P1-203ENST00000443839 NEURL4Q96JN8 1562 aa13.44□□□□□ -0.26
SMPD4P1-203ENST00000443839 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
SMPD4P1-203ENST00000443839 HIRIP3Q9BW71 556 aaPredicted RBP13.43□□□□□ -0.26
SMPD4P1-203ENST00000443839 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.263e-9■■■■■ 31.5
SMPD4P1-203ENST00000443839 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
SMPD4P1-203ENST00000443839 ERVK-7P63135 1459 aa13.43□□□□□ -0.26
SMPD4P1-203ENST00000443839 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
SMPD4P1-203ENST00000443839 PIK3C2BO00750 1634 aa13.43□□□□□ -0.26
SMPD4P1-203ENST00000443839 ADGRB3O60242 1522 aa13.42□□□□□ -0.26
SMPD4P1-203ENST00000443839 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
SMPD4P1-203ENST00000443839 SLC52A1Q9NWF4 448 aa13.42□□□□□ -0.26
SMPD4P1-203ENST00000443839 MROH2AA6NES4 1674 aa13.42□□□□□ -0.26
SMPD4P1-203ENST00000443839 STAC3Q96MF2 364 aa13.42□□□□□ -0.26
SMPD4P1-203ENST00000443839 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
SMPD4P1-203ENST00000443839 HSPA5P11021 654 aaKnown RBP13.4□□□□□ -0.26
SMPD4P1-203ENST00000443839 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
SMPD4P1-203ENST00000443839 IDI1Q13907 227 aa13.4□□□□□ -0.26
SMPD4P1-203ENST00000443839 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
SMPD4P1-203ENST00000443839 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
SMPD4P1-203ENST00000443839 SPATA31D1Q6ZQQ2 1576 aa13.39□□□□□ -0.27
SMPD4P1-203ENST00000443839 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
SMPD4P1-203ENST00000443839 USP47Q96K76 1375 aa13.38□□□□□ -0.27
SMPD4P1-203ENST00000443839 MYOM2P54296 1465 aa13.37□□□□□ -0.27
SMPD4P1-203ENST00000443839 FER1L4A9Z1Z3 1794 aa13.37□□□□□ -0.27
SMPD4P1-203ENST00000443839 IFT172Q9UG01 1749 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms