RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 EIF2AK4Q9P2K8 1649 aaKnown RBP31.71■■■□□ 2.67
UBE2D4-205ENST00000443780 KDM5DQ9BY66 1539 aa31.7■■■□□ 2.67
UBE2D4-205ENST00000443780 RNF17Q9BXT8 1623 aaKnown RBP31.7■■■□□ 2.66
UBE2D4-205ENST00000443780 DAPK1P53355 1430 aa31.69■■■□□ 2.66
UBE2D4-205ENST00000443780 DUOX2Q9NRD8 1548 aa31.68■■■□□ 2.66
UBE2D4-205ENST00000443780 MYO3AQ8NEV4 1616 aa31.66■■■□□ 2.66
UBE2D4-205ENST00000443780 WASHC2CQ9Y4E1 1318 aa31.66■■■□□ 2.66
UBE2D4-205ENST00000443780 ZNF142P52746 1687 aaPredicted RBP31.63■■■□□ 2.65
UBE2D4-205ENST00000443780 KIF15Q9NS87 1388 aa31.62■■■□□ 2.65
UBE2D4-205ENST00000443780 ILDR1Q86SU0 546 aaPredicted RBP31.61■■■□□ 2.65
UBE2D4-205ENST00000443780 ZC3H13Q5T200 1668 aaKnown RBP31.6■■■□□ 2.65
UBE2D4-205ENST00000443780 PZPP20742 1482 aa31.59■■■□□ 2.65
UBE2D4-205ENST00000443780 RRP7BPQ9NSQ0 103 aa31.59■■■□□ 2.65
UBE2D4-205ENST00000443780 MROH1Q8NDA8 1641 aa31.59■■■□□ 2.65
UBE2D4-205ENST00000443780 DMRT2Q9Y5R5 561 aa31.58■■■□□ 2.65
UBE2D4-205ENST00000443780 CEP170BQ9Y4F5 1589 aaPredicted RBP31.58■■■□□ 2.65
UBE2D4-205ENST00000443780 ABCC3O15438 1527 aa31.56■■■□□ 2.64
UBE2D4-205ENST00000443780 FAM50AQ14320 339 aaKnown RBP31.56■■■□□ 2.64
UBE2D4-205ENST00000443780 FBXO31Q5XUX0 539 aaPredicted RBP31.56■■■□□ 2.64
UBE2D4-205ENST00000443780 CAMSAP1Q5T5Y3 1602 aa31.56■■■□□ 2.64
UBE2D4-205ENST00000443780 CHIC2Q9UKJ5 165 aa31.55■■■□□ 2.64
UBE2D4-205ENST00000443780 ERBINQ96RT1 1412 aa31.55■■■□□ 2.64
UBE2D4-205ENST00000443780 CEP152O94986 1710 aa31.55■■■□□ 2.64
UBE2D4-205ENST00000443780 NCOA1Q15788 1441 aa31.54■■■□□ 2.64
UBE2D4-205ENST00000443780 ANKRD30AQ9BXX3 1397 aa31.54■■■□□ 2.64
UBE2D4-205ENST00000443780 CFAP65Q6ZU64 1925 aaKnown RBP31.53■■■□□ 2.64
UBE2D4-205ENST00000443780 TNRQ92752 1358 aa31.51■■■□□ 2.63
UBE2D4-205ENST00000443780 A2ML1A8K2U0 1454 aa31.5■■■□□ 2.63
UBE2D4-205ENST00000443780 PTPRTO14522 1441 aa31.49■■■□□ 2.63
UBE2D4-205ENST00000443780 ADGRL2O95490 1459 aa31.48■■■□□ 2.63
UBE2D4-205ENST00000443780 DEPDC5O75140 1603 aa31.48■■■□□ 2.63
UBE2D4-205ENST00000443780 PRDM15P57071 1507 aaPredicted RBP31.48■■■□□ 2.63
UBE2D4-205ENST00000443780 PPARGC1BQ86YN6 1023 aaKnown RBP31.45■■■□□ 2.63
UBE2D4-205ENST00000443780 PLA2R1Q13018 1463 aa31.45■■■□□ 2.62
UBE2D4-205ENST00000443780 SPATA31D1Q6ZQQ2 1576 aa31.4■■■□□ 2.62
UBE2D4-205ENST00000443780 FBXO41Q8TF61 875 aa31.4■■■□□ 2.62
UBE2D4-205ENST00000443780 NCKAP5LQ9HCH0 1330 aa31.4■■■□□ 2.62
UBE2D4-205ENST00000443780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.39■■■□□ 2.62
UBE2D4-205ENST00000443780 NLRP1Q9C000 1473 aa31.39■■■□□ 2.62
UBE2D4-205ENST00000443780 PKD2Q13563 968 aa31.37■■■□□ 2.61
UBE2D4-205ENST00000443780 CERKQ8TCT0 537 aa31.37■■■□□ 2.61
UBE2D4-205ENST00000443780 ERVK-7P63135 1459 aa31.37■■■□□ 2.61
UBE2D4-205ENST00000443780 KANK1Q14678 1352 aa31.36■■■□□ 2.61
UBE2D4-205ENST00000443780 ARHGAP31Q2M1Z3 1444 aa31.34■■■□□ 2.61
UBE2D4-205ENST00000443780 POLR1AO95602 1720 aaPredicted RBP31.33■■■□□ 2.61
UBE2D4-205ENST00000443780 VWDEQ8N2E2 1590 aa31.33■■■□□ 2.61
UBE2D4-205ENST00000443780 ANKRD50Q9ULJ7 1429 aa31.32■■■□□ 2.6
UBE2D4-205ENST00000443780 UGGT1Q9NYU2 1555 aa31.31■■■□□ 2.6
UBE2D4-205ENST00000443780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.3■■■□□ 2.6
UBE2D4-205ENST00000443780 LMTK2Q8IWU2 1503 aa31.29■■■□□ 2.6
UBE2D4-205ENST00000443780 THEMISQ8N1K5 641 aaPredicted RBP31.28■■■□□ 2.6
UBE2D4-205ENST00000443780 LTBP4Q8N2S1 1624 aa31.26■■■□□ 2.59
UBE2D4-205ENST00000443780 ROCK1Q13464 1354 aa31.26■■■□□ 2.59
UBE2D4-205ENST00000443780 NEURL4Q96JN8 1562 aa31.23■■■□□ 2.59
UBE2D4-205ENST00000443780 UBR1Q8IWV7 1749 aa31.23■■■□□ 2.59
UBE2D4-205ENST00000443780 ITGAEP38570 1179 aa31.22■■■□□ 2.59
UBE2D4-205ENST00000443780 EFCAB6Q5THR3 1501 aa31.2■■■□□ 2.59
UBE2D4-205ENST00000443780 ANKLE2Q86XL3 938 aa31.2■■■□□ 2.59
UBE2D4-205ENST00000443780 UNC13BO14795 1591 aa31.17■■■□□ 2.58
UBE2D4-205ENST00000443780 RRBP1Q9P2E9 1410 aaKnown RBP31.17■■■□□ 2.58
UBE2D4-205ENST00000443780 ZNF335Q9H4Z2 1342 aaPredicted RBP31.16■■■□□ 2.58
UBE2D4-205ENST00000443780 TET3O43151 1660 aa31.15■■■□□ 2.58
UBE2D4-205ENST00000443780 PIK3C2BO00750 1634 aa31.14■■■□□ 2.58
UBE2D4-205ENST00000443780 GCC2Q8IWJ2 1684 aa31.13■■■□□ 2.57
UBE2D4-205ENST00000443780 MED14O60244 1454 aa31.12■■■□□ 2.57
UBE2D4-205ENST00000443780 SYNMO15061 1565 aa31.11■■■□□ 2.57
UBE2D4-205ENST00000443780 NOS1P29475 1434 aa31.1■■■□□ 2.57
UBE2D4-205ENST00000443780 NPHP4O75161 1426 aaPredicted RBP31.09■■■□□ 2.57
UBE2D4-205ENST00000443780 KDM5AP29375 1690 aaKnown RBP31.09■■■□□ 2.57
UBE2D4-205ENST00000443780 IQGAP1P46940 1657 aa31.09■■■□□ 2.57
UBE2D4-205ENST00000443780 IQSEC2Q5JU85 1478 aa31.08■■■□□ 2.57
UBE2D4-205ENST00000443780 RPRD2Q5VT52 1461 aaKnown RBP31.08■■■□□ 2.57
UBE2D4-205ENST00000443780 IQGAP3Q86VI3 1631 aa31.06■■■□□ 2.56
UBE2D4-205ENST00000443780 SLIT1O75093 1534 aa31.05■■■□□ 2.56
UBE2D4-205ENST00000443780 IDI1Q13907 227 aa31.05■■■□□ 2.56
UBE2D4-205ENST00000443780 ARHGAP23Q9P227 1491 aa31.05■■■□□ 2.56
UBE2D4-205ENST00000443780 E9PCH4 1651 aa31.03■■■□□ 2.56
UBE2D4-205ENST00000443780 STAG3Q9UJ98 1225 aa31.02■■■□□ 2.56
UBE2D4-205ENST00000443780 SCAF11Q99590 1463 aaKnown RBP31.01■■■□□ 2.56
UBE2D4-205ENST00000443780 SLC52A1Q9NWF4 448 aa31■■■□□ 2.55
UBE2D4-205ENST00000443780 LTKP29376 864 aa30.99■■■□□ 2.55
UBE2D4-205ENST00000443780 NUP155O75694 1391 aa30.99■■■□□ 2.55
UBE2D4-205ENST00000443780 TXNDC2Q86VQ3 553 aa30.98■■■□□ 2.55
UBE2D4-205ENST00000443780 TMEM2Q9UHN6 1383 aa30.97■■■□□ 2.55
UBE2D4-205ENST00000443780 MYO5BQ9ULV0 1848 aa30.96■■■□□ 2.55
UBE2D4-205ENST00000443780 ADGRB3O60242 1522 aa30.96■■■□□ 2.55
UBE2D4-205ENST00000443780 CPS1P31327 1500 aa30.95■■■□□ 2.55
UBE2D4-205ENST00000443780 EID1Q9Y6B2 187 aa30.95■■■□□ 2.55
UBE2D4-205ENST00000443780 NAIPQ13075 1403 aa30.91■■■□□ 2.54
UBE2D4-205ENST00000443780 STRCP1A6NGW2 1772 aa30.91■■■□□ 2.54
UBE2D4-205ENST00000443780 TMEM131LA2VDJ0 1609 aa30.87■■■□□ 2.53
UBE2D4-205ENST00000443780 HFM1A2PYH4 1435 aa30.83■■■□□ 2.53
UBE2D4-205ENST00000443780 UBAP1LF5GYI3 381 aa30.82■■■□□ 2.52
UBE2D4-205ENST00000443780 SPHKAPQ2M3C7 1700 aa30.81■■■□□ 2.52
UBE2D4-205ENST00000443780 ZFYVE9O95405 1425 aa30.78■■■□□ 2.52
UBE2D4-205ENST00000443780 CHGAP10645 457 aaKnown RBP30.76■■■□□ 2.51
UBE2D4-205ENST00000443780 RIMS2Q9UQ26 1411 aa30.75■■■□□ 2.51
UBE2D4-205ENST00000443780 LRRC7Q96NW7 1537 aa30.75■■■□□ 2.51
UBE2D4-205ENST00000443780 HDGFP51858 240 aaKnown RBP30.72■■■□□ 2.51
UBE2D4-205ENST00000443780 SLC26A8Q96RN1 970 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms