RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PRDM15P57071 1507 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-212ENST00000443561 ILDR1Q86SU0 546 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-212ENST00000443561 RRP7BPQ9NSQ0 103 aa19.78■□□□□ 0.76
PDLIM2-212ENST00000443561 ANKRD30AQ9BXX3 1397 aa19.78■□□□□ 0.76
PDLIM2-212ENST00000443561 VWDEQ8N2E2 1590 aa19.77■□□□□ 0.76
PDLIM2-212ENST00000443561 ABCC3O15438 1527 aa19.76■□□□□ 0.75
PDLIM2-212ENST00000443561 KDM5DQ9BY66 1539 aa19.76■□□□□ 0.75
PDLIM2-212ENST00000443561 FAM135AQ9P2D6 1515 aa19.76■□□□□ 0.75
PDLIM2-212ENST00000443561 KIF3BO15066 747 aa19.76■□□□□ 0.75
PDLIM2-212ENST00000443561 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-212ENST00000443561 GCC2Q8IWJ2 1684 aa19.75■□□□□ 0.75
PDLIM2-212ENST00000443561 ROCK1Q13464 1354 aa19.75■□□□□ 0.75
PDLIM2-212ENST00000443561 CEBPAP49715 358 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-212ENST00000443561 GGT6Q6P531 493 aa19.74■□□□□ 0.75
PDLIM2-212ENST00000443561 CNTLNQ9NXG0 1405 aa19.74■□□□□ 0.75
PDLIM2-212ENST00000443561 UNC13BO14795 1591 aa19.73■□□□□ 0.75
PDLIM2-212ENST00000443561 CAMSAP1Q5T5Y3 1602 aa19.73■□□□□ 0.75
PDLIM2-212ENST00000443561 LMTK3Q96Q04 1460 aa19.72■□□□□ 0.75
PDLIM2-212ENST00000443561 PREX1Q8TCU6 1659 aa19.71■□□□□ 0.75
PDLIM2-212ENST00000443561 ANKRD50Q9ULJ7 1429 aa19.7■□□□□ 0.74
PDLIM2-212ENST00000443561 ITGAEP38570 1179 aa19.7■□□□□ 0.74
PDLIM2-212ENST00000443561 ZMYM3Q14202 1370 aa19.7■□□□□ 0.74
PDLIM2-212ENST00000443561 NAIPQ13075 1403 aa19.67■□□□□ 0.74
PDLIM2-212ENST00000443561 LMTK2Q8IWU2 1503 aa19.66■□□□□ 0.74
PDLIM2-212ENST00000443561 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
PDLIM2-212ENST00000443561 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
PDLIM2-212ENST00000443561 SETD1BQ9UPS6 1966 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-212ENST00000443561 PZPP20742 1482 aa19.66■□□□□ 0.74
PDLIM2-212ENST00000443561 PPP6R1Q9UPN7 881 aa19.65■□□□□ 0.74
PDLIM2-212ENST00000443561 ZNF142P52746 1687 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-212ENST00000443561 CFAP65Q6ZU64 1925 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-212ENST00000443561 IQGAP3Q86VI3 1631 aa19.63■□□□□ 0.73
PDLIM2-212ENST00000443561 NPATQ14207 1427 aa19.63■□□□□ 0.73
PDLIM2-212ENST00000443561 SPATA31D1Q6ZQQ2 1576 aa19.62■□□□□ 0.73
PDLIM2-212ENST00000443561 HFM1A2PYH4 1435 aa19.62■□□□□ 0.73
PDLIM2-212ENST00000443561 EFCAB6Q5THR3 1501 aa19.61■□□□□ 0.73
PDLIM2-212ENST00000443561 TET3O43151 1660 aa19.61■□□□□ 0.73
PDLIM2-212ENST00000443561 WASHC2CQ9Y4E1 1318 aa19.59■□□□□ 0.73
PDLIM2-212ENST00000443561 FBXO31Q5XUX0 539 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-212ENST00000443561 ERVK-7P63135 1459 aa19.59■□□□□ 0.73
PDLIM2-212ENST00000443561 E9PCH4 1651 aa19.58■□□□□ 0.72
PDLIM2-212ENST00000443561 ARHGAP31Q2M1Z3 1444 aa19.58■□□□□ 0.72
PDLIM2-212ENST00000443561 ESF1Q9H501 851 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-212ENST00000443561 SYNMO15061 1565 aa19.56■□□□□ 0.72
PDLIM2-212ENST00000443561 CEP170BQ9Y4F5 1589 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-212ENST00000443561 STRCQ7RTU9 1775 aa19.55■□□□□ 0.72
PDLIM2-212ENST00000443561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.72
PDLIM2-212ENST00000443561 UHRF1BP1Q6BDS2 1440 aa19.53■□□□□ 0.72
PDLIM2-212ENST00000443561 HSPA2P54652 639 aa19.52■□□□□ 0.72
PDLIM2-212ENST00000443561 TNRQ92752 1358 aa19.51■□□□□ 0.71
PDLIM2-212ENST00000443561 NOS1P29475 1434 aa19.5■□□□□ 0.71
PDLIM2-212ENST00000443561 A2ML1A8K2U0 1454 aa19.49■□□□□ 0.71
PDLIM2-212ENST00000443561 KANK1Q14678 1352 aa19.49■□□□□ 0.71
PDLIM2-212ENST00000443561 UBR1Q8IWV7 1749 aa19.48■□□□□ 0.71
PDLIM2-212ENST00000443561 PIK3C2BO00750 1634 aa19.47■□□□□ 0.71
PDLIM2-212ENST00000443561 RPRD2Q5VT52 1461 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-212ENST00000443561 NUP155O75694 1391 aa19.45■□□□□ 0.7
PDLIM2-212ENST00000443561 UGGT1Q9NYU2 1555 aa19.45■□□□□ 0.7
PDLIM2-212ENST00000443561 NLRP1Q9C000 1473 aa19.45■□□□□ 0.7
PDLIM2-212ENST00000443561 MYO5BQ9ULV0 1848 aa19.44■□□□□ 0.7
PDLIM2-212ENST00000443561 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
PDLIM2-212ENST00000443561 NEURL4Q96JN8 1562 aa19.41■□□□□ 0.7
PDLIM2-212ENST00000443561 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
PDLIM2-212ENST00000443561 KDM5AP29375 1690 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-212ENST00000443561 POLR1AO95602 1720 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-212ENST00000443561 PLA2R1Q13018 1463 aa19.4■□□□□ 0.7
PDLIM2-212ENST00000443561 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
PDLIM2-212ENST00000443561 PTPRTO14522 1441 aa19.37■□□□□ 0.69
PDLIM2-212ENST00000443561 TMEM131LA2VDJ0 1609 aa19.36■□□□□ 0.69
PDLIM2-212ENST00000443561 CLTCL1P53675 1640 aa19.36■□□□□ 0.69
PDLIM2-212ENST00000443561 ADGRB3O60242 1522 aa19.36■□□□□ 0.69
PDLIM2-212ENST00000443561 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
PDLIM2-212ENST00000443561 TRPM2O94759 1503 aa19.34■□□□□ 0.69
PDLIM2-212ENST00000443561 IDI1Q13907 227 aa19.33■□□□□ 0.68
PDLIM2-212ENST00000443561 SLIT1O75093 1534 aa19.33■□□□□ 0.68
PDLIM2-212ENST00000443561 NCKAP5LQ9HCH0 1330 aa19.29■□□□□ 0.68
PDLIM2-212ENST00000443561 TRIM52Q96A61 297 aa19.28■□□□□ 0.68
PDLIM2-212ENST00000443561 PKD2Q13563 968 aa19.27■□□□□ 0.68
PDLIM2-212ENST00000443561 FOXD1Q16676 465 aa19.26■□□□□ 0.67
PDLIM2-212ENST00000443561 MED14O60244 1454 aa19.26■□□□□ 0.67
PDLIM2-212ENST00000443561 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
PDLIM2-212ENST00000443561 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
PDLIM2-212ENST00000443561 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-212ENST00000443561 KIF1BO60333 1816 aa19.23■□□□□ 0.67
PDLIM2-212ENST00000443561 MPHOSPH9Q99550 1183 aa19.23■□□□□ 0.67
PDLIM2-212ENST00000443561 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
PDLIM2-212ENST00000443561 SCAF11Q99590 1463 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-212ENST00000443561 TMEM2Q9UHN6 1383 aa19.22■□□□□ 0.67
PDLIM2-212ENST00000443561 LTKP29376 864 aa19.22■□□□□ 0.67
PDLIM2-212ENST00000443561 STRCP1A6NGW2 1772 aa19.21■□□□□ 0.67
PDLIM2-212ENST00000443561 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-212ENST00000443561 LTBP4Q8N2S1 1624 aa19.21■□□□□ 0.67
PDLIM2-212ENST00000443561 NPHP4O75161 1426 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-212ENST00000443561 NEXMIFQ5QGS0 1516 aa19.19■□□□□ 0.66
PDLIM2-212ENST00000443561 HRCP23327 699 aa19.18■□□□□ 0.66
PDLIM2-212ENST00000443561 NRXN3Q9Y4C0 1643 aa19.18■□□□□ 0.66
PDLIM2-212ENST00000443561 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
PDLIM2-212ENST00000443561 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
PDLIM2-212ENST00000443561 PPLO60437 1756 aa19.16■□□□□ 0.66
PDLIM2-212ENST00000443561 ANKLE2Q86XL3 938 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms