RNA–Protein interactions for RNA: ENST00000442343.1

RPSAP40-201, Transcript of ribosomal protein SA pseudogene 40, humanhuman

BASIC

Gene RPSAP40, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP40-201ENST00000442343 SUPT6HQ7KZ85 1726 aaKnown RBP10.58□□□□□ -0.72
RPSAP40-201ENST00000442343 MED1Q15648 1581 aaPredicted RBP10.58□□□□□ -0.72
RPSAP40-201ENST00000442343 MYO3AQ8NEV4 1616 aa10.58□□□□□ -0.72
RPSAP40-201ENST00000442343 CEP170BQ9Y4F5 1589 aaPredicted RBP10.57□□□□□ -0.72
RPSAP40-201ENST00000442343 ARHGAP35Q9NRY4 1499 aa10.56□□□□□ -0.72
RPSAP40-201ENST00000442343 ATP1B4Q9UN42 357 aaPredicted RBP10.56□□□□□ -0.72
RPSAP40-201ENST00000442343 CPS1P31327 1500 aa10.56□□□□□ -0.72
RPSAP40-201ENST00000442343 SAMD9LQ8IVG5 1584 aa10.56□□□□□ -0.72
RPSAP40-201ENST00000442343 LRRIQ1Q96JM4 1722 aa10.55□□□□□ -0.72
RPSAP40-201ENST00000442343 TOM1O60784 492 aa10.55□□□□□ -0.72
RPSAP40-201ENST00000442343 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.55□□□□□ -0.72
RPSAP40-201ENST00000442343 PTPRKQ15262 1439 aa10.55□□□□□ -0.72
RPSAP40-201ENST00000442343 PLXNC1O60486 1568 aa10.55□□□□□ -0.72
RPSAP40-201ENST00000442343 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
RPSAP40-201ENST00000442343 CLTCQ00610 1675 aaKnown RBP10.54□□□□□ -0.72
RPSAP40-201ENST00000442343 HSPA1LP34931 641 aa10.54□□□□□ -0.72
RPSAP40-201ENST00000442343 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
RPSAP40-201ENST00000442343 CCDC18Q5T9S5 1454 aa10.54□□□□□ -0.72
RPSAP40-201ENST00000442343 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
RPSAP40-201ENST00000442343 A2ML1A8K2U0 1454 aa10.52□□□□□ -0.73
RPSAP40-201ENST00000442343 POLR1AO95602 1720 aaPredicted RBP10.52□□□□□ -0.73
RPSAP40-201ENST00000442343 SPAG9O60271 1321 aaKnown RBP10.52□□□□□ -0.73
RPSAP40-201ENST00000442343 DNMT1P26358 1616 aaKnown RBP10.51□□□□□ -0.73
RPSAP40-201ENST00000442343 KIAA1107Q9UPP5 1409 aa10.51□□□□□ -0.73
RPSAP40-201ENST00000442343 SHANK2Q9UPX8 1470 aa10.51□□□□□ -0.73
RPSAP40-201ENST00000442343 ZBTB12Q9Y330 459 aaPredicted RBP10.51□□□□□ -0.73
RPSAP40-201ENST00000442343 A2MP01023 1474 aa10.5□□□□□ -0.73
RPSAP40-201ENST00000442343 ATP7AQ04656 1500 aa10.5□□□□□ -0.73
RPSAP40-201ENST00000442343 INO80Q9ULG1 1556 aaPredicted RBP10.5□□□□□ -0.73
RPSAP40-201ENST00000442343 CASKIN1Q8WXD9 1431 aa10.5□□□□□ -0.73
RPSAP40-201ENST00000442343 PLEKHH2Q8IVE3 1493 aa10.49□□□□□ -0.73
RPSAP40-201ENST00000442343 SYCP2Q9BX26 1530 aa10.48□□□□□ -0.73
RPSAP40-201ENST00000442343 NEURL4Q96JN8 1562 aa10.48□□□□□ -0.73
RPSAP40-201ENST00000442343 ADGBQ8N7X0 1667 aa10.48□□□□□ -0.73
RPSAP40-201ENST00000442343 UBTFP17480 764 aaKnown RBP10.48□□□□□ -0.73
RPSAP40-201ENST00000442343 PIP4K2BP78356 416 aa10.48□□□□□ -0.73
RPSAP40-201ENST00000442343 FAM135AQ9P2D6 1515 aa10.48□□□□□ -0.73
RPSAP40-201ENST00000442343 GPATCH8Q9UKJ3 1502 aaKnown RBP10.48□□□□□ -0.73
RPSAP40-201ENST00000442343 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
RPSAP40-201ENST00000442343 MED14O60244 1454 aa10.47□□□□□ -0.73
RPSAP40-201ENST00000442343 VWDEQ8N2E2 1590 aa10.46□□□□□ -0.74
RPSAP40-201ENST00000442343 DEPDC5O75140 1603 aa10.46□□□□□ -0.74
RPSAP40-201ENST00000442343 ALKQ9UM73 1620 aa10.46□□□□□ -0.74
RPSAP40-201ENST00000442343 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.74
RPSAP40-201ENST00000442343 GGT6Q6P531 493 aa10.45□□□□□ -0.74
RPSAP40-201ENST00000442343 ANKLE2Q86XL3 938 aa10.44□□□□□ -0.74
RPSAP40-201ENST00000442343 THEMISQ8N1K5 641 aaPredicted RBP10.44□□□□□ -0.74
RPSAP40-201ENST00000442343 FYCO1Q9BQS8 1478 aa10.43□□□□□ -0.74
RPSAP40-201ENST00000442343 RTEL1-TNFRSF6BF6WH68 1400 aa10.43□□□□□ -0.74
RPSAP40-201ENST00000442343 TNRQ92752 1358 aa10.43□□□□□ -0.74
RPSAP40-201ENST00000442343 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
RPSAP40-201ENST00000442343 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
RPSAP40-201ENST00000442343 PZPP20742 1482 aa10.42□□□□□ -0.74
RPSAP40-201ENST00000442343 NLRP1Q9C000 1473 aa10.42□□□□□ -0.74
RPSAP40-201ENST00000442343 POLA2Q14181 598 aa10.42□□□□□ -0.74
RPSAP40-201ENST00000442343 KLHL34Q8N239 644 aa10.42□□□□□ -0.74
RPSAP40-201ENST00000442343 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
RPSAP40-201ENST00000442343 DHX29Q7Z478 1369 aaKnown RBP10.41□□□□□ -0.74
RPSAP40-201ENST00000442343 SYNMO15061 1565 aa10.41□□□□□ -0.74
RPSAP40-201ENST00000442343 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
RPSAP40-201ENST00000442343 TAOK2Q9UL54 1235 aa10.41□□□□□ -0.74
RPSAP40-201ENST00000442343 NPHP4O75161 1426 aaPredicted RBP10.41□□□□□ -0.74
RPSAP40-201ENST00000442343 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.74
RPSAP40-201ENST00000442343 KDM5DQ9BY66 1539 aa10.4□□□□□ -0.74
RPSAP40-201ENST00000442343 IQGAP1P46940 1657 aa10.4□□□□□ -0.74
RPSAP40-201ENST00000442343 UGGT1Q9NYU2 1555 aa10.39□□□□□ -0.75
RPSAP40-201ENST00000442343 LRRC7Q96NW7 1537 aa10.39□□□□□ -0.75
RPSAP40-201ENST00000442343 MIA2Q96PC5 1412 aa10.39□□□□□ -0.75
RPSAP40-201ENST00000442343 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
RPSAP40-201ENST00000442343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
RPSAP40-201ENST00000442343 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
RPSAP40-201ENST00000442343 FBXO31Q5XUX0 539 aaPredicted RBP10.38□□□□□ -0.75
RPSAP40-201ENST00000442343 RGS17Q9UGC6 210 aaPredicted RBP10.38□□□□□ -0.75
RPSAP40-201ENST00000442343 STRCP1A6NGW2 1772 aa10.37□□□□□ -0.75
RPSAP40-201ENST00000442343 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
RPSAP40-201ENST00000442343 WASHC2CQ9Y4E1 1318 aa10.35□□□□□ -0.75
RPSAP40-201ENST00000442343 RSPH4AQ5TD94 716 aa10.35□□□□□ -0.75
RPSAP40-201ENST00000442343 KIF3BO15066 747 aa10.34□□□□□ -0.75
RPSAP40-201ENST00000442343 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
RPSAP40-201ENST00000442343 FAM135BQ49AJ0 1406 aa10.33□□□□□ -0.76
RPSAP40-201ENST00000442343 TIAM1Q13009 1591 aa10.32□□□□□ -0.76
RPSAP40-201ENST00000442343 MTUS2Q5JR59 1369 aa10.32□□□□□ -0.76
RPSAP40-201ENST00000442343 CAPN15O75808 1086 aa10.32□□□□□ -0.76
RPSAP40-201ENST00000442343 SRCAPQ6ZRS2 3230 aa10.32□□□□□ -0.76
RPSAP40-201ENST00000442343 ZNF644Q9H582 1327 aaPredicted RBP10.32□□□□□ -0.76
RPSAP40-201ENST00000442343 CCDC141Q6ZP82 1450 aa10.31□□□□□ -0.76
RPSAP40-201ENST00000442343 XIRP1Q702N8 1843 aaKnown RBP10.31□□□□□ -0.76
RPSAP40-201ENST00000442343 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
RPSAP40-201ENST00000442343 CEP162Q5TB80 1403 aa10.3□□□□□ -0.76
RPSAP40-201ENST00000442343 UBR1Q8IWV7 1749 aa10.3□□□□□ -0.76
RPSAP40-201ENST00000442343 EHBP1L1Q8N3D4 1523 aa10.29□□□□□ -0.76
RPSAP40-201ENST00000442343 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
RPSAP40-201ENST00000442343 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
RPSAP40-201ENST00000442343 SCAF11Q99590 1463 aaKnown RBP10.29□□□□□ -0.76
RPSAP40-201ENST00000442343 ARHGAP23Q9P227 1491 aa10.29□□□□□ -0.76
RPSAP40-201ENST00000442343 SLIT1O75093 1534 aa10.28□□□□□ -0.76
RPSAP40-201ENST00000442343 ARHGEF5Q12774 1597 aa10.28□□□□□ -0.76
RPSAP40-201ENST00000442343 ERVK-7P63135 1459 aa10.28□□□□□ -0.76
RPSAP40-201ENST00000442343 ABCC3O15438 1527 aa10.28□□□□□ -0.76
RPSAP40-201ENST00000442343 PLCD3Q8N3E9 789 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms