RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 ZNF142P52746 1687 aaPredicted RBP25.93■■□□□ 1.74
IRF3-204ENST00000442265 WASHC2CQ9Y4E1 1318 aa25.93■■□□□ 1.74
IRF3-204ENST00000442265 PZPP20742 1482 aa25.93■■□□□ 1.74
IRF3-204ENST00000442265 MYO3AQ8NEV4 1616 aa25.93■■□□□ 1.74
IRF3-204ENST00000442265 FGD6Q6ZV73 1430 aa25.93■■□□□ 1.74
IRF3-204ENST00000442265 TCOF1Q13428 1488 aaKnown RBP25.92■■□□□ 1.74
IRF3-204ENST00000442265 SHANK2Q9UPX8 1470 aa25.92■■□□□ 1.74
IRF3-204ENST00000442265 ABCC5O15440 1437 aa25.92■■□□□ 1.74
IRF3-204ENST00000442265 RNF17Q9BXT8 1623 aaKnown RBP25.92■■□□□ 1.74
IRF3-204ENST00000442265 CEP170BQ9Y4F5 1589 aaPredicted RBP25.91■■□□□ 1.74
IRF3-204ENST00000442265 CAMSAP1Q5T5Y3 1602 aa25.91■■□□□ 1.74
IRF3-204ENST00000442265 PTPN23Q9H3S7 1636 aa25.91■■□□□ 1.74
IRF3-204ENST00000442265 PLA2R1Q13018 1463 aa25.91■■□□□ 1.74
IRF3-204ENST00000442265 EIF2AK4Q9P2K8 1649 aaKnown RBP25.9■■□□□ 1.74
IRF3-204ENST00000442265 DUOX2Q9NRD8 1548 aa25.88■■□□□ 1.73
IRF3-204ENST00000442265 A2ML1A8K2U0 1454 aa25.88■■□□□ 1.73
IRF3-204ENST00000442265 FBXO31Q5XUX0 539 aaPredicted RBP25.87■■□□□ 1.73
IRF3-204ENST00000442265 TNRQ92752 1358 aa25.85■■□□□ 1.73
IRF3-204ENST00000442265 PKD2Q13563 968 aa25.85■■□□□ 1.73
IRF3-204ENST00000442265 DAPK1P53355 1430 aa25.85■■□□□ 1.73
IRF3-204ENST00000442265 CROCC2H7BZ55 1655 aa25.83■■□□□ 1.73
IRF3-204ENST00000442265 ABCC3O15438 1527 aa25.83■■□□□ 1.73
IRF3-204ENST00000442265 KIF15Q9NS87 1388 aa25.83■■□□□ 1.73
IRF3-204ENST00000442265 DNMT1P26358 1616 aaKnown RBP25.83■■□□□ 1.73
IRF3-204ENST00000442265 MROH1Q8NDA8 1641 aa25.83■■□□□ 1.73
IRF3-204ENST00000442265 ERBINQ96RT1 1412 aa25.81■■□□□ 1.72
IRF3-204ENST00000442265 ZC3H13Q5T200 1668 aaKnown RBP25.81■■□□□ 1.72
IRF3-204ENST00000442265 NCKAP5LQ9HCH0 1330 aa25.8■■□□□ 1.72
IRF3-204ENST00000442265 NLRP1Q9C000 1473 aa25.79■■□□□ 1.72
IRF3-204ENST00000442265 LTBP4Q8N2S1 1624 aa25.78■■□□□ 1.72
IRF3-204ENST00000442265 RRP7BPQ9NSQ0 103 aa25.77■■□□□ 1.72
IRF3-204ENST00000442265 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
IRF3-204ENST00000442265 ANKRD30AQ9BXX3 1397 aa25.75■■□□□ 1.71
IRF3-204ENST00000442265 SPATA31D1Q6ZQQ2 1576 aa25.74■■□□□ 1.71
IRF3-204ENST00000442265 ARHGAP31Q2M1Z3 1444 aa25.72■■□□□ 1.71
IRF3-204ENST00000442265 ADGRL2O95490 1459 aa25.72■■□□□ 1.71
IRF3-204ENST00000442265 THEMISQ8N1K5 641 aaPredicted RBP25.71■■□□□ 1.71
IRF3-204ENST00000442265 ERVK-7P63135 1459 aa25.71■■□□□ 1.71
IRF3-204ENST00000442265 IQSEC2Q5JU85 1478 aa25.71■■□□□ 1.71
IRF3-204ENST00000442265 DEPDC5O75140 1603 aa25.7■■□□□ 1.71
IRF3-204ENST00000442265 CHIC2Q9UKJ5 165 aa25.68■■□□□ 1.7
IRF3-204ENST00000442265 UGGT1Q9NYU2 1555 aa25.68■■□□□ 1.7
IRF3-204ENST00000442265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.66■■□□□ 1.79e-6■□□□□ 9.6
IRF3-204ENST00000442265 CEP152O94986 1710 aa25.66■■□□□ 1.7
IRF3-204ENST00000442265 NEURL4Q96JN8 1562 aa25.65■■□□□ 1.7
IRF3-204ENST00000442265 ZNF335Q9H4Z2 1342 aaPredicted RBP25.64■■□□□ 1.7
IRF3-204ENST00000442265 FAM50AQ14320 339 aaKnown RBP25.64■■□□□ 1.7
IRF3-204ENST00000442265 ANKLE2Q86XL3 938 aa25.64■■□□□ 1.7
IRF3-204ENST00000442265 VWDEQ8N2E2 1590 aa25.64■■□□□ 1.69
IRF3-204ENST00000442265 LMTK2Q8IWU2 1503 aa25.63■■□□□ 1.69
IRF3-204ENST00000442265 KANK1Q14678 1352 aa25.63■■□□□ 1.69
IRF3-204ENST00000442265 MED14O60244 1454 aa25.62■■□□□ 1.69
IRF3-204ENST00000442265 POLR1AO95602 1720 aaPredicted RBP25.6■■□□□ 1.69
IRF3-204ENST00000442265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.59■■□□□ 1.69
IRF3-204ENST00000442265 ANKRD50Q9ULJ7 1429 aa25.56■■□□□ 1.68
IRF3-204ENST00000442265 NPHP4O75161 1426 aaPredicted RBP25.54■■□□□ 1.68
IRF3-204ENST00000442265 ROCK1Q13464 1354 aa25.53■■□□□ 1.68
IRF3-204ENST00000442265 UBR1Q8IWV7 1749 aa25.52■■□□□ 1.68
IRF3-204ENST00000442265 ARHGAP23Q9P227 1491 aa25.51■■□□□ 1.67
IRF3-204ENST00000442265 SLIT1O75093 1534 aa25.5■■□□□ 1.67
IRF3-204ENST00000442265 EFCAB6Q5THR3 1501 aa25.5■■□□□ 1.67
IRF3-204ENST00000442265 CPS1P31327 1500 aa25.49■■□□□ 1.67
IRF3-204ENST00000442265 NOS1P29475 1434 aa25.49■■□□□ 1.67
IRF3-204ENST00000442265 CFAP65Q6ZU64 1925 aaKnown RBP25.47■■□□□ 1.67
IRF3-204ENST00000442265 RPRD2Q5VT52 1461 aaKnown RBP25.46■■□□□ 1.67
IRF3-204ENST00000442265 SCAF11Q99590 1463 aaKnown RBP25.46■■□□□ 1.67
IRF3-204ENST00000442265 IQGAP1P46940 1657 aa25.45■■□□□ 1.67
IRF3-204ENST00000442265 IDI1Q13907 227 aa25.44■■□□□ 1.66
IRF3-204ENST00000442265 KDM5AP29375 1690 aaKnown RBP25.44■■□□□ 1.66
IRF3-204ENST00000442265 SYNMO15061 1565 aa25.44■■□□□ 1.66
IRF3-204ENST00000442265 LTKP29376 864 aa25.43■■□□□ 1.66
IRF3-204ENST00000442265 PIK3C2BO00750 1634 aa25.43■■□□□ 1.66
IRF3-204ENST00000442265 SLC52A1Q9NWF4 448 aa25.42■■□□□ 1.66
IRF3-204ENST00000442265 TMEM2Q9UHN6 1383 aa25.42■■□□□ 1.66
IRF3-204ENST00000442265 UNC13BO14795 1591 aa25.41■■□□□ 1.66
IRF3-204ENST00000442265 UBAP1LF5GYI3 381 aa25.4■■□□□ 1.66
IRF3-204ENST00000442265 TXNDC2Q86VQ3 553 aa25.4■■□□□ 1.66
IRF3-204ENST00000442265 EID1Q9Y6B2 187 aa25.39■■□□□ 1.66
IRF3-204ENST00000442265 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
IRF3-204ENST00000442265 TET3O43151 1660 aa25.38■■□□□ 1.65
IRF3-204ENST00000442265 STAG3Q9UJ98 1225 aa25.35■■□□□ 1.65
IRF3-204ENST00000442265 RRBP1Q9P2E9 1410 aaKnown RBP25.35■■□□□ 1.65
IRF3-204ENST00000442265 ADGRB3O60242 1522 aa25.33■■□□□ 1.65
IRF3-204ENST00000442265 GCC2Q8IWJ2 1684 aa25.31■■□□□ 1.64
IRF3-204ENST00000442265 IQGAP3Q86VI3 1631 aa25.3■■□□□ 1.64
IRF3-204ENST00000442265 ITGAEP38570 1179 aa25.3■■□□□ 1.64
IRF3-204ENST00000442265 LRRC7Q96NW7 1537 aa25.3■■□□□ 1.64
IRF3-204ENST00000442265 STRCP1A6NGW2 1772 aa25.29■■□□□ 1.64
IRF3-204ENST00000442265 TOM1O60784 492 aa25.29■■□□□ 1.64
IRF3-204ENST00000442265 NUP155O75694 1391 aa25.27■■□□□ 1.64
IRF3-204ENST00000442265 E9PCH4 1651 aa25.24■■□□□ 1.63
IRF3-204ENST00000442265 ZFYVE9O95405 1425 aa25.24■■□□□ 1.63
IRF3-204ENST00000442265 ALKQ9UM73 1620 aa25.23■■□□□ 1.63
IRF3-204ENST00000442265 TMEM131LA2VDJ0 1609 aa25.22■■□□□ 1.63
IRF3-204ENST00000442265 HDGFP51858 240 aaKnown RBP25.18■■□□□ 1.62
IRF3-204ENST00000442265 NAIPQ13075 1403 aa25.18■■□□□ 1.62
IRF3-204ENST00000442265 PLEKHG1Q9ULL1 1385 aa25.18■■□□□ 1.62
IRF3-204ENST00000442265 KCNA6P17658 529 aa25.17■■□□□ 1.62
IRF3-204ENST00000442265 PIP4K2BP78356 416 aa25.17■■□□□ 1.62
IRF3-204ENST00000442265 RIMS2Q9UQ26 1411 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms