RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 VWDEQ8N2E2 1590 aa10.57□□□□□ -0.72
LMO3-208ENST00000441439 ABCC5O15440 1437 aa10.56□□□□□ -0.72
LMO3-208ENST00000441439 UHRF1BP1Q6BDS2 1440 aa10.56□□□□□ -0.72
LMO3-208ENST00000441439 ATP10BO94823 1461 aa10.56□□□□□ -0.72
LMO3-208ENST00000441439 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
LMO3-208ENST00000441439 ARHGEF12Q9NZN5 1544 aa10.55□□□□□ -0.72
LMO3-208ENST00000441439 BACH2Q9BYV9 841 aa10.55□□□□□ -0.72
LMO3-208ENST00000441439 ATP10AO60312 1499 aa10.55□□□□□ -0.72
LMO3-208ENST00000441439 RNF17Q9BXT8 1623 aaKnown RBP10.54□□□□□ -0.72
LMO3-208ENST00000441439 PZPP20742 1482 aa10.54□□□□□ -0.72
LMO3-208ENST00000441439 TTC37Q6PGP7 1564 aa10.54□□□□□ -0.72
LMO3-208ENST00000441439 INO80Q9ULG1 1556 aaPredicted RBP10.53□□□□□ -0.72
LMO3-208ENST00000441439 BRD4O60885 1362 aaPredicted RBP10.53□□□□□ -0.72
LMO3-208ENST00000441439 RALGAPBQ86X10 1494 aa10.53□□□□□ -0.72
LMO3-208ENST00000441439 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
LMO3-208ENST00000441439 IFT172Q9UG01 1749 aa10.53□□□□□ -0.72
LMO3-208ENST00000441439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.52□□□□□ -0.72
LMO3-208ENST00000441439 FAM9BQ8IZU0 186 aa10.52□□□□□ -0.73
LMO3-208ENST00000441439 L3MBTL2Q969R5 705 aa10.52□□□□□ -0.73
LMO3-208ENST00000441439 CARMIL2Q6F5E8 1435 aa10.52□□□□□ -0.73
LMO3-208ENST00000441439 PLEKHH2Q8IVE3 1493 aa10.52□□□□□ -0.73
LMO3-208ENST00000441439 PNISRQ8TF01 805 aaKnown RBP10.51□□□□□ -0.73
LMO3-208ENST00000441439 MPHOSPH9Q99550 1183 aa10.51□□□□□ -0.73
LMO3-208ENST00000441439 KIAA1210Q9ULL0 1709 aa10.51□□□□□ -0.73
LMO3-208ENST00000441439 PDE3BQ13370 1112 aa10.5□□□□□ -0.73
LMO3-208ENST00000441439 KIAA1107Q9UPP5 1409 aa10.5□□□□□ -0.73
LMO3-208ENST00000441439 PDE4AP27815 886 aa10.5□□□□□ -0.73
LMO3-208ENST00000441439 ABCC1P33527 1531 aa10.5□□□□□ -0.73
LMO3-208ENST00000441439 RRP1P56182 461 aaKnown RBP10.49□□□□□ -0.73
LMO3-208ENST00000441439 PLB1Q6P1J6 1458 aa10.49□□□□□ -0.73
LMO3-208ENST00000441439 CEP152O94986 1710 aa10.49□□□□□ -0.73
LMO3-208ENST00000441439 NBPF8Q3BBV2 869 aa10.49□□□□□ -0.73
LMO3-208ENST00000441439 NEFMP07197 916 aa10.48□□□□□ -0.73
LMO3-208ENST00000441439 GSE1Q14687 1217 aa10.48□□□□□ -0.73
LMO3-208ENST00000441439 KIF15Q9NS87 1388 aa10.48□□□□□ -0.73
LMO3-208ENST00000441439 CFAP74Q9C0B2 1584 aa10.47□□□□□ -0.73
LMO3-208ENST00000441439 BLMP54132 1417 aaPredicted RBP10.47□□□□□ -0.73
LMO3-208ENST00000441439 TRPM1Q7Z4N2 1603 aa10.46□□□□□ -0.73
LMO3-208ENST00000441439 FAM43AQ8N2R8 423 aa10.46□□□□□ -0.74
LMO3-208ENST00000441439 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.74
LMO3-208ENST00000441439 ERCC6L2Q5T890 1561 aa10.46□□□□□ -0.74
LMO3-208ENST00000441439 MROH1Q8NDA8 1641 aa10.45□□□□□ -0.74
LMO3-208ENST00000441439 USP47Q96K76 1375 aa10.44□□□□□ -0.74
LMO3-208ENST00000441439 RALBP1Q15311 655 aa10.44□□□□□ -0.74
LMO3-208ENST00000441439 PRDM15P57071 1507 aaPredicted RBP10.44□□□□□ -0.74
LMO3-208ENST00000441439 SPHKAPQ2M3C7 1700 aa10.43□□□□□ -0.74
LMO3-208ENST00000441439 MYBBP1AQ9BQG0 1328 aaKnown RBP10.43□□□□□ -0.74
LMO3-208ENST00000441439 PARD3Q8TEW0 1356 aa10.43□□□□□ -0.74
LMO3-208ENST00000441439 LMTK2Q8IWU2 1503 aa10.42□□□□□ -0.74
LMO3-208ENST00000441439 CCDC144AA2RUR9 1427 aa10.41□□□□□ -0.74
LMO3-208ENST00000441439 KDM2BQ8NHM5 1336 aa10.41□□□□□ -0.74
LMO3-208ENST00000441439 TET3O43151 1660 aa10.41□□□□□ -0.74
LMO3-208ENST00000441439 IQGAP1P46940 1657 aa10.41□□□□□ -0.74
LMO3-208ENST00000441439 RTEL1-TNFRSF6BF6WH68 1400 aa10.4□□□□□ -0.74
LMO3-208ENST00000441439 ZFYVE16Q7Z3T8 1539 aa10.4□□□□□ -0.74
LMO3-208ENST00000441439 RCAN3Q9UKA8 241 aa10.4□□□□□ -0.74
LMO3-208ENST00000441439 MYO3AQ8NEV4 1616 aa10.4□□□□□ -0.74
LMO3-208ENST00000441439 DUOX2Q9NRD8 1548 aa10.4□□□□□ -0.74
LMO3-208ENST00000441439 NFKBIBQ15653 356 aa10.4□□□□□ -0.74
LMO3-208ENST00000441439 PRG4Q92954 1404 aaPredicted RBP10.4□□□□□ -0.74
LMO3-208ENST00000441439 CCDC141Q6ZP82 1450 aa10.39□□□□□ -0.75
LMO3-208ENST00000441439 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
LMO3-208ENST00000441439 GLI2P10070 1586 aa10.39□□□□□ -0.75
LMO3-208ENST00000441439 ERBINQ96RT1 1412 aa10.39□□□□□ -0.75
LMO3-208ENST00000441439 EXOC6Q8TAG9 804 aa10.39□□□□□ -0.75
LMO3-208ENST00000441439 MAP3K4Q9Y6R4 1608 aa10.38□□□□□ -0.75
LMO3-208ENST00000441439 RRP7BPQ9NSQ0 103 aa10.37□□□□□ -0.75
LMO3-208ENST00000441439 BRPF3Q9ULD4 1205 aa10.37□□□□□ -0.75
LMO3-208ENST00000441439 ZC3H13Q5T200 1668 aaKnown RBP10.37□□□□□ -0.75
LMO3-208ENST00000441439 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
LMO3-208ENST00000441439 FAM135AQ9P2D6 1515 aa10.36□□□□□ -0.75
LMO3-208ENST00000441439 REREQ9P2R6 1566 aa10.36□□□□□ -0.75
LMO3-208ENST00000441439 LAS1LQ9Y4W2 734 aaKnown RBP10.36□□□□□ -0.75
LMO3-208ENST00000441439 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
LMO3-208ENST00000441439 PIK3C2BO00750 1634 aa10.34□□□□□ -0.75
LMO3-208ENST00000441439 KIDINS220Q9ULH0 1771 aa10.34□□□□□ -0.75
LMO3-208ENST00000441439 PLCH2O75038 1416 aa10.34□□□□□ -0.75
LMO3-208ENST00000441439 TMC1Q8TDI8 760 aa10.34□□□□□ -0.75
LMO3-208ENST00000441439 TRPM2O94759 1503 aa10.34□□□□□ -0.75
LMO3-208ENST00000441439 CENPQQ7L2Z9 268 aaPredicted RBP10.33□□□□□ -0.76
LMO3-208ENST00000441439 GPRASP1Q5JY77 1395 aa10.33□□□□□ -0.76
LMO3-208ENST00000441439 NLRP13Q86W25 1043 aa10.33□□□□□ -0.76
LMO3-208ENST00000441439 RTN4Q9NQC3 1192 aaKnown RBP10.33□□□□□ -0.76
LMO3-208ENST00000441439 MADDQ8WXG6 1647 aa10.33□□□□□ -0.76
LMO3-208ENST00000441439 COL17A1Q9UMD9 1497 aaPredicted RBP10.33□□□□□ -0.76
LMO3-208ENST00000441439 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
LMO3-208ENST00000441439 SYCP2Q9BX26 1530 aa10.32□□□□□ -0.76
LMO3-208ENST00000441439 RICTORQ6R327 1708 aa10.32□□□□□ -0.76
LMO3-208ENST00000441439 C9orf84Q5VXU9 1444 aa10.32□□□□□ -0.76
LMO3-208ENST00000441439 EIF3AQ14152 1382 aaKnown RBP10.32□□□□□ -0.76
LMO3-208ENST00000441439 FAM161AQ3B820 660 aa10.32□□□□□ -0.76
LMO3-208ENST00000441439 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
LMO3-208ENST00000441439 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.32□□□□□ -0.76
LMO3-208ENST00000441439 C8orf34Q49A92 452 aa10.32□□□□□ -0.76
LMO3-208ENST00000441439 PTPRTO14522 1441 aa10.31□□□□□ -0.76
LMO3-208ENST00000441439 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
LMO3-208ENST00000441439 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
LMO3-208ENST00000441439 NPM2Q86SE8 214 aaKnown RBP10.3□□□□□ -0.76
LMO3-208ENST00000441439 PPRC1Q5VV67 1664 aaKnown RBP10.3□□□□□ -0.76
LMO3-208ENST00000441439 NLRP1Q9C000 1473 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms