RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 ARID4BQ4LE39 1312 aaPredicted RBP22.28■■□□□ 1.16
PLOD3-205ENST00000440925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.16
PLOD3-205ENST00000440925 EIF2AK4Q9P2K8 1649 aaKnown RBP22.24■■□□□ 1.15
PLOD3-205ENST00000440925 VWDEQ8N2E2 1590 aa22.22■■□□□ 1.15
PLOD3-205ENST00000440925 RNF17Q9BXT8 1623 aaKnown RBP22.22■■□□□ 1.15
PLOD3-205ENST00000440925 NUP155O75694 1391 aa22.22■■□□□ 1.15
PLOD3-205ENST00000440925 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
PLOD3-205ENST00000440925 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
PLOD3-205ENST00000440925 KDM4FA0A1W2PPD8 638 aa22.19■■□□□ 1.14
PLOD3-205ENST00000440925 PZPP20742 1482 aa22.19■■□□□ 1.14
PLOD3-205ENST00000440925 UNC13BO14795 1591 aa22.19■■□□□ 1.14
PLOD3-205ENST00000440925 PPP6R1Q9UPN7 881 aa22.18■■□□□ 1.14
PLOD3-205ENST00000440925 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
PLOD3-205ENST00000440925 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
PLOD3-205ENST00000440925 WASHC2CQ9Y4E1 1318 aa22.16■■□□□ 1.14
PLOD3-205ENST00000440925 KDM5DQ9BY66 1539 aa22.16■■□□□ 1.14
PLOD3-205ENST00000440925 ADAMTSL3P82987 1691 aa22.14■■□□□ 1.13
PLOD3-205ENST00000440925 ABCC3O15438 1527 aa22.13■■□□□ 1.13
PLOD3-205ENST00000440925 FOXD1Q16676 465 aa22.12■■□□□ 1.13
PLOD3-205ENST00000440925 LMTK2Q8IWU2 1503 aa22.11■■□□□ 1.13
PLOD3-205ENST00000440925 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
PLOD3-205ENST00000440925 IQGAP3Q86VI3 1631 aa22.1■■□□□ 1.13
PLOD3-205ENST00000440925 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
PLOD3-205ENST00000440925 ZMYM3Q14202 1370 aa22.1■■□□□ 1.13
PLOD3-205ENST00000440925 PKD2Q13563 968 aa22.09■■□□□ 1.13
PLOD3-205ENST00000440925 FBXO31Q5XUX0 539 aaPredicted RBP22.09■■□□□ 1.13
PLOD3-205ENST00000440925 SLC4A1APQ9BWU0 796 aaKnown RBP22.09■■□□□ 1.13
PLOD3-205ENST00000440925 KANK1Q14678 1352 aa22.09■■□□□ 1.13
PLOD3-205ENST00000440925 DHX57Q6P158 1386 aaKnown RBP22.08■■□□□ 1.12
PLOD3-205ENST00000440925 CEP152O94986 1710 aa22.07■■□□□ 1.12
PLOD3-205ENST00000440925 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
PLOD3-205ENST00000440925 CLTCQ00610 1675 aaKnown RBP22.06■■□□□ 1.12
PLOD3-205ENST00000440925 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
PLOD3-205ENST00000440925 PLA2R1Q13018 1463 aa22.04■■□□□ 1.12
PLOD3-205ENST00000440925 NPATQ14207 1427 aa22.04■■□□□ 1.12
PLOD3-205ENST00000440925 ARHGAP31Q2M1Z3 1444 aa22.04■■□□□ 1.12
PLOD3-205ENST00000440925 CNTLNQ9NXG0 1405 aa22.01■■□□□ 1.11
PLOD3-205ENST00000440925 TET3O43151 1660 aa22.01■■□□□ 1.11
PLOD3-205ENST00000440925 E9PCH4 1651 aa22■■□□□ 1.11
PLOD3-205ENST00000440925 EFCAB6Q5THR3 1501 aa22■■□□□ 1.11
PLOD3-205ENST00000440925 CAMSAP1Q5T5Y3 1602 aa21.99■■□□□ 1.11
PLOD3-205ENST00000440925 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
PLOD3-205ENST00000440925 FER1L4A9Z1Z3 1794 aa21.99■■□□□ 1.11
PLOD3-205ENST00000440925 ANKRD30BQ9BXX2 1392 aa21.98■■□□□ 1.11
PLOD3-205ENST00000440925 ZC3H13Q5T200 1668 aaKnown RBP21.98■■□□□ 1.11
PLOD3-205ENST00000440925 RIMS1Q86UR5 1692 aaKnown RBP21.98■■□□□ 1.11
PLOD3-205ENST00000440925 PTPRTO14522 1441 aa21.97■■□□□ 1.11
PLOD3-205ENST00000440925 PTPRMP28827 1452 aa21.97■■□□□ 1.11
PLOD3-205ENST00000440925 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
PLOD3-205ENST00000440925 NOS1P29475 1434 aa21.96■■□□□ 1.11
PLOD3-205ENST00000440925 MROH2AA6NES4 1674 aa21.95■■□□□ 1.1
PLOD3-205ENST00000440925 C3P01024 1663 aa21.95■■□□□ 1.1
PLOD3-205ENST00000440925 CFAP65Q6ZU64 1925 aaKnown RBP21.94■■□□□ 1.1
PLOD3-205ENST00000440925 RPRD2Q5VT52 1461 aaKnown RBP21.92■■□□□ 1.1
PLOD3-205ENST00000440925 SIN3AQ96ST3 1273 aa21.92■■□□□ 1.1
PLOD3-205ENST00000440925 ERVK-7P63135 1459 aa21.91■■□□□ 1.1
PLOD3-205ENST00000440925 IDI1Q13907 227 aa21.91■■□□□ 1.1
PLOD3-205ENST00000440925 SPATA31D1Q6ZQQ2 1576 aa21.89■■□□□ 1.09
PLOD3-205ENST00000440925 SYNMO15061 1565 aa21.88■■□□□ 1.09
PLOD3-205ENST00000440925 PREX1Q8TCU6 1659 aa21.87■■□□□ 1.09
PLOD3-205ENST00000440925 UGGT1Q9NYU2 1555 aa21.87■■□□□ 1.09
PLOD3-205ENST00000440925 TNRQ92752 1358 aa21.85■■□□□ 1.09
PLOD3-205ENST00000440925 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
PLOD3-205ENST00000440925 TRPM2O94759 1503 aa21.81■■□□□ 1.08
PLOD3-205ENST00000440925 SLC52A1Q9NWF4 448 aa21.81■■□□□ 1.08
PLOD3-205ENST00000440925 SPHKAPQ2M3C7 1700 aa21.8■■□□□ 1.08
PLOD3-205ENST00000440925 CLTCL1P53675 1640 aa21.8■■□□□ 1.08
PLOD3-205ENST00000440925 PIK3C2BO00750 1634 aa21.79■■□□□ 1.08
PLOD3-205ENST00000440925 NEUROD1Q13562 356 aa21.77■■□□□ 1.08
PLOD3-205ENST00000440925 SPATA31E1Q6ZUB1 1445 aa21.75■■□□□ 1.07
PLOD3-205ENST00000440925 CLSPNQ9HAW4 1339 aa21.74■■□□□ 1.07
PLOD3-205ENST00000440925 CCDC144AA2RUR9 1427 aa21.73■■□□□ 1.07
PLOD3-205ENST00000440925 SETD1BQ9UPS6 1966 aaKnown RBP21.73■■□□□ 1.07
PLOD3-205ENST00000440925 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
PLOD3-205ENST00000440925 NLRP1Q9C000 1473 aa21.71■■□□□ 1.07
PLOD3-205ENST00000440925 TMEM131LA2VDJ0 1609 aa21.7■■□□□ 1.06
PLOD3-205ENST00000440925 RGL3Q3MIN7 710 aa21.7■■□□□ 1.06
PLOD3-205ENST00000440925 CHGAP10645 457 aaKnown RBP21.69■■□□□ 1.06
PLOD3-205ENST00000440925 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
PLOD3-205ENST00000440925 L3MBTL2Q969R5 705 aa21.68■■□□□ 1.06
PLOD3-205ENST00000440925 MYO3AQ8NEV4 1616 aa21.68■■□□□ 1.06
PLOD3-205ENST00000440925 LTKP29376 864 aa21.65■■□□□ 1.06
PLOD3-205ENST00000440925 UBR1Q8IWV7 1749 aa21.65■■□□□ 1.06
PLOD3-205ENST00000440925 ADGRB3O60242 1522 aa21.65■■□□□ 1.06
PLOD3-205ENST00000440925 CEP170BQ9Y4F5 1589 aaPredicted RBP21.64■■□□□ 1.05
PLOD3-205ENST00000440925 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
PLOD3-205ENST00000440925 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
PLOD3-205ENST00000440925 HSPA2P54652 639 aa21.63■■□□□ 1.05
PLOD3-205ENST00000440925 NUTM2DQ5VT03 806 aaPredicted RBP21.63■■□□□ 1.05
PLOD3-205ENST00000440925 THEMISQ8N1K5 641 aaPredicted RBP21.63■■□□□ 1.05
PLOD3-205ENST00000440925 LMTK3Q96Q04 1460 aa21.63■■□□□ 1.05
PLOD3-205ENST00000440925 NEURL4Q96JN8 1562 aa21.61■■□□□ 1.05
PLOD3-205ENST00000440925 STAG3Q9UJ98 1225 aa21.61■■□□□ 1.05
PLOD3-205ENST00000440925 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
PLOD3-205ENST00000440925 ARHGAP23Q9P227 1491 aa21.6■■□□□ 1.05
PLOD3-205ENST00000440925 ZFYVE9O95405 1425 aa21.6■■□□□ 1.05
PLOD3-205ENST00000440925 ZNF142P52746 1687 aaPredicted RBP21.6■■□□□ 1.05
PLOD3-205ENST00000440925 KIF1BO60333 1816 aa21.59■■□□□ 1.05
PLOD3-205ENST00000440925 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
PLOD3-205ENST00000440925 DCAF11Q8TEB1 546 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms