RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 TCOF1Q13428 1488 aaKnown RBP32.19■■■□□ 2.74
VIL1-204ENST00000440053 DAPK1P53355 1430 aa32.17■■■□□ 2.74
VIL1-204ENST00000440053 STRCQ7RTU9 1775 aa32.16■■■□□ 2.74
VIL1-204ENST00000440053 FAM50AQ14320 339 aaKnown RBP32.15■■■□□ 2.74
VIL1-204ENST00000440053 KDM5DQ9BY66 1539 aa32.12■■■□□ 2.73
VIL1-204ENST00000440053 KIF15Q9NS87 1388 aa32.12■■■□□ 2.73
VIL1-204ENST00000440053 DMRT2Q9Y5R5 561 aa32.1■■■□□ 2.73
VIL1-204ENST00000440053 DNMT1P26358 1616 aaKnown RBP32.09■■■□□ 2.73
VIL1-204ENST00000440053 SHANK2Q9UPX8 1470 aa32.09■■■□□ 2.73
VIL1-204ENST00000440053 DUOX2Q9NRD8 1548 aa32.09■■■□□ 2.73
VIL1-204ENST00000440053 CROCC2H7BZ55 1655 aa32.08■■■□□ 2.73
VIL1-204ENST00000440053 NCKAP5LQ9HCH0 1330 aa32.07■■■□□ 2.72
VIL1-204ENST00000440053 CAMSAP1Q5T5Y3 1602 aa32.05■■■□□ 2.72
VIL1-204ENST00000440053 NCOA1Q15788 1441 aa32.05■■■□□ 2.72
VIL1-204ENST00000440053 PZPP20742 1482 aa32.05■■■□□ 2.72
VIL1-204ENST00000440053 MYO3AQ8NEV4 1616 aa32.05■■■□□ 2.72
VIL1-204ENST00000440053 RNF17Q9BXT8 1623 aaKnown RBP32.05■■■□□ 2.72
VIL1-204ENST00000440053 TNRQ92752 1358 aa32.04■■■□□ 2.72
VIL1-204ENST00000440053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.03■■■□□ 2.721e-10■□□□□ 10.8
VIL1-204ENST00000440053 EIF2AK4Q9P2K8 1649 aaKnown RBP32.02■■■□□ 2.72
VIL1-204ENST00000440053 FAM135AQ9P2D6 1515 aa32.02■■■□□ 2.72
VIL1-204ENST00000440053 MROH1Q8NDA8 1641 aa32.01■■■□□ 2.72
VIL1-204ENST00000440053 FBXO41Q8TF61 875 aa32.01■■■□□ 2.71
VIL1-204ENST00000440053 ABCC3O15438 1527 aa32.01■■■□□ 2.71
VIL1-204ENST00000440053 CEP170BQ9Y4F5 1589 aaPredicted RBP32.01■■■□□ 2.71
VIL1-204ENST00000440053 ANKRD30AQ9BXX3 1397 aa32.01■■■□□ 2.71
VIL1-204ENST00000440053 CERKQ8TCT0 537 aa31.99■■■□□ 2.71
VIL1-204ENST00000440053 PTPRTO14522 1441 aa31.98■■■□□ 2.71
VIL1-204ENST00000440053 ERBINQ96RT1 1412 aa31.97■■■□□ 2.71
VIL1-204ENST00000440053 A2ML1A8K2U0 1454 aa31.97■■■□□ 2.71
VIL1-204ENST00000440053 ZNF142P52746 1687 aaPredicted RBP31.95■■■□□ 2.71
VIL1-204ENST00000440053 CEP152O94986 1710 aa31.9■■■□□ 2.7
VIL1-204ENST00000440053 PKD2Q13563 968 aa31.9■■■□□ 2.7
VIL1-204ENST00000440053 ADGRL2O95490 1459 aa31.88■■■□□ 2.69
VIL1-204ENST00000440053 ZC3H13Q5T200 1668 aaKnown RBP31.88■■■□□ 2.69
VIL1-204ENST00000440053 PLA2R1Q13018 1463 aa31.88■■■□□ 2.69
VIL1-204ENST00000440053 ITGAEP38570 1179 aa31.86■■■□□ 2.69
VIL1-204ENST00000440053 PRDM15P57071 1507 aaPredicted RBP31.86■■■□□ 2.69
VIL1-204ENST00000440053 ERVK-7P63135 1459 aa31.85■■■□□ 2.69
VIL1-204ENST00000440053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.85■■■□□ 2.69
VIL1-204ENST00000440053 THEMISQ8N1K5 641 aaPredicted RBP31.83■■■□□ 2.69
VIL1-204ENST00000440053 CFAP65Q6ZU64 1925 aaKnown RBP31.83■■■□□ 2.69
VIL1-204ENST00000440053 SPATA31D1Q6ZQQ2 1576 aa31.83■■■□□ 2.69
VIL1-204ENST00000440053 NLRP1Q9C000 1473 aa31.82■■■□□ 2.68
VIL1-204ENST00000440053 KANK1Q14678 1352 aa31.82■■■□□ 2.68
VIL1-204ENST00000440053 DEPDC5O75140 1603 aa31.8■■■□□ 2.68
VIL1-204ENST00000440053 ANKRD50Q9ULJ7 1429 aa31.8■■■□□ 2.68
VIL1-204ENST00000440053 ZNF335Q9H4Z2 1342 aaPredicted RBP31.79■■■□□ 2.68
VIL1-204ENST00000440053 UGGT1Q9NYU2 1555 aa31.78■■■□□ 2.68
VIL1-204ENST00000440053 ARHGAP31Q2M1Z3 1444 aa31.78■■■□□ 2.68
VIL1-204ENST00000440053 ANKLE2Q86XL3 938 aa31.77■■■□□ 2.68
VIL1-204ENST00000440053 LTBP4Q8N2S1 1624 aa31.75■■■□□ 2.67
VIL1-204ENST00000440053 VWDEQ8N2E2 1590 aa31.73■■■□□ 2.67
VIL1-204ENST00000440053 LMTK2Q8IWU2 1503 aa31.7■■■□□ 2.66
VIL1-204ENST00000440053 ROCK1Q13464 1354 aa31.68■■■□□ 2.66
VIL1-204ENST00000440053 NEURL4Q96JN8 1562 aa31.68■■■□□ 2.66
VIL1-204ENST00000440053 IDI1Q13907 227 aa31.65■■■□□ 2.66
VIL1-204ENST00000440053 POLR1AO95602 1720 aaPredicted RBP31.63■■■□□ 2.65
VIL1-204ENST00000440053 NPHP4O75161 1426 aaPredicted RBP31.61■■■□□ 2.65
VIL1-204ENST00000440053 LTKP29376 864 aa31.6■■■□□ 2.65
VIL1-204ENST00000440053 UBR1Q8IWV7 1749 aa31.59■■■□□ 2.65
VIL1-204ENST00000440053 RRBP1Q9P2E9 1410 aaKnown RBP31.59■■■□□ 2.65
VIL1-204ENST00000440053 EFCAB6Q5THR3 1501 aa31.59■■■□□ 2.65
VIL1-204ENST00000440053 STAG3Q9UJ98 1225 aa31.59■■■□□ 2.65
VIL1-204ENST00000440053 MED14O60244 1454 aa31.58■■■□□ 2.65
VIL1-204ENST00000440053 NOS1P29475 1434 aa31.57■■■□□ 2.64
VIL1-204ENST00000440053 TXNDC2Q86VQ3 553 aa31.57■■■□□ 2.64
VIL1-204ENST00000440053 SYNMO15061 1565 aa31.55■■■□□ 2.64
VIL1-204ENST00000440053 PIK3C2BO00750 1634 aa31.55■■■□□ 2.64
VIL1-204ENST00000440053 UNC13BO14795 1591 aa31.52■■■□□ 2.64
VIL1-204ENST00000440053 NUP155O75694 1391 aa31.52■■■□□ 2.64
VIL1-204ENST00000440053 ARHGAP23Q9P227 1491 aa31.5■■■□□ 2.63
VIL1-204ENST00000440053 TMEM2Q9UHN6 1383 aa31.48■■■□□ 2.63
VIL1-204ENST00000440053 SLC52A1Q9NWF4 448 aa31.48■■■□□ 2.63
VIL1-204ENST00000440053 EID1Q9Y6B2 187 aa31.48■■■□□ 2.63
VIL1-204ENST00000440053 SLIT1O75093 1534 aa31.48■■■□□ 2.63
VIL1-204ENST00000440053 SCAF11Q99590 1463 aaKnown RBP31.48■■■□□ 2.63
VIL1-204ENST00000440053 IQSEC2Q5JU85 1478 aa31.47■■■□□ 2.63
VIL1-204ENST00000440053 TET3O43151 1660 aa31.47■■■□□ 2.63
VIL1-204ENST00000440053 IQGAP1P46940 1657 aa31.46■■■□□ 2.63
VIL1-204ENST00000440053 RPRD2Q5VT52 1461 aaKnown RBP31.46■■■□□ 2.63
VIL1-204ENST00000440053 UBAP1LF5GYI3 381 aa31.45■■■□□ 2.62
VIL1-204ENST00000440053 SENP3Q9H4L4 574 aaPredicted RBP31.4■■■□□ 2.62
VIL1-204ENST00000440053 IQGAP3Q86VI3 1631 aa31.4■■■□□ 2.62
VIL1-204ENST00000440053 GCC2Q8IWJ2 1684 aa31.4■■■□□ 2.62
VIL1-204ENST00000440053 E9PCH4 1651 aa31.39■■■□□ 2.62
VIL1-204ENST00000440053 NAIPQ13075 1403 aa31.39■■■□□ 2.61
VIL1-204ENST00000440053 CHGAP10645 457 aaKnown RBP31.38■■■□□ 2.61
VIL1-204ENST00000440053 CPS1P31327 1500 aa31.37■■■□□ 2.61
VIL1-204ENST00000440053 ADGRB3O60242 1522 aa31.37■■■□□ 2.61
VIL1-204ENST00000440053 SLC26A8Q96RN1 970 aa31.34■■■□□ 2.61
VIL1-204ENST00000440053 KDM5AP29375 1690 aaKnown RBP31.34■■■□□ 2.61
VIL1-204ENST00000440053 STRCP1A6NGW2 1772 aa31.33■■■□□ 2.61
VIL1-204ENST00000440053 NUTM2DQ5VT03 806 aaPredicted RBP31.29■■■□□ 2.6
VIL1-204ENST00000440053 BCANQ96GW7 911 aa31.29■■■□□ 2.6
VIL1-204ENST00000440053 PIP4K2BP78356 416 aa31.27■■■□□ 2.6
VIL1-204ENST00000440053 TRIM52Q96A61 297 aa31.27■■■□□ 2.6
VIL1-204ENST00000440053 TMEM131LA2VDJ0 1609 aa31.27■■■□□ 2.6
VIL1-204ENST00000440053 LRRC7Q96NW7 1537 aa31.26■■■□□ 2.6
VIL1-204ENST00000440053 MYO5BQ9ULV0 1848 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms