RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FAM135AQ9P2D6 1515 aa18.02■□□□□ 0.47
HSPG2-206ENST00000439717 ROCK1Q13464 1354 aa18.02■□□□□ 0.47
HSPG2-206ENST00000439717 RNF17Q9BXT8 1623 aaKnown RBP18■□□□□ 0.47
HSPG2-206ENST00000439717 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
HSPG2-206ENST00000439717 CLTCQ00610 1675 aaKnown RBP17.97■□□□□ 0.47
HSPG2-206ENST00000439717 ZMYM3Q14202 1370 aa17.97■□□□□ 0.47
HSPG2-206ENST00000439717 ITGAEP38570 1179 aa17.97■□□□□ 0.47
HSPG2-206ENST00000439717 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
HSPG2-206ENST00000439717 KDM5DQ9BY66 1539 aa17.97■□□□□ 0.47
HSPG2-206ENST00000439717 WASHC2CQ9Y4E1 1318 aa17.97■□□□□ 0.47
HSPG2-206ENST00000439717 CEBPAP49715 358 aaPredicted RBP17.96■□□□□ 0.47
HSPG2-206ENST00000439717 C3P01024 1663 aa17.96■□□□□ 0.47
HSPG2-206ENST00000439717 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
HSPG2-206ENST00000439717 MROH1Q8NDA8 1641 aa17.93■□□□□ 0.46
HSPG2-206ENST00000439717 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
HSPG2-206ENST00000439717 NPATQ14207 1427 aa17.92■□□□□ 0.46
HSPG2-206ENST00000439717 DEPDC5O75140 1603 aa17.92■□□□□ 0.46
HSPG2-206ENST00000439717 ZC3H13Q5T200 1668 aaKnown RBP17.92■□□□□ 0.46
HSPG2-206ENST00000439717 ABCC3O15438 1527 aa17.91■□□□□ 0.46
HSPG2-206ENST00000439717 KANK1Q14678 1352 aa17.9■□□□□ 0.46
HSPG2-206ENST00000439717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
HSPG2-206ENST00000439717 PZPP20742 1482 aa17.88■□□□□ 0.45
HSPG2-206ENST00000439717 SETD1BQ9UPS6 1966 aaKnown RBP17.87■□□□□ 0.45
HSPG2-206ENST00000439717 LMTK3Q96Q04 1460 aa17.87■□□□□ 0.45
HSPG2-206ENST00000439717 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
HSPG2-206ENST00000439717 UHRF1BP1Q6BDS2 1440 aa17.86■□□□□ 0.45
HSPG2-206ENST00000439717 VWDEQ8N2E2 1590 aa17.86■□□□□ 0.45
HSPG2-206ENST00000439717 LMTK2Q8IWU2 1503 aa17.85■□□□□ 0.45
HSPG2-206ENST00000439717 CEP152O94986 1710 aa17.84■□□□□ 0.45
HSPG2-206ENST00000439717 ARHGAP31Q2M1Z3 1444 aa17.83■□□□□ 0.45
HSPG2-206ENST00000439717 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.44
HSPG2-206ENST00000439717 UNC13BO14795 1591 aa17.83■□□□□ 0.44
HSPG2-206ENST00000439717 HFM1A2PYH4 1435 aa17.82■□□□□ 0.44
HSPG2-206ENST00000439717 NAIPQ13075 1403 aa17.82■□□□□ 0.44
HSPG2-206ENST00000439717 FBXO31Q5XUX0 539 aaPredicted RBP17.81■□□□□ 0.44
HSPG2-206ENST00000439717 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
HSPG2-206ENST00000439717 TNRQ92752 1358 aa17.8■□□□□ 0.44
HSPG2-206ENST00000439717 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
HSPG2-206ENST00000439717 ERVK-7P63135 1459 aa17.77■□□□□ 0.44
HSPG2-206ENST00000439717 MYO3AQ8NEV4 1616 aa17.77■□□□□ 0.44
HSPG2-206ENST00000439717 NUP155O75694 1391 aa17.77■□□□□ 0.43
HSPG2-206ENST00000439717 EFCAB6Q5THR3 1501 aa17.77■□□□□ 0.43
HSPG2-206ENST00000439717 HSPA2P54652 639 aa17.76■□□□□ 0.43
HSPG2-206ENST00000439717 IQGAP3Q86VI3 1631 aa17.76■□□□□ 0.43
HSPG2-206ENST00000439717 NLRP1Q9C000 1473 aa17.75■□□□□ 0.43
HSPG2-206ENST00000439717 TET3O43151 1660 aa17.75■□□□□ 0.43
HSPG2-206ENST00000439717 RPRD2Q5VT52 1461 aaKnown RBP17.75■□□□□ 0.43
HSPG2-206ENST00000439717 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
HSPG2-206ENST00000439717 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
HSPG2-206ENST00000439717 A2ML1A8K2U0 1454 aa17.74■□□□□ 0.43
HSPG2-206ENST00000439717 ACIN1Q9UKV3 1341 aaKnown RBP17.71■□□□□ 0.42
HSPG2-206ENST00000439717 NOS1P29475 1434 aa17.7■□□□□ 0.42
HSPG2-206ENST00000439717 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
HSPG2-206ENST00000439717 CFAP65Q6ZU64 1925 aaKnown RBP17.67■□□□□ 0.42
HSPG2-206ENST00000439717 THEMISQ8N1K5 641 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-206ENST00000439717 PLA2R1Q13018 1463 aa17.67■□□□□ 0.42
HSPG2-206ENST00000439717 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
HSPG2-206ENST00000439717 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
HSPG2-206ENST00000439717 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
HSPG2-206ENST00000439717 E9PCH4 1651 aa17.66■□□□□ 0.42
HSPG2-206ENST00000439717 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
HSPG2-206ENST00000439717 SYNMO15061 1565 aa17.65■□□□□ 0.42
HSPG2-206ENST00000439717 STRCQ7RTU9 1775 aa17.63■□□□□ 0.41
HSPG2-206ENST00000439717 PKD2Q13563 968 aa17.63■□□□□ 0.41
HSPG2-206ENST00000439717 IDI1Q13907 227 aa17.63■□□□□ 0.41
HSPG2-206ENST00000439717 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
HSPG2-206ENST00000439717 KDM5AP29375 1690 aaKnown RBP17.61■□□□□ 0.41
HSPG2-206ENST00000439717 UBR1Q8IWV7 1749 aa17.61■□□□□ 0.41
HSPG2-206ENST00000439717 RAB3GAP2Q9H2M9 1393 aa17.6■□□□□ 0.41
HSPG2-206ENST00000439717 PTPRTO14522 1441 aa17.6■□□□□ 0.41
HSPG2-206ENST00000439717 PIK3C2BO00750 1634 aa17.6■□□□□ 0.41
HSPG2-206ENST00000439717 HRCP23327 699 aa17.59■□□□□ 0.41
HSPG2-206ENST00000439717 STAG3Q9UJ98 1225 aa17.59■□□□□ 0.41
HSPG2-206ENST00000439717 NCKAP5LQ9HCH0 1330 aa17.58■□□□□ 0.4
HSPG2-206ENST00000439717 ANKLE2Q86XL3 938 aa17.58■□□□□ 0.4
HSPG2-206ENST00000439717 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
HSPG2-206ENST00000439717 SPHKAPQ2M3C7 1700 aa17.55■□□□□ 0.4
HSPG2-206ENST00000439717 MPHOSPH9Q99550 1183 aa17.55■□□□□ 0.4
HSPG2-206ENST00000439717 SLIT1O75093 1534 aa17.55■□□□□ 0.4
HSPG2-206ENST00000439717 ARHGAP23Q9P227 1491 aa17.55■□□□□ 0.4
HSPG2-206ENST00000439717 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
HSPG2-206ENST00000439717 TRPM2O94759 1503 aa17.53■□□□□ 0.4
HSPG2-206ENST00000439717 POLR1AO95602 1720 aaPredicted RBP17.53■□□□□ 0.4
HSPG2-206ENST00000439717 MED14O60244 1454 aa17.52■□□□□ 0.4
HSPG2-206ENST00000439717 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
HSPG2-206ENST00000439717 NEURL4Q96JN8 1562 aa17.52■□□□□ 0.39
HSPG2-206ENST00000439717 SCAF11Q99590 1463 aaKnown RBP17.51■□□□□ 0.39
HSPG2-206ENST00000439717 TMEM131LA2VDJ0 1609 aa17.51■□□□□ 0.39
HSPG2-206ENST00000439717 TXNDC2Q86VQ3 553 aa17.51■□□□□ 0.39
HSPG2-206ENST00000439717 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-206ENST00000439717 NPHP4O75161 1426 aaPredicted RBP17.49■□□□□ 0.39
HSPG2-206ENST00000439717 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
HSPG2-206ENST00000439717 LTKP29376 864 aa17.49■□□□□ 0.39
HSPG2-206ENST00000439717 HDGFP51858 240 aaKnown RBP17.49■□□□□ 0.39
HSPG2-206ENST00000439717 FOXD1Q16676 465 aa17.47■□□□□ 0.39
HSPG2-206ENST00000439717 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
HSPG2-206ENST00000439717 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
HSPG2-206ENST00000439717 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
HSPG2-206ENST00000439717 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
HSPG2-206ENST00000439717 RIMS2Q9UQ26 1411 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms