RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 MPHOSPH9Q99550 1183 aa34.31■■■■□ 3.08
LONRF3-204ENST00000439603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.3■■■■□ 3.08
LONRF3-204ENST00000439603 KDM5DQ9BY66 1539 aa34.29■■■■□ 3.08
LONRF3-204ENST00000439603 REREQ9P2R6 1566 aa34.28■■■■□ 3.08
LONRF3-204ENST00000439603 PZPP20742 1482 aa34.27■■■■□ 3.08
LONRF3-204ENST00000439603 SLC4A1APQ9BWU0 796 aaKnown RBP34.27■■■■□ 3.08
LONRF3-204ENST00000439603 DEPDC5O75140 1603 aa34.26■■■■□ 3.07
LONRF3-204ENST00000439603 BCORL1Q5H9F3 1711 aa34.25■■■■□ 3.07
LONRF3-204ENST00000439603 CLSPNQ9HAW4 1339 aa34.22■■■■□ 3.07
LONRF3-204ENST00000439603 RNF17Q9BXT8 1623 aaKnown RBP34.21■■■■□ 3.07
LONRF3-204ENST00000439603 FAM135AQ9P2D6 1515 aa34.2■■■■□ 3.07
LONRF3-204ENST00000439603 AGLP35573 1532 aa34.19■■■■□ 3.06
LONRF3-204ENST00000439603 IQGAP3Q86VI3 1631 aa34.18■■■■□ 3.06
LONRF3-204ENST00000439603 MROH1Q8NDA8 1641 aa34.18■■■■□ 3.06
LONRF3-204ENST00000439603 GGT6Q6P531 493 aa34.18■■■■□ 3.06
LONRF3-204ENST00000439603 KANK1Q14678 1352 aa34.18■■■■□ 3.06
LONRF3-204ENST00000439603 PRDM15P57071 1507 aaPredicted RBP34.18■■■■□ 3.06
LONRF3-204ENST00000439603 PKD2Q13563 968 aa34.14■■■■□ 3.06
LONRF3-204ENST00000439603 VWDEQ8N2E2 1590 aa34.14■■■■□ 3.05
LONRF3-204ENST00000439603 SIGLEC1Q9BZZ2 1709 aa34.12■■■■□ 3.05
LONRF3-204ENST00000439603 FOXD1Q16676 465 aa34.11■■■■□ 3.05
LONRF3-204ENST00000439603 ARID4BQ4LE39 1312 aaPredicted RBP34.05■■■■□ 3.04
LONRF3-204ENST00000439603 WASHC2CQ9Y4E1 1318 aa34.04■■■■□ 3.04
LONRF3-204ENST00000439603 LMTK2Q8IWU2 1503 aa34.02■■■■□ 3.04
LONRF3-204ENST00000439603 TET3O43151 1660 aa34.01■■■■□ 3.03
LONRF3-204ENST00000439603 PPP6R1Q9UPN7 881 aa34.01■■■■□ 3.03
LONRF3-204ENST00000439603 ANKRD30BQ9BXX2 1392 aa34.01■■■■□ 3.03
LONRF3-204ENST00000439603 ZEB1P37275 1124 aaPredicted RBP33.99■■■■□ 3.03
LONRF3-204ENST00000439603 MLECQ14165 292 aa33.99■■■■□ 3.03
LONRF3-204ENST00000439603 ABCC3O15438 1527 aa33.99■■■■□ 3.03
LONRF3-204ENST00000439603 CEP152O94986 1710 aa33.98■■■■□ 3.03
LONRF3-204ENST00000439603 SIN3AQ96ST3 1273 aa33.98■■■■□ 3.03
LONRF3-204ENST00000439603 ZC3H13Q5T200 1668 aaKnown RBP33.94■■■■□ 3.02
LONRF3-204ENST00000439603 E9PCH4 1651 aa33.93■■■■□ 3.02
LONRF3-204ENST00000439603 EFCAB6Q5THR3 1501 aa33.93■■■■□ 3.02
LONRF3-204ENST00000439603 NEUROD1Q13562 356 aa33.92■■■■□ 3.02
LONRF3-204ENST00000439603 CAMSAP1Q5T5Y3 1602 aa33.87■■■■□ 3.01
LONRF3-204ENST00000439603 RPRD2Q5VT52 1461 aaKnown RBP33.85■■■■□ 3.01
LONRF3-204ENST00000439603 NPATQ14207 1427 aa33.85■■■■□ 3.01
LONRF3-204ENST00000439603 PLA2R1Q13018 1463 aa33.85■■■■□ 3.01
LONRF3-204ENST00000439603 ESF1Q9H501 851 aaKnown RBP33.84■■■■□ 3.01
LONRF3-204ENST00000439603 ARHGAP31Q2M1Z3 1444 aa33.83■■■■□ 3.01
LONRF3-204ENST00000439603 PTPRTO14522 1441 aa33.82■■■■□ 3
LONRF3-204ENST00000439603 CLTCQ00610 1675 aaKnown RBP33.81■■■■□ 3
LONRF3-204ENST00000439603 SPHKAPQ2M3C7 1700 aa33.77■■■■□ 3
LONRF3-204ENST00000439603 CCDC144AA2RUR9 1427 aa33.76■■■■□ 3
LONRF3-204ENST00000439603 CNTLNQ9NXG0 1405 aa33.75■■■□□ 2.99
LONRF3-204ENST00000439603 TIMELESSQ9UNS1 1208 aa33.75■■■□□ 2.99
LONRF3-204ENST00000439603 TRPM2O94759 1503 aa33.75■■■□□ 2.99
LONRF3-204ENST00000439603 ZMYM3Q14202 1370 aa33.72■■■□□ 2.99
LONRF3-204ENST00000439603 TONSLQ96HA7 1378 aa33.72■■■□□ 2.99
LONRF3-204ENST00000439603 CFAP65Q6ZU64 1925 aaKnown RBP33.7■■■□□ 2.99
LONRF3-204ENST00000439603 NOS1P29475 1434 aa33.69■■■□□ 2.98
LONRF3-204ENST00000439603 FER1L4A9Z1Z3 1794 aa33.66■■■□□ 2.98
LONRF3-204ENST00000439603 FBXO31Q5XUX0 539 aaPredicted RBP33.65■■■□□ 2.98
LONRF3-204ENST00000439603 MROH2AA6NES4 1674 aa33.65■■■□□ 2.98
LONRF3-204ENST00000439603 PREX1Q8TCU6 1659 aa33.64■■■□□ 2.98
LONRF3-204ENST00000439603 CLTCL1P53675 1640 aa33.63■■■□□ 2.97
LONRF3-204ENST00000439603 ERVK-7P63135 1459 aa33.62■■■□□ 2.97
LONRF3-204ENST00000439603 UGGT1Q9NYU2 1555 aa33.6■■■□□ 2.97
LONRF3-204ENST00000439603 SYNMO15061 1565 aa33.6■■■□□ 2.97
LONRF3-204ENST00000439603 L3MBTL2Q969R5 705 aa33.59■■■□□ 2.97
LONRF3-204ENST00000439603 ADAMTSL3P82987 1691 aa33.59■■■□□ 2.97
LONRF3-204ENST00000439603 MADDQ8WXG6 1647 aa33.58■■■□□ 2.97
LONRF3-204ENST00000439603 SPATA31D1Q6ZQQ2 1576 aa33.57■■■□□ 2.97
LONRF3-204ENST00000439603 SLC52A1Q9NWF4 448 aa33.55■■■□□ 2.96
LONRF3-204ENST00000439603 PPP1R15AO75807 674 aaPredicted RBP33.53■■■□□ 2.96
LONRF3-204ENST00000439603 CEBPAP49715 358 aaPredicted RBP33.53■■■□□ 2.96
LONRF3-204ENST00000439603 SPATA31E1Q6ZUB1 1445 aa33.52■■■□□ 2.96
LONRF3-204ENST00000439603 PIK3C2BO00750 1634 aa33.52■■■□□ 2.96
LONRF3-204ENST00000439603 RGL3Q3MIN7 710 aa33.52■■■□□ 2.96
LONRF3-204ENST00000439603 IDI1Q13907 227 aa33.51■■■□□ 2.96
LONRF3-204ENST00000439603 C3P01024 1663 aa33.51■■■□□ 2.95
LONRF3-204ENST00000439603 RIMS1Q86UR5 1692 aaKnown RBP33.5■■■□□ 2.95
LONRF3-204ENST00000439603 KIF1BO60333 1816 aa33.48■■■□□ 2.95
LONRF3-204ENST00000439603 NEURL4Q96JN8 1562 aa33.47■■■□□ 2.95
LONRF3-204ENST00000439603 TNRQ92752 1358 aa33.45■■■□□ 2.95
LONRF3-204ENST00000439603 CHGAP10645 457 aaKnown RBP33.45■■■□□ 2.95
LONRF3-204ENST00000439603 PLPPR3Q6T4P5 718 aa33.44■■■□□ 2.94
LONRF3-204ENST00000439603 DCAF11Q8TEB1 546 aa33.43■■■□□ 2.94
LONRF3-204ENST00000439603 ADGRB3O60242 1522 aa33.41■■■□□ 2.94
LONRF3-204ENST00000439603 KDM2AQ9Y2K7 1162 aa33.38■■■□□ 2.93
LONRF3-204ENST00000439603 ZNF326Q5BKZ1 582 aaKnown RBP33.36■■■□□ 2.93
LONRF3-204ENST00000439603 TMEM131LA2VDJ0 1609 aa33.34■■■□□ 2.93
LONRF3-204ENST00000439603 STAG3Q9UJ98 1225 aa33.33■■■□□ 2.93
LONRF3-204ENST00000439603 PTPRMP28827 1452 aa33.32■■■□□ 2.92
LONRF3-204ENST00000439603 STAC3Q96MF2 364 aa33.32■■■□□ 2.92
LONRF3-204ENST00000439603 NLRP1Q9C000 1473 aa33.32■■■□□ 2.92
LONRF3-204ENST00000439603 NBPF8Q3BBV2 869 aa33.31■■■□□ 2.92
LONRF3-204ENST00000439603 RPGRIP1LQ68CZ1 1315 aa33.3■■■□□ 2.92
LONRF3-204ENST00000439603 UHRF1BP1Q6BDS2 1440 aa33.29■■■□□ 2.92
LONRF3-204ENST00000439603 A2ML1A8K2U0 1454 aa33.26■■■□□ 2.91
LONRF3-204ENST00000439603 MYO5BQ9ULV0 1848 aa33.25■■■□□ 2.91
LONRF3-204ENST00000439603 KDM4FA0A1W2PPD8 638 aa33.24■■■□□ 2.91
LONRF3-204ENST00000439603 PRAG1Q86YV5 1406 aa33.23■■■□□ 2.91
LONRF3-204ENST00000439603 IFT172Q9UG01 1749 aa33.23■■■□□ 2.91
LONRF3-204ENST00000439603 MYOM2P54296 1465 aa33.21■■■□□ 2.91
LONRF3-204ENST00000439603 KDM5AP29375 1690 aaKnown RBP33.21■■■□□ 2.91
LONRF3-204ENST00000439603 NEXMIFQ5QGS0 1516 aa33.2■■■□□ 2.91
LONRF3-204ENST00000439603 PPLO60437 1756 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms