RNA–Protein interactions for RNA: ENST00000439214.1

SNAP29-202, Transcript of synaptosome associated protein 29, humanhuman

TSL 3

Gene SNAP29, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-202ENST00000439214 PCDHGA4Q9Y5G9 962 aa10.19□□□□□ -0.78
SNAP29-202ENST00000439214 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
SNAP29-202ENST00000439214 RIMBP2O15034 1052 aa10.17□□□□□ -0.78
SNAP29-202ENST00000439214 PTGDRQ13258 359 aa10.17□□□□□ -0.78
SNAP29-202ENST00000439214 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
SNAP29-202ENST00000439214 FECHP22830 423 aa10.16□□□□□ -0.78
SNAP29-202ENST00000439214 EN1Q05925 392 aaPredicted RBP10.15□□□□□ -0.78
SNAP29-202ENST00000439214 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
SNAP29-202ENST00000439214 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
SNAP29-202ENST00000439214 DOK7Q18PE1 504 aa10.14□□□□□ -0.79
SNAP29-202ENST00000439214 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
SNAP29-202ENST00000439214 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
SNAP29-202ENST00000439214 ATP1B4Q9UN42 357 aaPredicted RBP10.13□□□□□ -0.79
SNAP29-202ENST00000439214 DCAF1Q9Y4B6 1507 aa10.12□□□□□ -0.79
SNAP29-202ENST00000439214 PRIM1P49642 420 aaKnown RBP10.12□□□□□ -0.79
SNAP29-202ENST00000439214 PCDHGA10Q9Y5H3 936 aa10.12□□□□□ -0.79
SNAP29-202ENST00000439214 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
SNAP29-202ENST00000439214 AMHR2Q16671 573 aa10.11□□□□□ -0.79
SNAP29-202ENST00000439214 ZNF454Q8N9F8 522 aa10.11□□□□□ -0.79
SNAP29-202ENST00000439214 FAM117AQ9C073 453 aa10.11□□□□□ -0.79
SNAP29-202ENST00000439214 CDHR5Q9HBB8 845 aa10.11□□□□□ -0.79
SNAP29-202ENST00000439214 ST18O60284 1047 aa10.1□□□□□ -0.79
SNAP29-202ENST00000439214 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
SNAP29-202ENST00000439214 TSR1Q2NL82 804 aaKnown RBP10.09□□□□□ -0.79
SNAP29-202ENST00000439214 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
SNAP29-202ENST00000439214 NUDT7P0C024 238 aa10.08□□□□□ -0.8
SNAP29-202ENST00000439214 ARSIQ5FYB1 569 aa10.08□□□□□ -0.8
SNAP29-202ENST00000439214 CERKQ8TCT0 537 aa10.08□□□□□ -0.8
SNAP29-202ENST00000439214 ZDHHC16Q969W1 377 aa10.08□□□□□ -0.8
SNAP29-202ENST00000439214 CLCN1P35523 988 aa10.06□□□□□ -0.8
SNAP29-202ENST00000439214 OATP04181 439 aa10.05□□□□□ -0.8
SNAP29-202ENST00000439214 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
SNAP29-202ENST00000439214 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
SNAP29-202ENST00000439214 NPDC1Q9NQX5 325 aaPredicted RBP10.05□□□□□ -0.8
SNAP29-202ENST00000439214 FOSBP53539 338 aa10.04□□□□□ -0.8
SNAP29-202ENST00000439214 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
SNAP29-202ENST00000439214 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNAP29-202ENST00000439214 ZSWIM6Q9HCJ5 1215 aa10.02□□□□□ -0.81
SNAP29-202ENST00000439214 SCRIBQ14160 1630 aa10.01□□□□□ -0.81
SNAP29-202ENST00000439214 SNPHO15079 494 aa10.01□□□□□ -0.81
SNAP29-202ENST00000439214 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
SNAP29-202ENST00000439214 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
SNAP29-202ENST00000439214 GPCPD1Q9NPB8 672 aa10.01□□□□□ -0.81
SNAP29-202ENST00000439214 FAM161AQ3B820 660 aa10□□□□□ -0.81
SNAP29-202ENST00000439214 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
SNAP29-202ENST00000439214 PADI6Q6TGC4 694 aa10□□□□□ -0.81
SNAP29-202ENST00000439214 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
SNAP29-202ENST00000439214 PSDA5PKW4 1024 aaPredicted RBP9.98□□□□□ -0.81
SNAP29-202ENST00000439214 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
SNAP29-202ENST00000439214 RBM46Q8TBY0 533 aaKnown RBP9.98□□□□□ -0.81
SNAP29-202ENST00000439214 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
SNAP29-202ENST00000439214 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
SNAP29-202ENST00000439214 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
SNAP29-202ENST00000439214 MS4A1P11836 297 aa9.96□□□□□ -0.82
SNAP29-202ENST00000439214 PRSS12P56730 875 aa9.96□□□□□ -0.82
SNAP29-202ENST00000439214 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
SNAP29-202ENST00000439214 LHX6Q9UPM6 363 aa9.96□□□□□ -0.82
SNAP29-202ENST00000439214 KDM4FA0A1W2PPD8 638 aa9.95□□□□□ -0.82
SNAP29-202ENST00000439214 HOXB3P14651 431 aaPredicted RBP9.95□□□□□ -0.82
SNAP29-202ENST00000439214 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
SNAP29-202ENST00000439214 METTL3Q86U44 580 aaKnown RBP9.95□□□□□ -0.82
SNAP29-202ENST00000439214 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
SNAP29-202ENST00000439214 UNC13AQ9UPW8 1703 aa9.95□□□□□ -0.82
SNAP29-202ENST00000439214 MARVELD3Q96A59 401 aa9.94□□□□□ -0.82
SNAP29-202ENST00000439214 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
SNAP29-202ENST00000439214 REPIN1Q9BWE0 567 aaKnown RBP9.94□□□□□ -0.82
SNAP29-202ENST00000439214 SHROOM4Q9ULL8 1493 aa9.93□□□□□ -0.82
SNAP29-202ENST00000439214 PTPREP23469 700 aa9.93□□□□□ -0.82
SNAP29-202ENST00000439214 NLRP7Q8WX94 980 aa9.93□□□□□ -0.82
SNAP29-202ENST00000439214 RBM27Q9P2N5 1060 aaKnown RBP9.93□□□□□ -0.82
SNAP29-202ENST00000439214 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
SNAP29-202ENST00000439214 PHOX2BQ99453 314 aa9.92□□□□□ -0.82
SNAP29-202ENST00000439214 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
SNAP29-202ENST00000439214 PXYLP1Q8TE99 480 aa9.91□□□□□ -0.82
SNAP29-202ENST00000439214 ZMYND15Q9H091 742 aa9.91□□□□□ -0.82
SNAP29-202ENST00000439214 FLIIQ13045 1269 aa9.9□□□□□ -0.82
SNAP29-202ENST00000439214 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
SNAP29-202ENST00000439214 FAM217BQ9NTX9 383 aaPredicted RBP9.89□□□□□ -0.83
SNAP29-202ENST00000439214 BCL2L12Q9HB09 334 aa9.88□□□□□ -0.83
SNAP29-202ENST00000439214 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
SNAP29-202ENST00000439214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.87□□□□□ -0.83
SNAP29-202ENST00000439214 SKIV2LQ15477 1246 aaKnown RBP9.87□□□□□ -0.83
SNAP29-202ENST00000439214 DIXDC1Q155Q3 683 aa9.87□□□□□ -0.83
SNAP29-202ENST00000439214 SH3D19Q5HYK7 790 aa9.87□□□□□ -0.83
SNAP29-202ENST00000439214 TMUB1Q9BVT8 246 aa9.87□□□□□ -0.83
SNAP29-202ENST00000439214 NBPF26B4DH59 902 aa9.86□□□□□ -0.83
SNAP29-202ENST00000439214 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
SNAP29-202ENST00000439214 NUDT18Q6ZVK8 323 aa9.86□□□□□ -0.83
SNAP29-202ENST00000439214 PNMA3Q9UL41 463 aa9.86□□□□□ -0.83
SNAP29-202ENST00000439214 COL9A1P20849 921 aa9.85□□□□□ -0.83
SNAP29-202ENST00000439214 ARXQ96QS3 562 aa9.85□□□□□ -0.83
SNAP29-202ENST00000439214 BICRAQ9NZM4 1560 aa9.84□□□□□ -0.83
SNAP29-202ENST00000439214 RCCD1A6NED2 376 aa9.84□□□□□ -0.83
SNAP29-202ENST00000439214 HOXB1P14653 301 aaPredicted RBP9.84□□□□□ -0.83
SNAP29-202ENST00000439214 EMP3P54852 163 aa9.84□□□□□ -0.83
SNAP29-202ENST00000439214 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
SNAP29-202ENST00000439214 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
SNAP29-202ENST00000439214 KCNK17Q96T54 332 aa9.84□□□□□ -0.83
SNAP29-202ENST00000439214 DDX11L8A8MPP1 907 aa9.83□□□□□ -0.84
SNAP29-202ENST00000439214 RSPH4AQ5TD94 716 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms