RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 ZC3H13Q5T200 1668 aaKnown RBP15.84■□□□□ 0.13
HLA-DMB-259ENST00000438510 PRDM15P57071 1507 aaPredicted RBP15.84■□□□□ 0.13
HLA-DMB-259ENST00000438510 FER1L4A9Z1Z3 1794 aa15.83■□□□□ 0.12
HLA-DMB-259ENST00000438510 KDM4FA0A1W2PPD8 638 aa15.83■□□□□ 0.12
HLA-DMB-259ENST00000438510 SETD5Q9C0A6 1442 aa15.83■□□□□ 0.12
HLA-DMB-259ENST00000438510 FAM135AQ9P2D6 1515 aa15.83■□□□□ 0.12
HLA-DMB-259ENST00000438510 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
HLA-DMB-259ENST00000438510 MROH1Q8NDA8 1641 aa15.82■□□□□ 0.12
HLA-DMB-259ENST00000438510 KIF3BO15066 747 aa15.8■□□□□ 0.12
HLA-DMB-259ENST00000438510 CEP152O94986 1710 aa15.8■□□□□ 0.12
HLA-DMB-259ENST00000438510 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
HLA-DMB-259ENST00000438510 ADAMTSL3P82987 1691 aa15.79■□□□□ 0.12
HLA-DMB-259ENST00000438510 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
HLA-DMB-259ENST00000438510 KDM5DQ9BY66 1539 aa15.78■□□□□ 0.12
HLA-DMB-259ENST00000438510 MROH2AA6NES4 1674 aa15.78■□□□□ 0.12
HLA-DMB-259ENST00000438510 CLTCQ00610 1675 aaKnown RBP15.78■□□□□ 0.12
HLA-DMB-259ENST00000438510 KANK1Q14678 1352 aa15.76■□□□□ 0.11
HLA-DMB-259ENST00000438510 RAB3GAP2Q9H2M9 1393 aa15.76■□□□□ 0.11
HLA-DMB-259ENST00000438510 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
HLA-DMB-259ENST00000438510 VWDEQ8N2E2 1590 aa15.76■□□□□ 0.11
HLA-DMB-259ENST00000438510 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
HLA-DMB-259ENST00000438510 RIMS1Q86UR5 1692 aaKnown RBP15.75■□□□□ 0.11
HLA-DMB-259ENST00000438510 CAMSAP1Q5T5Y3 1602 aa15.75■□□□□ 0.11
HLA-DMB-259ENST00000438510 TET3O43151 1660 aa15.74■□□□□ 0.11
HLA-DMB-259ENST00000438510 MLECQ14165 292 aa15.74■□□□□ 0.11
HLA-DMB-259ENST00000438510 GGT6Q6P531 493 aa15.74■□□□□ 0.11
HLA-DMB-259ENST00000438510 PPP6R1Q9UPN7 881 aa15.74■□□□□ 0.11
HLA-DMB-259ENST00000438510 ABCC3O15438 1527 aa15.73■□□□□ 0.11
HLA-DMB-259ENST00000438510 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
HLA-DMB-259ENST00000438510 LMTK2Q8IWU2 1503 aa15.73■□□□□ 0.11
HLA-DMB-259ENST00000438510 HRCP23327 699 aa15.72■□□□□ 0.11
HLA-DMB-259ENST00000438510 MSH5O43196 834 aa15.71■□□□□ 0.11
HLA-DMB-259ENST00000438510 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
HLA-DMB-259ENST00000438510 C3P01024 1663 aa15.7■□□□□ 0.1
HLA-DMB-259ENST00000438510 EFCAB6Q5THR3 1501 aa15.7■□□□□ 0.1
HLA-DMB-259ENST00000438510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.1
HLA-DMB-259ENST00000438510 NUP155O75694 1391 aa15.7■□□□□ 0.1
HLA-DMB-259ENST00000438510 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
HLA-DMB-259ENST00000438510 E9PCH4 1651 aa15.68■□□□□ 0.1
HLA-DMB-259ENST00000438510 TRIM52Q96A61 297 aa15.68■□□□□ 0.1
HLA-DMB-259ENST00000438510 PZPP20742 1482 aa15.66■□□□□ 0.1
HLA-DMB-259ENST00000438510 PREX1Q8TCU6 1659 aa15.65■□□□□ 0.1
HLA-DMB-259ENST00000438510 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
HLA-DMB-259ENST00000438510 RPRD2Q5VT52 1461 aaKnown RBP15.65■□□□□ 0.1
HLA-DMB-259ENST00000438510 CFAP65Q6ZU64 1925 aaKnown RBP15.64■□□□□ 0.09
HLA-DMB-259ENST00000438510 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
HLA-DMB-259ENST00000438510 ARHGAP31Q2M1Z3 1444 aa15.63■□□□□ 0.09
HLA-DMB-259ENST00000438510 PTPRMP28827 1452 aa15.61■□□□□ 0.09
HLA-DMB-259ENST00000438510 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
HLA-DMB-259ENST00000438510 ZMYM3Q14202 1370 aa15.61■□□□□ 0.09
HLA-DMB-259ENST00000438510 NPATQ14207 1427 aa15.6■□□□□ 0.09
HLA-DMB-259ENST00000438510 SPATA31D1Q6ZQQ2 1576 aa15.59■□□□□ 0.09
HLA-DMB-259ENST00000438510 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.08
HLA-DMB-259ENST00000438510 ERVK-7P63135 1459 aa15.57■□□□□ 0.08
HLA-DMB-259ENST00000438510 TRPM2O94759 1503 aa15.56■□□□□ 0.08
HLA-DMB-259ENST00000438510 SETD1BQ9UPS6 1966 aaKnown RBP15.56■□□□□ 0.08
HLA-DMB-259ENST00000438510 MYO3AQ8NEV4 1616 aa15.55■□□□□ 0.08
HLA-DMB-259ENST00000438510 PKD2Q13563 968 aa15.55■□□□□ 0.08
HLA-DMB-259ENST00000438510 SYNMO15061 1565 aa15.54■□□□□ 0.08
HLA-DMB-259ENST00000438510 PIK3C2BO00750 1634 aa15.54■□□□□ 0.08
HLA-DMB-259ENST00000438510 NOS1P29475 1434 aa15.53■□□□□ 0.08
HLA-DMB-259ENST00000438510 KIF1BO60333 1816 aa15.53■□□□□ 0.08
HLA-DMB-259ENST00000438510 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
HLA-DMB-259ENST00000438510 DHX57Q6P158 1386 aaKnown RBP15.52■□□□□ 0.08
HLA-DMB-259ENST00000438510 PTPRTO14522 1441 aa15.51■□□□□ 0.07
HLA-DMB-259ENST00000438510 KDM5AP29375 1690 aaKnown RBP15.51■□□□□ 0.07
HLA-DMB-259ENST00000438510 CEBPAP49715 358 aaPredicted RBP15.51■□□□□ 0.07
HLA-DMB-259ENST00000438510 CLTCL1P53675 1640 aa15.5■□□□□ 0.07
HLA-DMB-259ENST00000438510 TNRQ92752 1358 aa15.5■□□□□ 0.07
HLA-DMB-259ENST00000438510 NLRP1Q9C000 1473 aa15.49■□□□□ 0.07
HLA-DMB-259ENST00000438510 FBXO31Q5XUX0 539 aaPredicted RBP15.49■□□□□ 0.07
HLA-DMB-259ENST00000438510 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
HLA-DMB-259ENST00000438510 CEP170BQ9Y4F5 1589 aaPredicted RBP15.48■□□□□ 0.07
HLA-DMB-259ENST00000438510 MYO5BQ9ULV0 1848 aa15.47■□□□□ 0.07
HLA-DMB-259ENST00000438510 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
HLA-DMB-259ENST00000438510 UBR1Q8IWV7 1749 aa15.47■□□□□ 0.07
HLA-DMB-259ENST00000438510 UGGT1Q9NYU2 1555 aa15.47■□□□□ 0.07
HLA-DMB-259ENST00000438510 PLA2R1Q13018 1463 aa15.46■□□□□ 0.07
HLA-DMB-259ENST00000438510 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
HLA-DMB-259ENST00000438510 ADGRB3O60242 1522 aa15.46■□□□□ 0.07
HLA-DMB-259ENST00000438510 UHRF1BP1Q6BDS2 1440 aa15.45■□□□□ 0.06
HLA-DMB-259ENST00000438510 SLC52A1Q9NWF4 448 aa15.45■□□□□ 0.06
HLA-DMB-259ENST00000438510 ANKRD30BQ9BXX2 1392 aa15.45■□□□□ 0.06
HLA-DMB-259ENST00000438510 TMEM131LA2VDJ0 1609 aa15.44■□□□□ 0.06
HLA-DMB-259ENST00000438510 A2ML1A8K2U0 1454 aa15.44■□□□□ 0.06
HLA-DMB-259ENST00000438510 NEURL4Q96JN8 1562 aa15.43■□□□□ 0.06
HLA-DMB-259ENST00000438510 CLSPNQ9HAW4 1339 aa15.42■□□□□ 0.06
HLA-DMB-259ENST00000438510 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMB-259ENST00000438510 IDI1Q13907 227 aa15.39■□□□□ 0.05
HLA-DMB-259ENST00000438510 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
HLA-DMB-259ENST00000438510 IFT172Q9UG01 1749 aa15.39■□□□□ 0.05
HLA-DMB-259ENST00000438510 POLR1AO95602 1720 aaPredicted RBP15.38■□□□□ 0.05
HLA-DMB-259ENST00000438510 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
HLA-DMB-259ENST00000438510 LMTK3Q96Q04 1460 aa15.38■□□□□ 0.05
HLA-DMB-259ENST00000438510 PPLO60437 1756 aa15.37■□□□□ 0.05
HLA-DMB-259ENST00000438510 SPATA31E1Q6ZUB1 1445 aa15.35■□□□□ 0.05
HLA-DMB-259ENST00000438510 SLIT1O75093 1534 aa15.34■□□□□ 0.05
HLA-DMB-259ENST00000438510 CHGAP10645 457 aaKnown RBP15.34■□□□□ 0.05
HLA-DMB-259ENST00000438510 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.04
HLA-DMB-259ENST00000438510 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms