RNA–Protein interactions for RNA: ENST00000437413.2

SMG1P3-202, Transcript of SMG1 pseudogene 3, humanhuman

TSL 4

Gene SMG1P3, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-202ENST00000437413 RIMS1Q86UR5 1692 aaKnown RBP33.25■■■□□ 2.91
SMG1P3-202ENST00000437413 ESF1Q9H501 851 aaKnown RBP33.24■■■□□ 2.91
SMG1P3-202ENST00000437413 GGT6Q6P531 493 aa33.22■■■□□ 2.91
SMG1P3-202ENST00000437413 PTPRMP28827 1452 aa33.22■■■□□ 2.91
SMG1P3-202ENST00000437413 ANKRD50Q9ULJ7 1429 aa33.19■■■□□ 2.9
SMG1P3-202ENST00000437413 MROH2AA6NES4 1674 aa33.19■■■□□ 2.9
SMG1P3-202ENST00000437413 DEPDC5O75140 1603 aa33.15■■■□□ 2.9
SMG1P3-202ENST00000437413 KDM5DQ9BY66 1539 aa33.14■■■□□ 2.9
SMG1P3-202ENST00000437413 ZC3H13Q5T200 1668 aaKnown RBP33.13■■■□□ 2.89
SMG1P3-202ENST00000437413 PRDM15P57071 1507 aaPredicted RBP33.12■■■□□ 2.89
SMG1P3-202ENST00000437413 CLTCQ00610 1675 aaKnown RBP33.11■■■□□ 2.89
SMG1P3-202ENST00000437413 MROH1Q8NDA8 1641 aa33.11■■■□□ 2.89
SMG1P3-202ENST00000437413 GCC2Q8IWJ2 1684 aa33.08■■■□□ 2.89
SMG1P3-202ENST00000437413 WASHC2CQ9Y4E1 1318 aa33.07■■■□□ 2.88
SMG1P3-202ENST00000437413 HFM1A2PYH4 1435 aa33.07■■■□□ 2.88
SMG1P3-202ENST00000437413 KANK1Q14678 1352 aa33.07■■■□□ 2.88
SMG1P3-202ENST00000437413 C3P01024 1663 aa33.05■■■□□ 2.88
SMG1P3-202ENST00000437413 NAIPQ13075 1403 aa33.04■■■□□ 2.88
SMG1P3-202ENST00000437413 ZMYM3Q14202 1370 aa33.04■■■□□ 2.88
SMG1P3-202ENST00000437413 ABCC3O15438 1527 aa33.02■■■□□ 2.88
SMG1P3-202ENST00000437413 UNC13BO14795 1591 aa33.01■■■□□ 2.88
SMG1P3-202ENST00000437413 VWDEQ8N2E2 1590 aa33■■■□□ 2.87
SMG1P3-202ENST00000437413 LMTK2Q8IWU2 1503 aa32.97■■■□□ 2.87
SMG1P3-202ENST00000437413 NPATQ14207 1427 aa32.97■■■□□ 2.87
SMG1P3-202ENST00000437413 CEP152O94986 1710 aa32.96■■■□□ 2.87
SMG1P3-202ENST00000437413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.95■■■□□ 2.87
SMG1P3-202ENST00000437413 PZPP20742 1482 aa32.94■■■□□ 2.86
SMG1P3-202ENST00000437413 CAMSAP1Q5T5Y3 1602 aa32.93■■■□□ 2.86
SMG1P3-202ENST00000437413 CEBPAP49715 358 aaPredicted RBP32.93■■■□□ 2.86
SMG1P3-202ENST00000437413 SETD1BQ9UPS6 1966 aaKnown RBP32.92■■■□□ 2.86
SMG1P3-202ENST00000437413 ARHGAP31Q2M1Z3 1444 aa32.92■■■□□ 2.86
SMG1P3-202ENST00000437413 ACIN1Q9UKV3 1341 aaKnown RBP32.91■■■□□ 2.86
SMG1P3-202ENST00000437413 IQGAP3Q86VI3 1631 aa32.88■■■□□ 2.85
SMG1P3-202ENST00000437413 PLPPR3Q6T4P5 718 aa32.88■■■□□ 2.85
SMG1P3-202ENST00000437413 PREX1Q8TCU6 1659 aa32.86■■■□□ 2.85
SMG1P3-202ENST00000437413 TET3O43151 1660 aa32.85■■■□□ 2.85
SMG1P3-202ENST00000437413 NUP155O75694 1391 aa32.83■■■□□ 2.85
SMG1P3-202ENST00000437413 EFCAB6Q5THR3 1501 aa32.83■■■□□ 2.85
SMG1P3-202ENST00000437413 SETD5Q9C0A6 1442 aa32.82■■■□□ 2.84
SMG1P3-202ENST00000437413 RPRD2Q5VT52 1461 aaKnown RBP32.81■■■□□ 2.84
SMG1P3-202ENST00000437413 SPATA31D1Q6ZQQ2 1576 aa32.79■■■□□ 2.84
SMG1P3-202ENST00000437413 UHRF1BP1Q6BDS2 1440 aa32.79■■■□□ 2.84
SMG1P3-202ENST00000437413 ERVK-7P63135 1459 aa32.76■■■□□ 2.84
SMG1P3-202ENST00000437413 TNRQ92752 1358 aa32.75■■■□□ 2.83
SMG1P3-202ENST00000437413 LMTK3Q96Q04 1460 aa32.74■■■□□ 2.83
SMG1P3-202ENST00000437413 FBXO31Q5XUX0 539 aaPredicted RBP32.73■■■□□ 2.83
SMG1P3-202ENST00000437413 MYO3AQ8NEV4 1616 aa32.73■■■□□ 2.83
SMG1P3-202ENST00000437413 ZNF142P52746 1687 aaPredicted RBP32.7■■■□□ 2.83
SMG1P3-202ENST00000437413 NLRP1Q9C000 1473 aa32.7■■■□□ 2.83
SMG1P3-202ENST00000437413 HRCP23327 699 aa32.69■■■□□ 2.82
SMG1P3-202ENST00000437413 TRIM26Q12899 539 aaPredicted RBP32.69■■■□□ 2.82
SMG1P3-202ENST00000437413 TRIM52Q96A61 297 aa32.69■■■□□ 2.82
SMG1P3-202ENST00000437413 E9PCH4 1651 aa32.67■■■□□ 2.82
SMG1P3-202ENST00000437413 RAB3GAP2Q9H2M9 1393 aa32.67■■■□□ 2.82
SMG1P3-202ENST00000437413 NOS1P29475 1434 aa32.66■■■□□ 2.82
SMG1P3-202ENST00000437413 CFAP65Q6ZU64 1925 aaKnown RBP32.65■■■□□ 2.82
SMG1P3-202ENST00000437413 CEP170BQ9Y4F5 1589 aaPredicted RBP32.65■■■□□ 2.82
SMG1P3-202ENST00000437413 A2ML1A8K2U0 1454 aa32.64■■■□□ 2.82
SMG1P3-202ENST00000437413 SLC4A1APQ9BWU0 796 aaKnown RBP32.58■■■□□ 2.81
SMG1P3-202ENST00000437413 SYNMO15061 1565 aa32.57■■■□□ 2.8
SMG1P3-202ENST00000437413 SLC52A1Q9NWF4 448 aa32.56■■■□□ 2.8
SMG1P3-202ENST00000437413 UGGT1Q9NYU2 1555 aa32.53■■■□□ 2.8
SMG1P3-202ENST00000437413 KDM5AP29375 1690 aaKnown RBP32.53■■■□□ 2.8
SMG1P3-202ENST00000437413 SPHKAPQ2M3C7 1700 aa32.52■■■□□ 2.8
SMG1P3-202ENST00000437413 PTPRTO14522 1441 aa32.51■■■□□ 2.8
SMG1P3-202ENST00000437413 PKD2Q13563 968 aa32.5■■■□□ 2.79
SMG1P3-202ENST00000437413 MPHOSPH9Q99550 1183 aa32.5■■■□□ 2.79
SMG1P3-202ENST00000437413 PLA2R1Q13018 1463 aa32.49■■■□□ 2.79
SMG1P3-202ENST00000437413 PIK3C2BO00750 1634 aa32.49■■■□□ 2.79
SMG1P3-202ENST00000437413 THEMISQ8N1K5 641 aaPredicted RBP32.49■■■□□ 2.79
SMG1P3-202ENST00000437413 HSPA2P54652 639 aa32.48■■■□□ 2.79
SMG1P3-202ENST00000437413 UBR1Q8IWV7 1749 aa32.46■■■□□ 2.79
SMG1P3-202ENST00000437413 IDI1Q13907 227 aa32.46■■■□□ 2.79
SMG1P3-202ENST00000437413 TRPM2O94759 1503 aa32.45■■■□□ 2.78
SMG1P3-202ENST00000437413 ADGRB3O60242 1522 aa32.41■■■□□ 2.78
SMG1P3-202ENST00000437413 STAG3Q9UJ98 1225 aa32.39■■■□□ 2.78
SMG1P3-202ENST00000437413 STRCQ7RTU9 1775 aa32.36■■■□□ 2.77
SMG1P3-202ENST00000437413 DMRT2Q9Y5R5 561 aa32.35■■■□□ 2.77
SMG1P3-202ENST00000437413 SLIT1O75093 1534 aa32.35■■■□□ 2.77
SMG1P3-202ENST00000437413 TMEM131LA2VDJ0 1609 aa32.33■■■□□ 2.77
SMG1P3-202ENST00000437413 ARHGAP23Q9P227 1491 aa32.33■■■□□ 2.77
SMG1P3-202ENST00000437413 POLR1AO95602 1720 aaPredicted RBP32.31■■■□□ 2.76
SMG1P3-202ENST00000437413 CLTCL1P53675 1640 aa32.31■■■□□ 2.76
SMG1P3-202ENST00000437413 ANKLE2Q86XL3 938 aa32.31■■■□□ 2.76
SMG1P3-202ENST00000437413 TMEM2Q9UHN6 1383 aa32.29■■■□□ 2.76
SMG1P3-202ENST00000437413 KIF1BO60333 1816 aa32.28■■■□□ 2.76
SMG1P3-202ENST00000437413 FOXD1Q16676 465 aa32.27■■■□□ 2.76
SMG1P3-202ENST00000437413 CCDC144AA2RUR9 1427 aa32.26■■■□□ 2.76
SMG1P3-202ENST00000437413 EID1Q9Y6B2 187 aa32.25■■■□□ 2.75
SMG1P3-202ENST00000437413 MYO5BQ9ULV0 1848 aa32.24■■■□□ 2.75
SMG1P3-202ENST00000437413 HDGFP51858 240 aaKnown RBP32.24■■■□□ 2.75
SMG1P3-202ENST00000437413 MED14O60244 1454 aa32.23■■■□□ 2.75
SMG1P3-202ENST00000437413 SCAF11Q99590 1463 aaKnown RBP32.23■■■□□ 2.75
SMG1P3-202ENST00000437413 CHGAP10645 457 aaKnown RBP32.22■■■□□ 2.75
SMG1P3-202ENST00000437413 NCKAP5LQ9HCH0 1330 aa32.22■■■□□ 2.75
SMG1P3-202ENST00000437413 NEURL4Q96JN8 1562 aa32.2■■■□□ 2.75
SMG1P3-202ENST00000437413 ANKRD30BQ9BXX2 1392 aa32.19■■■□□ 2.74
SMG1P3-202ENST00000437413 ZFYVE9O95405 1425 aa32.18■■■□□ 2.74
SMG1P3-202ENST00000437413 TXNDC2Q86VQ3 553 aa32.18■■■□□ 2.74
SMG1P3-202ENST00000437413 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms