RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 GGT6Q6P531 493 aa20.08■□□□□ 0.8
EXT1-203ENST00000437196 SIGLEC1Q9BZZ2 1709 aa20.07■□□□□ 0.8
EXT1-203ENST00000437196 KANK1Q14678 1352 aa20.07■□□□□ 0.8
EXT1-203ENST00000437196 ESF1Q9H501 851 aaKnown RBP20.06■□□□□ 0.8
EXT1-203ENST00000437196 DEPDC5O75140 1603 aa20.06■□□□□ 0.8
EXT1-203ENST00000437196 FAM135AQ9P2D6 1515 aa20.06■□□□□ 0.8
EXT1-203ENST00000437196 RAB3GAP2Q9H2M9 1393 aa20.04■□□□□ 0.8
EXT1-203ENST00000437196 UNC13BO14795 1591 aa20.03■□□□□ 0.8
EXT1-203ENST00000437196 MLECQ14165 292 aa20.03■□□□□ 0.8
EXT1-203ENST00000437196 PRDM15P57071 1507 aaPredicted RBP20.03■□□□□ 0.8
EXT1-203ENST00000437196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.79
EXT1-203ENST00000437196 WASHC2CQ9Y4E1 1318 aa20.01■□□□□ 0.79
EXT1-203ENST00000437196 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
EXT1-203ENST00000437196 ZC3H13Q5T200 1668 aaKnown RBP20■□□□□ 0.79
EXT1-203ENST00000437196 CNTLNQ9NXG0 1405 aa20■□□□□ 0.79
EXT1-203ENST00000437196 NUP155O75694 1391 aa19.99■□□□□ 0.79
EXT1-203ENST00000437196 MROH1Q8NDA8 1641 aa19.99■□□□□ 0.79
EXT1-203ENST00000437196 KDM5DQ9BY66 1539 aa19.99■□□□□ 0.79
EXT1-203ENST00000437196 FER1L4A9Z1Z3 1794 aa19.97■□□□□ 0.79
EXT1-203ENST00000437196 ADAMTSL3P82987 1691 aa19.96■□□□□ 0.79
EXT1-203ENST00000437196 VWDEQ8N2E2 1590 aa19.96■□□□□ 0.79
EXT1-203ENST00000437196 IQGAP3Q86VI3 1631 aa19.96■□□□□ 0.79
EXT1-203ENST00000437196 LMTK2Q8IWU2 1503 aa19.94■□□□□ 0.78
EXT1-203ENST00000437196 ABCC3O15438 1527 aa19.94■□□□□ 0.78
EXT1-203ENST00000437196 MROH2AA6NES4 1674 aa19.93■□□□□ 0.78
EXT1-203ENST00000437196 CLTCQ00610 1675 aaKnown RBP19.93■□□□□ 0.78
EXT1-203ENST00000437196 CEP152O94986 1710 aa19.92■□□□□ 0.78
EXT1-203ENST00000437196 MADDQ8WXG6 1647 aa19.92■□□□□ 0.78
EXT1-203ENST00000437196 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
EXT1-203ENST00000437196 TET3O43151 1660 aa19.91■□□□□ 0.78
EXT1-203ENST00000437196 CAMSAP1Q5T5Y3 1602 aa19.89■□□□□ 0.77
EXT1-203ENST00000437196 ARHGAP31Q2M1Z3 1444 aa19.89■□□□□ 0.77
EXT1-203ENST00000437196 RIMS1Q86UR5 1692 aaKnown RBP19.88■□□□□ 0.77
EXT1-203ENST00000437196 ZMYM3Q14202 1370 aa19.88■□□□□ 0.77
EXT1-203ENST00000437196 EFCAB6Q5THR3 1501 aa19.88■□□□□ 0.77
EXT1-203ENST00000437196 MPHOSPH9Q99550 1183 aa19.87■□□□□ 0.77
EXT1-203ENST00000437196 PZPP20742 1482 aa19.87■□□□□ 0.77
EXT1-203ENST00000437196 RPRD2Q5VT52 1461 aaKnown RBP19.87■□□□□ 0.77
EXT1-203ENST00000437196 KDM4FA0A1W2PPD8 638 aa19.83■□□□□ 0.76
EXT1-203ENST00000437196 PKD2Q13563 968 aa19.83■□□□□ 0.76
EXT1-203ENST00000437196 C3P01024 1663 aa19.82■□□□□ 0.76
EXT1-203ENST00000437196 PTPRMP28827 1452 aa19.81■□□□□ 0.76
EXT1-203ENST00000437196 NPATQ14207 1427 aa19.81■□□□□ 0.76
EXT1-203ENST00000437196 E9PCH4 1651 aa19.81■□□□□ 0.76
EXT1-203ENST00000437196 CFAP65Q6ZU64 1925 aaKnown RBP19.79■□□□□ 0.76
EXT1-203ENST00000437196 SETD1BQ9UPS6 1966 aaKnown RBP19.78■□□□□ 0.76
EXT1-203ENST00000437196 PREX1Q8TCU6 1659 aa19.76■□□□□ 0.75
EXT1-203ENST00000437196 CEBPAP49715 358 aaPredicted RBP19.76■□□□□ 0.75
EXT1-203ENST00000437196 ERVK-7P63135 1459 aa19.75■□□□□ 0.75
EXT1-203ENST00000437196 SPATA31D1Q6ZQQ2 1576 aa19.75■□□□□ 0.75
EXT1-203ENST00000437196 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
EXT1-203ENST00000437196 NOS1P29475 1434 aa19.74■□□□□ 0.75
EXT1-203ENST00000437196 SPHKAPQ2M3C7 1700 aa19.74■□□□□ 0.75
EXT1-203ENST00000437196 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
EXT1-203ENST00000437196 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
EXT1-203ENST00000437196 PTPRTO14522 1441 aa19.73■□□□□ 0.75
EXT1-203ENST00000437196 TNRQ92752 1358 aa19.72■□□□□ 0.75
EXT1-203ENST00000437196 SLC52A1Q9NWF4 448 aa19.72■□□□□ 0.75
EXT1-203ENST00000437196 TRPM2O94759 1503 aa19.7■□□□□ 0.74
EXT1-203ENST00000437196 FOXD1Q16676 465 aa19.7■□□□□ 0.74
EXT1-203ENST00000437196 NLRP1Q9C000 1473 aa19.68■□□□□ 0.74
EXT1-203ENST00000437196 CCDC144AA2RUR9 1427 aa19.68■□□□□ 0.74
EXT1-203ENST00000437196 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
EXT1-203ENST00000437196 ANKRD30BQ9BXX2 1392 aa19.67■□□□□ 0.74
EXT1-203ENST00000437196 SYNMO15061 1565 aa19.67■□□□□ 0.74
EXT1-203ENST00000437196 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
EXT1-203ENST00000437196 UHRF1BP1Q6BDS2 1440 aa19.65■□□□□ 0.74
EXT1-203ENST00000437196 PLA2R1Q13018 1463 aa19.64■□□□□ 0.74
EXT1-203ENST00000437196 PIK3C2BO00750 1634 aa19.64■□□□□ 0.74
EXT1-203ENST00000437196 MYO3AQ8NEV4 1616 aa19.63■□□□□ 0.73
EXT1-203ENST00000437196 IDI1Q13907 227 aa19.62■□□□□ 0.73
EXT1-203ENST00000437196 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
EXT1-203ENST00000437196 KIF1BO60333 1816 aa19.62■□□□□ 0.73
EXT1-203ENST00000437196 KDM5AP29375 1690 aaKnown RBP19.61■□□□□ 0.73
EXT1-203ENST00000437196 CLTCL1P53675 1640 aa19.61■□□□□ 0.73
EXT1-203ENST00000437196 A2ML1A8K2U0 1454 aa19.61■□□□□ 0.73
EXT1-203ENST00000437196 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
EXT1-203ENST00000437196 CEP170BQ9Y4F5 1589 aaPredicted RBP19.59■□□□□ 0.73
EXT1-203ENST00000437196 UGGT1Q9NYU2 1555 aa19.58■□□□□ 0.72
EXT1-203ENST00000437196 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.72
EXT1-203ENST00000437196 CHGAP10645 457 aaKnown RBP19.57■□□□□ 0.72
EXT1-203ENST00000437196 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
EXT1-203ENST00000437196 ADGRB3O60242 1522 aa19.56■□□□□ 0.72
EXT1-203ENST00000437196 NEURL4Q96JN8 1562 aa19.56■□□□□ 0.72
EXT1-203ENST00000437196 UBR1Q8IWV7 1749 aa19.54■□□□□ 0.72
EXT1-203ENST00000437196 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
EXT1-203ENST00000437196 HDGFP51858 240 aaKnown RBP19.53■□□□□ 0.72
EXT1-203ENST00000437196 ZNF326Q5BKZ1 582 aaKnown RBP19.51■□□□□ 0.71
EXT1-203ENST00000437196 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
EXT1-203ENST00000437196 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
EXT1-203ENST00000437196 MYO5BQ9ULV0 1848 aa19.5■□□□□ 0.71
EXT1-203ENST00000437196 SIN3AQ96ST3 1273 aa19.5■□□□□ 0.71
EXT1-203ENST00000437196 SPATA31E1Q6ZUB1 1445 aa19.49■□□□□ 0.71
EXT1-203ENST00000437196 LMTK3Q96Q04 1460 aa19.49■□□□□ 0.71
EXT1-203ENST00000437196 STAC3Q96MF2 364 aa19.49■□□□□ 0.71
EXT1-203ENST00000437196 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.48■□□□□ 0.71
EXT1-203ENST00000437196 TMEM2Q9UHN6 1383 aa19.47■□□□□ 0.71
EXT1-203ENST00000437196 RGL3Q3MIN7 710 aa19.47■□□□□ 0.71
EXT1-203ENST00000437196 TIMELESSQ9UNS1 1208 aa19.47■□□□□ 0.71
EXT1-203ENST00000437196 EID1Q9Y6B2 187 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms