RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 HS6ST3Q8IZP7 471 aa10.57□□□□□ -0.72
LSM3P3-201ENST00000436601 MYO5CQ9NQX4 1742 aa10.57□□□□□ -0.72
LSM3P3-201ENST00000436601 PLEKHH2Q8IVE3 1493 aa10.56□□□□□ -0.72
LSM3P3-201ENST00000436601 MAP3K4Q9Y6R4 1608 aa10.56□□□□□ -0.72
LSM3P3-201ENST00000436601 RSPH4AQ5TD94 716 aa10.56□□□□□ -0.72
LSM3P3-201ENST00000436601 CHIC2Q9UKJ5 165 aa10.56□□□□□ -0.72
LSM3P3-201ENST00000436601 AKNAQ7Z591 1439 aa10.56□□□□□ -0.72
LSM3P3-201ENST00000436601 TSHZ2Q9NRE2 1034 aa10.55□□□□□ -0.72
LSM3P3-201ENST00000436601 ABCC1P33527 1531 aa10.54□□□□□ -0.72
LSM3P3-201ENST00000436601 SYCP2Q9BX26 1530 aa10.54□□□□□ -0.72
LSM3P3-201ENST00000436601 AFAP1Q8N556 730 aa10.54□□□□□ -0.72
LSM3P3-201ENST00000436601 SCAPERQ9BY12 1400 aa10.54□□□□□ -0.72
LSM3P3-201ENST00000436601 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
LSM3P3-201ENST00000436601 DNMT1P26358 1616 aaKnown RBP10.54□□□□□ -0.72
LSM3P3-201ENST00000436601 NEO1Q92859 1461 aa10.54□□□□□ -0.72
LSM3P3-201ENST00000436601 ARHGEF5Q12774 1597 aa10.53□□□□□ -0.72
LSM3P3-201ENST00000436601 TSPY4P0CV99 314 aa10.53□□□□□ -0.72
LSM3P3-201ENST00000436601 TSPY10P0CW01 314 aa10.53□□□□□ -0.72
LSM3P3-201ENST00000436601 RRP7BPQ9NSQ0 103 aa10.53□□□□□ -0.72
LSM3P3-201ENST00000436601 ADGRL1O94910 1474 aa10.53□□□□□ -0.72
LSM3P3-201ENST00000436601 CCDC141Q6ZP82 1450 aa10.53□□□□□ -0.72
LSM3P3-201ENST00000436601 ROCK1Q13464 1354 aa10.52□□□□□ -0.72
LSM3P3-201ENST00000436601 PRKCSHP14314 528 aaPredicted RBP10.52□□□□□ -0.73
LSM3P3-201ENST00000436601 HFM1A2PYH4 1435 aa10.51□□□□□ -0.73
LSM3P3-201ENST00000436601 NCOA1Q15788 1441 aa10.51□□□□□ -0.73
LSM3P3-201ENST00000436601 C9orf84Q5VXU9 1444 aa10.51□□□□□ -0.73
LSM3P3-201ENST00000436601 SETD5Q9C0A6 1442 aa10.51□□□□□ -0.73
LSM3P3-201ENST00000436601 SHANK2Q9UPX8 1470 aa10.51□□□□□ -0.73
LSM3P3-201ENST00000436601 NAIPQ13075 1403 aa10.5□□□□□ -0.73
LSM3P3-201ENST00000436601 ADGRL2O95490 1459 aa10.5□□□□□ -0.73
LSM3P3-201ENST00000436601 CACNB1Q02641 598 aaPredicted RBP10.5□□□□□ -0.73
LSM3P3-201ENST00000436601 ANKRD30AQ9BXX3 1397 aa10.5□□□□□ -0.73
LSM3P3-201ENST00000436601 TEX14Q8IWB6 1497 aa10.49□□□□□ -0.73
LSM3P3-201ENST00000436601 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
LSM3P3-201ENST00000436601 NUBP1P53384 320 aa10.49□□□□□ -0.73
LSM3P3-201ENST00000436601 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
LSM3P3-201ENST00000436601 SPAG9O60271 1321 aaKnown RBP10.49□□□□□ -0.73
LSM3P3-201ENST00000436601 RAB3GAP2Q9H2M9 1393 aa10.49□□□□□ -0.73
LSM3P3-201ENST00000436601 POGZQ7Z3K3 1410 aa10.49□□□□□ -0.73
LSM3P3-201ENST00000436601 CFAP74Q9C0B2 1584 aa10.48□□□□□ -0.73
LSM3P3-201ENST00000436601 PPRC1Q5VV67 1664 aaKnown RBP10.48□□□□□ -0.73
LSM3P3-201ENST00000436601 HRCP23327 699 aa10.48□□□□□ -0.73
LSM3P3-201ENST00000436601 KIF13AQ9H1H9 1805 aa10.48□□□□□ -0.73
LSM3P3-201ENST00000436601 DENND4BO75064 1496 aaPredicted RBP10.48□□□□□ -0.73
LSM3P3-201ENST00000436601 RTEL1-TNFRSF6BF6WH68 1400 aa10.47□□□□□ -0.73
LSM3P3-201ENST00000436601 ZNF518AQ6AHZ1 1483 aa10.47□□□□□ -0.73
LSM3P3-201ENST00000436601 MAST1Q9Y2H9 1570 aa10.47□□□□□ -0.73
LSM3P3-201ENST00000436601 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
LSM3P3-201ENST00000436601 COL17A1Q9UMD9 1497 aaPredicted RBP10.46□□□□□ -0.74
LSM3P3-201ENST00000436601 CROCC2H7BZ55 1655 aa10.46□□□□□ -0.74
LSM3P3-201ENST00000436601 KIF15Q9NS87 1388 aa10.45□□□□□ -0.74
LSM3P3-201ENST00000436601 TPRNQ4KMQ1 711 aa10.45□□□□□ -0.74
LSM3P3-201ENST00000436601 RBM42Q9BTD8 480 aaKnown RBP10.45□□□□□ -0.74
LSM3P3-201ENST00000436601 MLH3Q9UHC1 1453 aa10.44□□□□□ -0.74
LSM3P3-201ENST00000436601 RIOK3O14730 519 aaKnown RBP10.44□□□□□ -0.74
LSM3P3-201ENST00000436601 AKT1S1Q96B36 256 aa10.44□□□□□ -0.74
LSM3P3-201ENST00000436601 KDM5CP41229 1560 aa10.43□□□□□ -0.74
LSM3P3-201ENST00000436601 ZFYVE16Q7Z3T8 1539 aa10.43□□□□□ -0.74
LSM3P3-201ENST00000436601 ANKRD50Q9ULJ7 1429 aa10.43□□□□□ -0.74
LSM3P3-201ENST00000436601 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
LSM3P3-201ENST00000436601 KDM6BO15054 1643 aa10.43□□□□□ -0.74
LSM3P3-201ENST00000436601 FAM212AQ96EL1 285 aa10.42□□□□□ -0.74
LSM3P3-201ENST00000436601 MYT1LQ9UL68 1186 aa10.42□□□□□ -0.74
LSM3P3-201ENST00000436601 FRMPD1Q5SYB0 1578 aa10.42□□□□□ -0.74
LSM3P3-201ENST00000436601 INO80Q9ULG1 1556 aaPredicted RBP10.42□□□□□ -0.74
LSM3P3-201ENST00000436601 ATP7AQ04656 1500 aa10.42□□□□□ -0.74
LSM3P3-201ENST00000436601 PLXNC1O60486 1568 aa10.41□□□□□ -0.74
LSM3P3-201ENST00000436601 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
LSM3P3-201ENST00000436601 TSPOAP1O95153 1857 aa10.4□□□□□ -0.74
LSM3P3-201ENST00000436601 DHX57Q6P158 1386 aaKnown RBP10.4□□□□□ -0.74
LSM3P3-201ENST00000436601 DHX29Q7Z478 1369 aaKnown RBP10.4□□□□□ -0.74
LSM3P3-201ENST00000436601 GCC2Q8IWJ2 1684 aa10.4□□□□□ -0.74
LSM3P3-201ENST00000436601 YEATS2Q9ULM3 1422 aa10.4□□□□□ -0.75
LSM3P3-201ENST00000436601 DUOX2Q9NRD8 1548 aa10.39□□□□□ -0.75
LSM3P3-201ENST00000436601 CCER1Q8TC90 406 aaPredicted RBP10.39□□□□□ -0.75
LSM3P3-201ENST00000436601 RICTORQ6R327 1708 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 ZMYM4Q5VZL5 1548 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 MAGI2Q86UL8 1455 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 VGFO15240 615 aaPredicted RBP10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 PRR29P0C7W0 189 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 CHRM1P11229 460 aaPredicted RBP10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 NBR1Q14596 966 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 TRIM52Q96A61 297 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 KIDINS220Q9ULH0 1771 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 ERBINQ96RT1 1412 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 HECW2Q9P2P5 1572 aa10.38□□□□□ -0.75
LSM3P3-201ENST00000436601 ACIN1Q9UKV3 1341 aaKnown RBP10.37□□□□□ -0.75
LSM3P3-201ENST00000436601 A2MP01023 1474 aa10.37□□□□□ -0.75
LSM3P3-201ENST00000436601 CREBZFQ9NS37 354 aa10.37□□□□□ -0.75
LSM3P3-201ENST00000436601 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
LSM3P3-201ENST00000436601 MPHOSPH9Q99550 1183 aa10.36□□□□□ -0.75
LSM3P3-201ENST00000436601 KIF3BO15066 747 aa10.35□□□□□ -0.75
LSM3P3-201ENST00000436601 NKX1-1Q15270 411 aaPredicted RBP10.35□□□□□ -0.75
LSM3P3-201ENST00000436601 SGIP1Q9BQI5 828 aa10.35□□□□□ -0.75
LSM3P3-201ENST00000436601 ABCA6Q8N139 1617 aa10.35□□□□□ -0.75
LSM3P3-201ENST00000436601 NUP155O75694 1391 aa10.35□□□□□ -0.75
LSM3P3-201ENST00000436601 ATP10AO60312 1499 aa10.35□□□□□ -0.75
LSM3P3-201ENST00000436601 DIP2CQ9Y2E4 1556 aa10.35□□□□□ -0.75
LSM3P3-201ENST00000436601 CLEC11AQ9Y240 323 aa10.34□□□□□ -0.75
LSM3P3-201ENST00000436601 PZPP20742 1482 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms