RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 MROH2AA6NES4 1674 aa17.69■□□□□ 0.42
COPS7B-212ENST00000436564 PTPRKQ15262 1439 aa17.69■□□□□ 0.42
COPS7B-212ENST00000436564 A2MP01023 1474 aa17.69■□□□□ 0.42
COPS7B-212ENST00000436564 KIAA1107Q9UPP5 1409 aa17.68■□□□□ 0.42
COPS7B-212ENST00000436564 TCOF1Q13428 1488 aaKnown RBP17.68■□□□□ 0.42
COPS7B-212ENST00000436564 PIP4K2BP78356 416 aa17.66■□□□□ 0.42
COPS7B-212ENST00000436564 PLEKHH2Q8IVE3 1493 aa17.66■□□□□ 0.42
COPS7B-212ENST00000436564 ATP7AQ04656 1500 aa17.66■□□□□ 0.42
COPS7B-212ENST00000436564 CDC42BPAQ5VT25 1732 aa17.65■□□□□ 0.42
COPS7B-212ENST00000436564 TOM1O60784 492 aa17.65■□□□□ 0.42
COPS7B-212ENST00000436564 HSPA1LP34931 641 aa17.65■□□□□ 0.42
COPS7B-212ENST00000436564 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
COPS7B-212ENST00000436564 CCNB3Q8WWL7 1395 aa17.65■□□□□ 0.42
COPS7B-212ENST00000436564 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
COPS7B-212ENST00000436564 FYCO1Q9BQS8 1478 aa17.64■□□□□ 0.41
COPS7B-212ENST00000436564 MYO3AQ8NEV4 1616 aa17.64■□□□□ 0.41
COPS7B-212ENST00000436564 CLTCQ00610 1675 aaKnown RBP17.63■□□□□ 0.41
COPS7B-212ENST00000436564 PLXNC1O60486 1568 aa17.62■□□□□ 0.41
COPS7B-212ENST00000436564 A2ML1A8K2U0 1454 aa17.6■□□□□ 0.41
COPS7B-212ENST00000436564 ZNF142P52746 1687 aaPredicted RBP17.6■□□□□ 0.41
COPS7B-212ENST00000436564 INO80Q9ULG1 1556 aaPredicted RBP17.58■□□□□ 0.41
COPS7B-212ENST00000436564 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.4
COPS7B-212ENST00000436564 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.4
COPS7B-212ENST00000436564 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
COPS7B-212ENST00000436564 TNRQ92752 1358 aa17.56■□□□□ 0.4
COPS7B-212ENST00000436564 ANKLE2Q86XL3 938 aa17.56■□□□□ 0.4
COPS7B-212ENST00000436564 DHX29Q7Z478 1369 aaKnown RBP17.55■□□□□ 0.4
COPS7B-212ENST00000436564 KIF3BO15066 747 aa17.55■□□□□ 0.4
COPS7B-212ENST00000436564 CPS1P31327 1500 aa17.55■□□□□ 0.4
COPS7B-212ENST00000436564 SHANK2Q9UPX8 1470 aa17.55■□□□□ 0.4
COPS7B-212ENST00000436564 DNMT1P26358 1616 aaKnown RBP17.54■□□□□ 0.4
COPS7B-212ENST00000436564 WASHC2CQ9Y4E1 1318 aa17.53■□□□□ 0.4
COPS7B-212ENST00000436564 CAPN15O75808 1086 aa17.53■□□□□ 0.4
COPS7B-212ENST00000436564 ATXN8OSP0DMR3 200 aa17.53■□□□□ 0.4
COPS7B-212ENST00000436564 THEMISQ8N1K5 641 aaPredicted RBP17.53■□□□□ 0.4
COPS7B-212ENST00000436564 MED1Q15648 1581 aaPredicted RBP17.53■□□□□ 0.4
COPS7B-212ENST00000436564 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.4
COPS7B-212ENST00000436564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.39
COPS7B-212ENST00000436564 MBD5Q9P267 1494 aa17.51■□□□□ 0.39
COPS7B-212ENST00000436564 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
COPS7B-212ENST00000436564 ADGBQ8N7X0 1667 aa17.49■□□□□ 0.39
COPS7B-212ENST00000436564 PZPP20742 1482 aa17.49■□□□□ 0.39
COPS7B-212ENST00000436564 NEURL4Q96JN8 1562 aa17.47■□□□□ 0.39
COPS7B-212ENST00000436564 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
COPS7B-212ENST00000436564 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
COPS7B-212ENST00000436564 RSPH4AQ5TD94 716 aa17.46■□□□□ 0.39
COPS7B-212ENST00000436564 KDM5DQ9BY66 1539 aa17.46■□□□□ 0.39
COPS7B-212ENST00000436564 FAM135AQ9P2D6 1515 aa17.45■□□□□ 0.38
COPS7B-212ENST00000436564 TIAM1Q13009 1591 aa17.44■□□□□ 0.38
COPS7B-212ENST00000436564 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
COPS7B-212ENST00000436564 UGGT1Q9NYU2 1555 aa17.43■□□□□ 0.38
COPS7B-212ENST00000436564 VWDEQ8N2E2 1590 aa17.42■□□□□ 0.38
COPS7B-212ENST00000436564 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
COPS7B-212ENST00000436564 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
COPS7B-212ENST00000436564 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
COPS7B-212ENST00000436564 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
COPS7B-212ENST00000436564 MED14O60244 1454 aa17.42■□□□□ 0.38
COPS7B-212ENST00000436564 CCDC141Q6ZP82 1450 aa17.42■□□□□ 0.38
COPS7B-212ENST00000436564 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
COPS7B-212ENST00000436564 EHBP1L1Q8N3D4 1523 aa17.41■□□□□ 0.38
COPS7B-212ENST00000436564 DEPDC5O75140 1603 aa17.36■□□□□ 0.37
COPS7B-212ENST00000436564 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
COPS7B-212ENST00000436564 CAMSAP2Q08AD1 1489 aa17.36■□□□□ 0.37
COPS7B-212ENST00000436564 LRRC7Q96NW7 1537 aa17.36■□□□□ 0.37
COPS7B-212ENST00000436564 NCOA2Q15596 1464 aa17.33■□□□□ 0.37
COPS7B-212ENST00000436564 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
COPS7B-212ENST00000436564 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
COPS7B-212ENST00000436564 RGS17Q9UGC6 210 aaPredicted RBP17.3■□□□□ 0.36
COPS7B-212ENST00000436564 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
COPS7B-212ENST00000436564 RNF17Q9BXT8 1623 aaKnown RBP17.29■□□□□ 0.36
COPS7B-212ENST00000436564 ABCC3O15438 1527 aa17.28■□□□□ 0.36
COPS7B-212ENST00000436564 SCAF11Q99590 1463 aaKnown RBP17.27■□□□□ 0.36
COPS7B-212ENST00000436564 LTKP29376 864 aa17.27■□□□□ 0.36
COPS7B-212ENST00000436564 EID1Q9Y6B2 187 aa17.27■□□□□ 0.36
COPS7B-212ENST00000436564 SYNMO15061 1565 aa17.27■□□□□ 0.35
COPS7B-212ENST00000436564 ARHGEF5Q12774 1597 aa17.26■□□□□ 0.35
COPS7B-212ENST00000436564 STRCP1A6NGW2 1772 aa17.23■□□□□ 0.35
COPS7B-212ENST00000436564 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
COPS7B-212ENST00000436564 ZC3H13Q5T200 1668 aaKnown RBP17.21■□□□□ 0.35
COPS7B-212ENST00000436564 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.34
COPS7B-212ENST00000436564 ARHGAP23Q9P227 1491 aa17.19■□□□□ 0.34
COPS7B-212ENST00000436564 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
COPS7B-212ENST00000436564 TMEM94Q12767 1356 aa17.18■□□□□ 0.34
COPS7B-212ENST00000436564 SLIT1O75093 1534 aa17.18■□□□□ 0.34
COPS7B-212ENST00000436564 TMEM2Q9UHN6 1383 aa17.17■□□□□ 0.34
COPS7B-212ENST00000436564 DSG3P32926 999 aa17.17■□□□□ 0.34
COPS7B-212ENST00000436564 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
COPS7B-212ENST00000436564 EIF2AK4Q9P2K8 1649 aaKnown RBP17.17■□□□□ 0.34
COPS7B-212ENST00000436564 UBR1Q8IWV7 1749 aa17.16■□□□□ 0.34
COPS7B-212ENST00000436564 ARHGAP31Q2M1Z3 1444 aa17.16■□□□□ 0.34
COPS7B-212ENST00000436564 KCNA6P17658 529 aa17.16■□□□□ 0.34
COPS7B-212ENST00000436564 PROSER2Q86WR7 435 aaPredicted RBP17.16■□□□□ 0.34
COPS7B-212ENST00000436564 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
COPS7B-212ENST00000436564 MROH1Q8NDA8 1641 aa17.15■□□□□ 0.34
COPS7B-212ENST00000436564 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
COPS7B-212ENST00000436564 RRP7BPQ9NSQ0 103 aa17.15■□□□□ 0.34
COPS7B-212ENST00000436564 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-212ENST00000436564 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
COPS7B-212ENST00000436564 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.33
COPS7B-212ENST00000436564 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms