RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
APTX-208ENST00000436040 ROCK1Q13464 1354 aa17.48■□□□□ 0.39
APTX-208ENST00000436040 RRP7BPQ9NSQ0 103 aa17.48■□□□□ 0.39
APTX-208ENST00000436040 FAM135AQ9P2D6 1515 aa17.47■□□□□ 0.39
APTX-208ENST00000436040 MROH2AA6NES4 1674 aa17.46■□□□□ 0.39
APTX-208ENST00000436040 KIF3BO15066 747 aa17.46■□□□□ 0.39
APTX-208ENST00000436040 CNTLNQ9NXG0 1405 aa17.46■□□□□ 0.39
APTX-208ENST00000436040 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
APTX-208ENST00000436040 CLTCQ00610 1675 aaKnown RBP17.45■□□□□ 0.38
APTX-208ENST00000436040 GGT6Q6P531 493 aa17.44■□□□□ 0.38
APTX-208ENST00000436040 MROH1Q8NDA8 1641 aa17.44■□□□□ 0.38
APTX-208ENST00000436040 DEPDC5O75140 1603 aa17.43■□□□□ 0.38
APTX-208ENST00000436040 ESF1Q9H501 851 aaKnown RBP17.43■□□□□ 0.38
APTX-208ENST00000436040 C3P01024 1663 aa17.42■□□□□ 0.38
APTX-208ENST00000436040 KDM5DQ9BY66 1539 aa17.42■□□□□ 0.38
APTX-208ENST00000436040 ZC3H13Q5T200 1668 aaKnown RBP17.42■□□□□ 0.38
APTX-208ENST00000436040 PRDM15P57071 1507 aaPredicted RBP17.41■□□□□ 0.38
APTX-208ENST00000436040 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
APTX-208ENST00000436040 GCC2Q8IWJ2 1684 aa17.38■□□□□ 0.37
APTX-208ENST00000436040 ABCC3O15438 1527 aa17.37■□□□□ 0.37
APTX-208ENST00000436040 CEP152O94986 1710 aa17.37■□□□□ 0.37
APTX-208ENST00000436040 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
APTX-208ENST00000436040 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
APTX-208ENST00000436040 UNC13BO14795 1591 aa17.35■□□□□ 0.37
APTX-208ENST00000436040 VWDEQ8N2E2 1590 aa17.35■□□□□ 0.37
APTX-208ENST00000436040 CEBPAP49715 358 aaPredicted RBP17.33■□□□□ 0.37
APTX-208ENST00000436040 SETD1BQ9UPS6 1966 aaKnown RBP17.33■□□□□ 0.37
APTX-208ENST00000436040 CAMSAP1Q5T5Y3 1602 aa17.33■□□□□ 0.36
APTX-208ENST00000436040 HFM1A2PYH4 1435 aa17.33■□□□□ 0.36
APTX-208ENST00000436040 NAIPQ13075 1403 aa17.33■□□□□ 0.36
APTX-208ENST00000436040 KANK1Q14678 1352 aa17.32■□□□□ 0.36
APTX-208ENST00000436040 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
APTX-208ENST00000436040 NPATQ14207 1427 aa17.32■□□□□ 0.36
APTX-208ENST00000436040 PREX1Q8TCU6 1659 aa17.32■□□□□ 0.36
APTX-208ENST00000436040 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
APTX-208ENST00000436040 LMTK2Q8IWU2 1503 aa17.32■□□□□ 0.36
APTX-208ENST00000436040 PZPP20742 1482 aa17.31■□□□□ 0.36
APTX-208ENST00000436040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
APTX-208ENST00000436040 MYT1Q01538 1121 aa17.28■□□□□ 0.36
APTX-208ENST00000436040 IQGAP3Q86VI3 1631 aa17.28■□□□□ 0.36
APTX-208ENST00000436040 ARHGAP31Q2M1Z3 1444 aa17.27■□□□□ 0.36
APTX-208ENST00000436040 TET3O43151 1660 aa17.26■□□□□ 0.35
APTX-208ENST00000436040 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
APTX-208ENST00000436040 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
APTX-208ENST00000436040 SPATA31D1Q6ZQQ2 1576 aa17.25■□□□□ 0.35
APTX-208ENST00000436040 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
APTX-208ENST00000436040 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
APTX-208ENST00000436040 ERVK-7P63135 1459 aa17.23■□□□□ 0.35
APTX-208ENST00000436040 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
APTX-208ENST00000436040 CFAP65Q6ZU64 1925 aaKnown RBP17.22■□□□□ 0.35
APTX-208ENST00000436040 NUP155O75694 1391 aa17.22■□□□□ 0.35
APTX-208ENST00000436040 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
APTX-208ENST00000436040 TNRQ92752 1358 aa17.21■□□□□ 0.35
APTX-208ENST00000436040 RPRD2Q5VT52 1461 aaKnown RBP17.21■□□□□ 0.35
APTX-208ENST00000436040 E9PCH4 1651 aa17.19■□□□□ 0.34
APTX-208ENST00000436040 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
APTX-208ENST00000436040 SETD5Q9C0A6 1442 aa17.18■□□□□ 0.34
APTX-208ENST00000436040 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
APTX-208ENST00000436040 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
APTX-208ENST00000436040 NOS1P29475 1434 aa17.15■□□□□ 0.34
APTX-208ENST00000436040 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
APTX-208ENST00000436040 SYNMO15061 1565 aa17.15■□□□□ 0.34
APTX-208ENST00000436040 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
APTX-208ENST00000436040 HSPA2P54652 639 aa17.12■□□□□ 0.33
APTX-208ENST00000436040 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
APTX-208ENST00000436040 SPHKAPQ2M3C7 1700 aa17.1■□□□□ 0.33
APTX-208ENST00000436040 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
APTX-208ENST00000436040 UGGT1Q9NYU2 1555 aa17.1■□□□□ 0.33
APTX-208ENST00000436040 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
APTX-208ENST00000436040 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
APTX-208ENST00000436040 STRCQ7RTU9 1775 aa17.08■□□□□ 0.33
APTX-208ENST00000436040 PLA2R1Q13018 1463 aa17.08■□□□□ 0.33
APTX-208ENST00000436040 PTPRTO14522 1441 aa17.06■□□□□ 0.32
APTX-208ENST00000436040 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
APTX-208ENST00000436040 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
APTX-208ENST00000436040 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
APTX-208ENST00000436040 TRPM2O94759 1503 aa17.04■□□□□ 0.32
APTX-208ENST00000436040 PKD2Q13563 968 aa17.04■□□□□ 0.32
APTX-208ENST00000436040 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
APTX-208ENST00000436040 IDI1Q13907 227 aa17.04■□□□□ 0.32
APTX-208ENST00000436040 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
APTX-208ENST00000436040 CENPBP07199 599 aaPredicted RBP17.03■□□□□ 0.32
APTX-208ENST00000436040 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
APTX-208ENST00000436040 MYO5BQ9ULV0 1848 aa17.01■□□□□ 0.31
APTX-208ENST00000436040 TMEM131LA2VDJ0 1609 aa17.01■□□□□ 0.31
APTX-208ENST00000436040 SLIT1O75093 1534 aa17.01■□□□□ 0.31
APTX-208ENST00000436040 FOXD1Q16676 465 aa17.01■□□□□ 0.31
APTX-208ENST00000436040 CLTCL1P53675 1640 aa17■□□□□ 0.31
APTX-208ENST00000436040 ARHGAP23Q9P227 1491 aa17■□□□□ 0.31
APTX-208ENST00000436040 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
APTX-208ENST00000436040 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
APTX-208ENST00000436040 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
APTX-208ENST00000436040 KIF1BO60333 1816 aa16.97■□□□□ 0.31
APTX-208ENST00000436040 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
APTX-208ENST00000436040 TMEM2Q9UHN6 1383 aa16.96■□□□□ 0.31
APTX-208ENST00000436040 ANKLE2Q86XL3 938 aa16.95■□□□□ 0.3
APTX-208ENST00000436040 MED14O60244 1454 aa16.94■□□□□ 0.3
APTX-208ENST00000436040 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
APTX-208ENST00000436040 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
APTX-208ENST00000436040 IQGAP1P46940 1657 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms