RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 MMRN1Q13201 1228 aa9.11□□□□□ -0.95
HMGB1P45-201ENST00000435986 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P45-201ENST00000435986 GRXCR2A6NFK2 248 aa9.1□□□□□ -0.95
HMGB1P45-201ENST00000435986 NUTM2FA1L443 756 aa9.09□□□□□ -0.95
HMGB1P45-201ENST00000435986 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
HMGB1P45-201ENST00000435986 FOSBP53539 338 aa9.06□□□□□ -0.96
HMGB1P45-201ENST00000435986 JPH4Q96JJ6 628 aa9.06□□□□□ -0.96
HMGB1P45-201ENST00000435986 PTGER2P43116 358 aa9.05□□□□□ -0.96
HMGB1P45-201ENST00000435986 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
HMGB1P45-201ENST00000435986 MINK1Q8N4C8 1332 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P45-201ENST00000435986 PBX2P40425 430 aa9.04□□□□□ -0.96
HMGB1P45-201ENST00000435986 ZNF454Q8N9F8 522 aa9.04□□□□□ -0.96
HMGB1P45-201ENST00000435986 FCHSD2O94868 740 aa9.03□□□□□ -0.96
HMGB1P45-201ENST00000435986 C14orf37Q86TY3 774 aa9.03□□□□□ -0.96
HMGB1P45-201ENST00000435986 HIC1Q14526 733 aa9.01□□□□□ -0.97
HMGB1P45-201ENST00000435986 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
HMGB1P45-201ENST00000435986 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
HMGB1P45-201ENST00000435986 PCDHGA10Q9Y5H3 936 aa9.01□□□□□ -0.97
HMGB1P45-201ENST00000435986 ARHGAP33O14559 1287 aa9□□□□□ -0.97
HMGB1P45-201ENST00000435986 TRIM66O15016 1216 aa9□□□□□ -0.97
HMGB1P45-201ENST00000435986 GNPATO15228 680 aa9□□□□□ -0.97
HMGB1P45-201ENST00000435986 LSM11P83369 360 aaKnown RBP eCLIP9□□□□□ -0.97
HMGB1P45-201ENST00000435986 MAP2K5Q13163 448 aa9□□□□□ -0.97
HMGB1P45-201ENST00000435986 DDX12PQ92771 950 aa9□□□□□ -0.97
HMGB1P45-201ENST00000435986 BCL2L12Q9HB09 334 aa9□□□□□ -0.97
HMGB1P45-201ENST00000435986 PHF14O94880 888 aa8.99□□□□□ -0.97
HMGB1P45-201ENST00000435986 OSBPP22059 807 aa8.99□□□□□ -0.97
HMGB1P45-201ENST00000435986 PSEN2P49810 448 aa8.99□□□□□ -0.97
HMGB1P45-201ENST00000435986 PDE4DQ08499 809 aa8.99□□□□□ -0.97
HMGB1P45-201ENST00000435986 ZDHHC16Q969W1 377 aa8.99□□□□□ -0.97
HMGB1P45-201ENST00000435986 ADAM33Q9BZ11 813 aa8.98□□□□□ -0.97
HMGB1P45-201ENST00000435986 DMRTA1Q5VZB9 504 aa8.97□□□□□ -0.97
HMGB1P45-201ENST00000435986 EPAS1Q99814 870 aa8.97□□□□□ -0.97
HMGB1P45-201ENST00000435986 KDM4CQ9H3R0 1056 aa8.97□□□□□ -0.97
HMGB1P45-201ENST00000435986 TYW1BQ6NUM6 668 aa8.96□□□□□ -0.98
HMGB1P45-201ENST00000435986 IRF6O14896 467 aa8.95□□□□□ -0.98
HMGB1P45-201ENST00000435986 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
HMGB1P45-201ENST00000435986 FBXW7Q969H0 707 aa8.94□□□□□ -0.98
HMGB1P45-201ENST00000435986 GPBP1L1Q9HC44 474 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P45-201ENST00000435986 GPR37O15354 613 aa8.93□□□□□ -0.98
HMGB1P45-201ENST00000435986 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
HMGB1P45-201ENST00000435986 CCDC102AQ96A19 550 aa8.93□□□□□ -0.98
HMGB1P45-201ENST00000435986 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
HMGB1P45-201ENST00000435986 PTPREP23469 700 aa8.92□□□□□ -0.98
HMGB1P45-201ENST00000435986 TK2O00142 265 aa8.91□□□□□ -0.98
HMGB1P45-201ENST00000435986 MAP3K7O43318 606 aa8.91□□□□□ -0.98
HMGB1P45-201ENST00000435986 PRIM1P49642 420 aaKnown RBP8.91□□□□□ -0.98
HMGB1P45-201ENST00000435986 AMHR2Q16671 573 aa8.91□□□□□ -0.98
HMGB1P45-201ENST00000435986 ADGRD1Q6QNK2 874 aa8.91□□□□□ -0.98
HMGB1P45-201ENST00000435986 EN1Q05925 392 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P45-201ENST00000435986 PTGDRQ13258 359 aa8.9□□□□□ -0.98
HMGB1P45-201ENST00000435986 TTLL12Q14166 644 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P45-201ENST00000435986 MYT1LQ9UL68 1186 aa8.9□□□□□ -0.98
HMGB1P45-201ENST00000435986 PPP1R3GB7ZBB8 358 aa8.89□□□□□ -0.99
HMGB1P45-201ENST00000435986 HRO43593 1189 aa8.89□□□□□ -0.99
HMGB1P45-201ENST00000435986 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
HMGB1P45-201ENST00000435986 ZBED2Q9BTP6 218 aa8.89□□□□□ -0.99
HMGB1P45-201ENST00000435986 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
HMGB1P45-201ENST00000435986 COL9A1P20849 921 aa8.88□□□□□ -0.99
HMGB1P45-201ENST00000435986 C6orf132Q5T0Z8 1188 aa8.88□□□□□ -0.99
HMGB1P45-201ENST00000435986 CERKQ8TCT0 537 aa8.88□□□□□ -0.99
HMGB1P45-201ENST00000435986 RNF166Q96A37 237 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P45-201ENST00000435986 VPS9D1Q9Y2B5 631 aa8.88□□□□□ -0.99
HMGB1P45-201ENST00000435986 RBM33Q96EV2 1170 aaKnown RBP8.87□□□□□ -0.99
HMGB1P45-201ENST00000435986 TSR1Q2NL82 804 aaKnown RBP8.86□□□□□ -0.99
HMGB1P45-201ENST00000435986 CLCN1P35523 988 aa8.83□□□□□ -1
HMGB1P45-201ENST00000435986 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
HMGB1P45-201ENST00000435986 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
HMGB1P45-201ENST00000435986 PROX2Q3B8N5 592 aa8.82□□□□□ -1
HMGB1P45-201ENST00000435986 FAM117AQ9C073 453 aa8.82□□□□□ -1
HMGB1P45-201ENST00000435986 OATP04181 439 aa8.81□□□□□ -1
HMGB1P45-201ENST00000435986 FECHP22830 423 aa8.81□□□□□ -1
HMGB1P45-201ENST00000435986 CDHR5Q9HBB8 845 aa8.81□□□□□ -1
HMGB1P45-201ENST00000435986 GOPCQ9HD26 462 aa8.79□□□□□ -1
HMGB1P45-201ENST00000435986 GIGYF2Q6Y7W6 1299 aaKnown RBP8.78□□□□□ -1
HMGB1P45-201ENST00000435986 GPCPD1Q9NPB8 672 aa8.78□□□□□ -1
HMGB1P45-201ENST00000435986 RABGEF1Q9UJ41 708 aa8.78□□□□□ -1
HMGB1P45-201ENST00000435986 TRIM6-TRIM34B2RNG4 842 aa8.77□□□□□ -1.01
HMGB1P45-201ENST00000435986 ONECUT3O60422 494 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P45-201ENST00000435986 PCMTD1Q96MG8 357 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P45-201ENST00000435986 ARXQ96QS3 562 aa8.77□□□□□ -1.01
HMGB1P45-201ENST00000435986 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1.01
HMGB1P45-201ENST00000435986 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P45-201ENST00000435986 RBM27Q9P2N5 1060 aaKnown RBP8.77□□□□□ -1.01
HMGB1P45-201ENST00000435986 FLIIQ13045 1269 aa8.75□□□□□ -1.01
HMGB1P45-201ENST00000435986 FAM198AQ9UFP1 575 aa8.75□□□□□ -1.01
HMGB1P45-201ENST00000435986 TSKSQ9UJT2 592 aa8.75□□□□□ -1.01
HMGB1P45-201ENST00000435986 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P45-201ENST00000435986 CDCA7LQ96GN5 454 aa8.74□□□□□ -1.01
HMGB1P45-201ENST00000435986 NBPF3Q9H094 633 aa8.74□□□□□ -1.01
HMGB1P45-201ENST00000435986 KIAA1468Q9P260 1216 aa8.74□□□□□ -1.01
HMGB1P45-201ENST00000435986 PLEKHG3A1L390 1219 aa8.73□□□□□ -1.01
HMGB1P45-201ENST00000435986 PRSS12P56730 875 aa8.73□□□□□ -1.01
HMGB1P45-201ENST00000435986 MDM2Q00987 491 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P45-201ENST00000435986 RBM46Q8TBY0 533 aaKnown RBP8.73□□□□□ -1.01
HMGB1P45-201ENST00000435986 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
HMGB1P45-201ENST00000435986 MRPL50Q8N5N7 158 aaKnown RBP8.72□□□□□ -1.01
HMGB1P45-201ENST00000435986 TTC13Q8NBP0 860 aa8.72□□□□□ -1.01
HMGB1P45-201ENST00000435986 KCTD12Q96CX2 325 aaKnown RBP8.72□□□□□ -1.01
HMGB1P45-201ENST00000435986 C3orf80F5H4A9 247 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms