RNA–Protein interactions for RNA: ENST00000435617.1

LINC00444-201, long intergenic non-protein coding RNA 444, humanhuman

TSL 5 BASIC

Gene LINC00444, Length 215 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00444-201ENST00000435617 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
LINC00444-201ENST00000435617 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
LINC00444-201ENST00000435617 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
LINC00444-201ENST00000435617 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
LINC00444-201ENST00000435617 ATP7AQ04656 1500 aa13.65□□□□□ -0.22
LINC00444-201ENST00000435617 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
LINC00444-201ENST00000435617 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
LINC00444-201ENST00000435617 MIA2Q96PC5 1412 aa13.64□□□□□ -0.23
LINC00444-201ENST00000435617 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
LINC00444-201ENST00000435617 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
LINC00444-201ENST00000435617 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
LINC00444-201ENST00000435617 SYNMO15061 1565 aa13.62□□□□□ -0.23
LINC00444-201ENST00000435617 WASHC2CQ9Y4E1 1318 aa13.61□□□□□ -0.23
LINC00444-201ENST00000435617 KIF3BO15066 747 aa13.6□□□□□ -0.23
LINC00444-201ENST00000435617 PZPP20742 1482 aa13.6□□□□□ -0.23
LINC00444-201ENST00000435617 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
LINC00444-201ENST00000435617 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
LINC00444-201ENST00000435617 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
LINC00444-201ENST00000435617 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
LINC00444-201ENST00000435617 NLRP1Q9C000 1473 aa13.59□□□□□ -0.23
LINC00444-201ENST00000435617 ARHGAP35Q9NRY4 1499 aa13.59□□□□□ -0.23
LINC00444-201ENST00000435617 LRRIQ1Q96JM4 1722 aa13.59□□□□□ -0.23
LINC00444-201ENST00000435617 INO80Q9ULG1 1556 aaPredicted RBP13.58□□□□□ -0.23
LINC00444-201ENST00000435617 MEX3CQ5U5Q3 659 aaKnown RBP13.58□□□□□ -0.24
LINC00444-201ENST00000435617 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
LINC00444-201ENST00000435617 GPATCH8Q9UKJ3 1502 aaKnown RBP13.57□□□□□ -0.24
LINC00444-201ENST00000435617 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
LINC00444-201ENST00000435617 RXRBP28702 533 aa13.56□□□□□ -0.24
LINC00444-201ENST00000435617 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
LINC00444-201ENST00000435617 LTKP29376 864 aa13.55□□□□□ -0.24
LINC00444-201ENST00000435617 TMEM94Q12767 1356 aa13.55□□□□□ -0.24
LINC00444-201ENST00000435617 JCADQ9P266 1359 aa13.55□□□□□ -0.24
LINC00444-201ENST00000435617 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
LINC00444-201ENST00000435617 ROBO1Q9Y6N7 1651 aa13.54□□□□□ -0.24
LINC00444-201ENST00000435617 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
LINC00444-201ENST00000435617 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
LINC00444-201ENST00000435617 EEA1Q15075 1411 aa13.53□□□□□ -0.24
LINC00444-201ENST00000435617 KDM5DQ9BY66 1539 aa13.53□□□□□ -0.24
LINC00444-201ENST00000435617 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
LINC00444-201ENST00000435617 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
LINC00444-201ENST00000435617 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
LINC00444-201ENST00000435617 ZC3H13Q5T200 1668 aaKnown RBP13.51□□□□□ -0.25
LINC00444-201ENST00000435617 SCAF11Q99590 1463 aaKnown RBP13.5□□□□□ -0.25
LINC00444-201ENST00000435617 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
LINC00444-201ENST00000435617 LRP6O75581 1613 aa13.5□□□□□ -0.25
LINC00444-201ENST00000435617 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
LINC00444-201ENST00000435617 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
LINC00444-201ENST00000435617 KCNA6P17658 529 aa13.47□□□□□ -0.25
LINC00444-201ENST00000435617 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
LINC00444-201ENST00000435617 PHLPP1O60346 1717 aa13.47□□□□□ -0.25
LINC00444-201ENST00000435617 CASKIN1Q8WXD9 1431 aa13.47□□□□□ -0.25
LINC00444-201ENST00000435617 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.25
LINC00444-201ENST00000435617 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
LINC00444-201ENST00000435617 RTEL1-TNFRSF6BF6WH68 1400 aa13.46□□□□□ -0.26
LINC00444-201ENST00000435617 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
LINC00444-201ENST00000435617 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
LINC00444-201ENST00000435617 NUTM2DQ5VT03 806 aaPredicted RBP13.45□□□□□ -0.26
LINC00444-201ENST00000435617 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
LINC00444-201ENST00000435617 SLC26A8Q96RN1 970 aa13.45□□□□□ -0.26
LINC00444-201ENST00000435617 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
LINC00444-201ENST00000435617 MBD5Q9P267 1494 aa13.44□□□□□ -0.26
LINC00444-201ENST00000435617 NCOA2Q15596 1464 aa13.43□□□□□ -0.26
LINC00444-201ENST00000435617 MAP3K1Q13233 1512 aa13.43□□□□□ -0.26
LINC00444-201ENST00000435617 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
LINC00444-201ENST00000435617 MSH6P52701 1360 aa13.42□□□□□ -0.26
LINC00444-201ENST00000435617 ERVK-7P63135 1459 aa13.42□□□□□ -0.26
LINC00444-201ENST00000435617 AFF2P51816 1311 aa13.41□□□□□ -0.26
LINC00444-201ENST00000435617 ARHGAP23Q9P227 1491 aa13.41□□□□□ -0.26
LINC00444-201ENST00000435617 UBR1Q8IWV7 1749 aa13.4□□□□□ -0.26
LINC00444-201ENST00000435617 CFAP65Q6ZU64 1925 aaKnown RBP13.4□□□□□ -0.26
LINC00444-201ENST00000435617 SETBP1Q9Y6X0 1596 aa13.4□□□□□ -0.26
LINC00444-201ENST00000435617 RGS12O14924 1447 aa13.39□□□□□ -0.27
LINC00444-201ENST00000435617 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
LINC00444-201ENST00000435617 QTRT2Q9H974 415 aaKnown RBP13.39□□□□□ -0.27
LINC00444-201ENST00000435617 EP400Q96L91 3159 aa13.39□□□□□ -0.27
LINC00444-201ENST00000435617 SLIT1O75093 1534 aa13.39□□□□□ -0.27
LINC00444-201ENST00000435617 FOXD1Q16676 465 aa13.38□□□□□ -0.27
LINC00444-201ENST00000435617 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
LINC00444-201ENST00000435617 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
LINC00444-201ENST00000435617 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
LINC00444-201ENST00000435617 ABCC3O15438 1527 aa13.37□□□□□ -0.27
LINC00444-201ENST00000435617 PRDM15P57071 1507 aaPredicted RBP13.37□□□□□ -0.27
LINC00444-201ENST00000435617 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
LINC00444-201ENST00000435617 BCANQ96GW7 911 aa13.36□□□□□ -0.27
LINC00444-201ENST00000435617 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
LINC00444-201ENST00000435617 C8orf37Q96NL8 207 aa13.34□□□□□ -0.27
LINC00444-201ENST00000435617 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
LINC00444-201ENST00000435617 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.28
LINC00444-201ENST00000435617 FYCO1Q9BQS8 1478 aa13.33□□□□□ -0.28
LINC00444-201ENST00000435617 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
LINC00444-201ENST00000435617 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
LINC00444-201ENST00000435617 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
LINC00444-201ENST00000435617 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
LINC00444-201ENST00000435617 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
LINC00444-201ENST00000435617 RSPH4AQ5TD94 716 aa13.3□□□□□ -0.28
LINC00444-201ENST00000435617 TET3O43151 1660 aa13.3□□□□□ -0.28
LINC00444-201ENST00000435617 SHPRHQ149N8 1683 aa13.3□□□□□ -0.28
LINC00444-201ENST00000435617 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
LINC00444-201ENST00000435617 ATF3P18847 181 aa13.28□□□□□ -0.28
LINC00444-201ENST00000435617 IDI1Q13907 227 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms