RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
RPE-207ENST00000435437 GGT6Q6P531 493 aa13.88□□□□□ -0.19
RPE-207ENST00000435437 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
RPE-207ENST00000435437 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
RPE-207ENST00000435437 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
RPE-207ENST00000435437 CEP152O94986 1710 aa13.85□□□□□ -0.19
RPE-207ENST00000435437 NPATQ14207 1427 aa13.85□□□□□ -0.19
RPE-207ENST00000435437 KIF3BO15066 747 aa13.85□□□□□ -0.19
RPE-207ENST00000435437 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
RPE-207ENST00000435437 ABCC3O15438 1527 aa13.84□□□□□ -0.19
RPE-207ENST00000435437 DUOX2Q9NRD8 1548 aa13.84□□□□□ -0.19
RPE-207ENST00000435437 DEPDC5O75140 1603 aa13.83□□□□□ -0.2
RPE-207ENST00000435437 UHRF1BP1Q6BDS2 1440 aa13.83□□□□□ -0.2
RPE-207ENST00000435437 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
RPE-207ENST00000435437 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
RPE-207ENST00000435437 ADGRL2O95490 1459 aa13.82□□□□□ -0.2
RPE-207ENST00000435437 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
RPE-207ENST00000435437 APLP2Q06481 763 aa13.82□□□□□ -0.2
RPE-207ENST00000435437 FBXO31Q5XUX0 539 aaPredicted RBP13.82□□□□□ -0.2
RPE-207ENST00000435437 PZPP20742 1482 aa13.81□□□□□ -0.2
RPE-207ENST00000435437 PRDM15P57071 1507 aaPredicted RBP13.81□□□□□ -0.2
RPE-207ENST00000435437 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
RPE-207ENST00000435437 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
RPE-207ENST00000435437 NCOA1Q15788 1441 aa13.81□□□□□ -0.2
RPE-207ENST00000435437 VWDEQ8N2E2 1590 aa13.8□□□□□ -0.2
RPE-207ENST00000435437 CEP170BQ9Y4F5 1589 aaPredicted RBP13.8□□□□□ -0.2
RPE-207ENST00000435437 ZC3H13Q5T200 1668 aaKnown RBP13.8□□□□□ -0.2
RPE-207ENST00000435437 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
RPE-207ENST00000435437 RRP7BPQ9NSQ0 103 aa13.78□□□□□ -0.2
RPE-207ENST00000435437 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
RPE-207ENST00000435437 ERBINQ96RT1 1412 aa13.78□□□□□ -0.2
RPE-207ENST00000435437 SPATA31D1Q6ZQQ2 1576 aa13.78□□□□□ -0.2
RPE-207ENST00000435437 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
RPE-207ENST00000435437 ILDR1Q86SU0 546 aaPredicted RBP13.76□□□□□ -0.21
RPE-207ENST00000435437 ESF1Q9H501 851 aaKnown RBP13.76□□□□□ -0.21
RPE-207ENST00000435437 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
RPE-207ENST00000435437 NEURL4Q96JN8 1562 aa13.74□□□□□ -0.21
RPE-207ENST00000435437 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
RPE-207ENST00000435437 WASHC2CQ9Y4E1 1318 aa13.73□□□□□ -0.21
RPE-207ENST00000435437 LTBP4Q8N2S1 1624 aa13.73□□□□□ -0.21
RPE-207ENST00000435437 FAM50AQ14320 339 aaKnown RBP13.73□□□□□ -0.21
RPE-207ENST00000435437 LMTK2Q8IWU2 1503 aa13.73□□□□□ -0.21
RPE-207ENST00000435437 PTPRTO14522 1441 aa13.73□□□□□ -0.21
RPE-207ENST00000435437 TNRQ92752 1358 aa13.72□□□□□ -0.21
RPE-207ENST00000435437 ANKRD30AQ9BXX3 1397 aa13.72□□□□□ -0.21
RPE-207ENST00000435437 PLA2R1Q13018 1463 aa13.72□□□□□ -0.21
RPE-207ENST00000435437 ARHGAP31Q2M1Z3 1444 aa13.71□□□□□ -0.22
RPE-207ENST00000435437 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
RPE-207ENST00000435437 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
RPE-207ENST00000435437 UNC13BO14795 1591 aa13.7□□□□□ -0.22
RPE-207ENST00000435437 SYNMO15061 1565 aa13.7□□□□□ -0.22
RPE-207ENST00000435437 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
RPE-207ENST00000435437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.22
RPE-207ENST00000435437 POLR1AO95602 1720 aaPredicted RBP13.69□□□□□ -0.22
RPE-207ENST00000435437 ANKRD50Q9ULJ7 1429 aa13.68□□□□□ -0.22
RPE-207ENST00000435437 EFCAB6Q5THR3 1501 aa13.67□□□□□ -0.22
RPE-207ENST00000435437 ROCK1Q13464 1354 aa13.67□□□□□ -0.22
RPE-207ENST00000435437 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
RPE-207ENST00000435437 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
RPE-207ENST00000435437 NOS1P29475 1434 aa13.65□□□□□ -0.22
RPE-207ENST00000435437 PIK3C2BO00750 1634 aa13.65□□□□□ -0.22
RPE-207ENST00000435437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
RPE-207ENST00000435437 E9PCH4 1651 aa13.63□□□□□ -0.23
RPE-207ENST00000435437 TET3O43151 1660 aa13.63□□□□□ -0.23
RPE-207ENST00000435437 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
RPE-207ENST00000435437 STRCP1A6NGW2 1772 aa13.63□□□□□ -0.23
RPE-207ENST00000435437 ARHGAP23Q9P227 1491 aa13.62□□□□□ -0.23
RPE-207ENST00000435437 IQGAP3Q86VI3 1631 aa13.62□□□□□ -0.23
RPE-207ENST00000435437 GCC2Q8IWJ2 1684 aa13.62□□□□□ -0.23
RPE-207ENST00000435437 MED14O60244 1454 aa13.61□□□□□ -0.23
RPE-207ENST00000435437 FBXO41Q8TF61 875 aa13.61□□□□□ -0.23
RPE-207ENST00000435437 MYO5BQ9ULV0 1848 aa13.61□□□□□ -0.23
RPE-207ENST00000435437 ZNF335Q9H4Z2 1342 aaPredicted RBP13.61□□□□□ -0.23
RPE-207ENST00000435437 SLIT1O75093 1534 aa13.59□□□□□ -0.23
RPE-207ENST00000435437 ITGAEP38570 1179 aa13.59□□□□□ -0.23
RPE-207ENST00000435437 PKD2Q13563 968 aa13.59□□□□□ -0.23
RPE-207ENST00000435437 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
RPE-207ENST00000435437 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
RPE-207ENST00000435437 NAIPQ13075 1403 aa13.58□□□□□ -0.24
RPE-207ENST00000435437 IDI1Q13907 227 aa13.58□□□□□ -0.24
RPE-207ENST00000435437 IQGAP1P46940 1657 aa13.58□□□□□ -0.24
RPE-207ENST00000435437 LTKP29376 864 aa13.57□□□□□ -0.24
RPE-207ENST00000435437 KANK1Q14678 1352 aa13.57□□□□□ -0.24
RPE-207ENST00000435437 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
RPE-207ENST00000435437 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
RPE-207ENST00000435437 TMEM131LA2VDJ0 1609 aa13.55□□□□□ -0.24
RPE-207ENST00000435437 ALKQ9UM73 1620 aa13.55□□□□□ -0.24
RPE-207ENST00000435437 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
RPE-207ENST00000435437 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
RPE-207ENST00000435437 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
RPE-207ENST00000435437 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
RPE-207ENST00000435437 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
RPE-207ENST00000435437 IQSEC2Q5JU85 1478 aa13.51□□□□□ -0.25
RPE-207ENST00000435437 HFM1A2PYH4 1435 aa13.51□□□□□ -0.25
RPE-207ENST00000435437 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
RPE-207ENST00000435437 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
RPE-207ENST00000435437 NUP155O75694 1391 aa13.5□□□□□ -0.25
RPE-207ENST00000435437 SPHKAPQ2M3C7 1700 aa13.5□□□□□ -0.25
RPE-207ENST00000435437 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
RPE-207ENST00000435437 CPS1P31327 1500 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms