RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 ZNF316A6NFI3 1004 aaPredicted RBP8.52□□□□□ -1.05
HMGB3P10-201ENST00000434734 TRIM66O15016 1216 aa8.52□□□□□ -1.05
HMGB3P10-201ENST00000434734 ONECUT3O60422 494 aaPredicted RBP8.52□□□□□ -1.05
HMGB3P10-201ENST00000434734 MFAP1P55081 439 aaKnown RBP8.52□□□□□ -1.05
HMGB3P10-201ENST00000434734 FLIIQ13045 1269 aa8.52□□□□□ -1.05
HMGB3P10-201ENST00000434734 TMCO4Q5TGY1 634 aa8.52□□□□□ -1.05
HMGB3P10-201ENST00000434734 CDK11BP21127 795 aaKnown RBP8.5□□□□□ -1.05
HMGB3P10-201ENST00000434734 CRISPLD2Q9H0B8 497 aa8.5□□□□□ -1.05
HMGB3P10-201ENST00000434734 CDK11AQ9UQ88 783 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P10-201ENST00000434734 PLEKHG3A1L390 1219 aa8.49□□□□□ -1.05
HMGB3P10-201ENST00000434734 A6NJR5 290 aa8.49□□□□□ -1.05
HMGB3P10-201ENST00000434734 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
HMGB3P10-201ENST00000434734 GZF1Q9H116 711 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P10-201ENST00000434734 FAM205CA6NFA0 338 aa8.48□□□□□ -1.05
HMGB3P10-201ENST00000434734 PDE4AP27815 886 aa8.48□□□□□ -1.05
HMGB3P10-201ENST00000434734 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
HMGB3P10-201ENST00000434734 ERBB3P21860 1342 aa8.48□□□□□ -1.05
HMGB3P10-201ENST00000434734 DSG2Q14126 1118 aa8.47□□□□□ -1.05
HMGB3P10-201ENST00000434734 ARSIQ5FYB1 569 aa8.47□□□□□ -1.05
HMGB3P10-201ENST00000434734 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
HMGB3P10-201ENST00000434734 PLPP6Q8IY26 295 aa8.47□□□□□ -1.05
HMGB3P10-201ENST00000434734 HSP90B1P14625 803 aaKnown RBP8.46□□□□□ -1.06
HMGB3P10-201ENST00000434734 SMYD5Q6GMV2 418 aa8.46□□□□□ -1.06
HMGB3P10-201ENST00000434734 PTCD2Q8WV60 388 aaKnown RBP8.46□□□□□ -1.06
HMGB3P10-201ENST00000434734 PCDHGA4Q9Y5G9 962 aa8.45□□□□□ -1.06
HMGB3P10-201ENST00000434734 GPIHBP1Q8IV16 184 aa8.44□□□□□ -1.06
HMGB3P10-201ENST00000434734 RETREG2Q8NC44 543 aa8.44□□□□□ -1.06
HMGB3P10-201ENST00000434734 NCKAP5LQ9HCH0 1330 aa8.44□□□□□ -1.06
HMGB3P10-201ENST00000434734 POTEB3A0JP26 581 aa8.43□□□□□ -1.06
HMGB3P10-201ENST00000434734 TBC1D12O60347 775 aa8.43□□□□□ -1.06
HMGB3P10-201ENST00000434734 POTEBQ6S5H4 581 aa8.43□□□□□ -1.06
HMGB3P10-201ENST00000434734 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
HMGB3P10-201ENST00000434734 HMGB1P09429 215 aaKnown RBP8.42□□□□□ -1.06
HMGB3P10-201ENST00000434734 IRF5Q13568 498 aa8.42□□□□□ -1.06
HMGB3P10-201ENST00000434734 VARS2Q5ST30 1063 aaKnown RBP8.42□□□□□ -1.06
HMGB3P10-201ENST00000434734 PPP1R15BQ5SWA1 713 aa8.42□□□□□ -1.06
HMGB3P10-201ENST00000434734 PUS7Q96PZ0 661 aaKnown RBP8.42□□□□□ -1.06
HMGB3P10-201ENST00000434734 MFSD10Q14728 455 aa8.41□□□□□ -1.06
HMGB3P10-201ENST00000434734 PSDA5PKW4 1024 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P10-201ENST00000434734 NUDT7P0C024 238 aa8.4□□□□□ -1.06
HMGB3P10-201ENST00000434734 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.06
HMGB3P10-201ENST00000434734 KHSRPQ92945 711 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGB3P10-201ENST00000434734 DDX27Q96GQ7 796 aaKnown RBP8.4□□□□□ -1.06
HMGB3P10-201ENST00000434734 LARP6Q9BRS8 491 aaKnown RBP8.39□□□□□ -1.07
HMGB3P10-201ENST00000434734 CHMP4AQ9BY43 222 aa8.39□□□□□ -1.07
HMGB3P10-201ENST00000434734 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
HMGB3P10-201ENST00000434734 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
HMGB3P10-201ENST00000434734 E9PSI1 815 aa8.37□□□□□ -1.07
HMGB3P10-201ENST00000434734 MLLT3P42568 568 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P10-201ENST00000434734 CCDC97Q96F63 343 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P10-201ENST00000434734 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
HMGB3P10-201ENST00000434734 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
HMGB3P10-201ENST00000434734 DDRGK1Q96HY6 314 aa8.36□□□□□ -1.07
HMGB3P10-201ENST00000434734 LHX6Q9UPM6 363 aa8.36□□□□□ -1.07
HMGB3P10-201ENST00000434734 MCM6Q14566 821 aa8.35□□□□□ -1.07
HMGB3P10-201ENST00000434734 PROSER2Q86WR7 435 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P10-201ENST00000434734 PBX2P40425 430 aa8.34□□□□□ -1.07
HMGB3P10-201ENST00000434734 POM121Q96HA1 1249 aa8.34□□□□□ -1.07
HMGB3P10-201ENST00000434734 SERPINA10Q9UK55 444 aa8.34□□□□□ -1.07
HMGB3P10-201ENST00000434734 SPNS2Q8IVW8 549 aa8.33□□□□□ -1.08
HMGB3P10-201ENST00000434734 FNBP4Q8N3X1 1017 aaPredicted RBP8.33□□□□□ -1.08
HMGB3P10-201ENST00000434734 FBXW7Q969H0 707 aa8.33□□□□□ -1.08
HMGB3P10-201ENST00000434734 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
HMGB3P10-201ENST00000434734 UPF1Q92900 1129 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMGB3P10-201ENST00000434734 GPR37O15354 613 aa8.3□□□□□ -1.08
HMGB3P10-201ENST00000434734 PARP9Q8IXQ6 854 aa8.3□□□□□ -1.08
HMGB3P10-201ENST00000434734 ARIH1Q9Y4X5 557 aaPredicted RBP8.3□□□□□ -1.08
HMGB3P10-201ENST00000434734 CAMK2BQ13554 666 aa8.29□□□□□ -1.08
HMGB3P10-201ENST00000434734 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
HMGB3P10-201ENST00000434734 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P10-201ENST00000434734 MAP3K9P80192 1104 aa8.28□□□□□ -1.08
HMGB3P10-201ENST00000434734 PTGER2P43116 358 aa8.27□□□□□ -1.09
HMGB3P10-201ENST00000434734 EVI5O60447 810 aa8.26□□□□□ -1.09
HMGB3P10-201ENST00000434734 MMRN1Q13201 1228 aa8.26□□□□□ -1.09
HMGB3P10-201ENST00000434734 CCDC102AQ96A19 550 aa8.26□□□□□ -1.09
HMGB3P10-201ENST00000434734 GOPCQ9HD26 462 aa8.26□□□□□ -1.09
HMGB3P10-201ENST00000434734 EMILIN3Q9NT22 766 aa8.26□□□□□ -1.09
HMGB3P10-201ENST00000434734 ARHGAP33O14559 1287 aa8.25□□□□□ -1.09
HMGB3P10-201ENST00000434734 LSM11P83369 360 aaKnown RBP eCLIP8.25□□□□□ -1.09
HMGB3P10-201ENST00000434734 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
HMGB3P10-201ENST00000434734 AMHR2Q16671 573 aa8.23□□□□□ -1.09
HMGB3P10-201ENST00000434734 FOSBP53539 338 aa8.22□□□□□ -1.09
HMGB3P10-201ENST00000434734 POTEEQ6S8J3 1075 aa8.22□□□□□ -1.09
HMGB3P10-201ENST00000434734 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
HMGB3P10-201ENST00000434734 KCNH8Q96L42 1107 aa8.22□□□□□ -1.09
HMGB3P10-201ENST00000434734 PCMTD1Q96MG8 357 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P10-201ENST00000434734 FAM177A1Q8N128 213 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P10-201ENST00000434734 TK2O00142 265 aa8.2□□□□□ -1.1
HMGB3P10-201ENST00000434734 ANKRD13DQ6ZTN6 518 aa8.2□□□□□ -1.1
HMGB3P10-201ENST00000434734 BCL2L12Q9HB09 334 aa8.2□□□□□ -1.1
HMGB3P10-201ENST00000434734 AXIN2Q9Y2T1 843 aa8.19□□□□□ -1.1
HMGB3P10-201ENST00000434734 MINK1Q8N4C8 1332 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P10-201ENST00000434734 DPYSL4O14531 572 aa8.18□□□□□ -1.1
HMGB3P10-201ENST00000434734 RSPH4AQ5TD94 716 aa8.18□□□□□ -1.1
HMGB3P10-201ENST00000434734 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
HMGB3P10-201ENST00000434734 MYT1LQ9UL68 1186 aa8.18□□□□□ -1.1
HMGB3P10-201ENST00000434734 SPDYE16A6NNV3 312 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P10-201ENST00000434734 MS4A1P11836 297 aa8.17□□□□□ -1.1
HMGB3P10-201ENST00000434734 MAP2K5Q13163 448 aa8.17□□□□□ -1.1
HMGB3P10-201ENST00000434734 COG6Q9Y2V7 657 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms