RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 ACIN1Q9UKV3 1341 aaKnown RBP34.55■■■■□ 3.12
SMARCAL1-208ENST00000434435 KIF3BO15066 747 aa34.52■■■■□ 3.12
SMARCAL1-208ENST00000434435 MROH1Q8NDA8 1641 aa34.52■■■■□ 3.12
SMARCAL1-208ENST00000434435 PRDM15P57071 1507 aaPredicted RBP34.51■■■■□ 3.12
SMARCAL1-208ENST00000434435 KDM5DQ9BY66 1539 aa34.49■■■■□ 3.11
SMARCAL1-208ENST00000434435 IQGAP3Q86VI3 1631 aa34.47■■■■□ 3.11
SMARCAL1-208ENST00000434435 TRIM52Q96A61 297 aa34.43■■■■□ 3.1
SMARCAL1-208ENST00000434435 CEP152O94986 1710 aa34.43■■■■□ 3.1
SMARCAL1-208ENST00000434435 ZC3H13Q5T200 1668 aaKnown RBP34.42■■■■□ 3.1
SMARCAL1-208ENST00000434435 VWDEQ8N2E2 1590 aa34.41■■■■□ 3.1
SMARCAL1-208ENST00000434435 ARID4BQ4LE39 1312 aaPredicted RBP34.4■■■■□ 3.1
SMARCAL1-208ENST00000434435 NUP155O75694 1391 aa34.39■■■■□ 3.1
SMARCAL1-208ENST00000434435 KANK1Q14678 1352 aa34.39■■■■□ 3.1
SMARCAL1-208ENST00000434435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.38■■■■□ 3.096e-7■■■■□ 22.5
SMARCAL1-208ENST00000434435 FAM135AQ9P2D6 1515 aa34.38■■■■□ 3.09
SMARCAL1-208ENST00000434435 GGT6Q6P531 493 aa34.37■■■■□ 3.09
SMARCAL1-208ENST00000434435 PZPP20742 1482 aa34.35■■■■□ 3.09
SMARCAL1-208ENST00000434435 TET3O43151 1660 aa34.35■■■■□ 3.09
SMARCAL1-208ENST00000434435 CLTCQ00610 1675 aaKnown RBP34.31■■■■□ 3.08
SMARCAL1-208ENST00000434435 FER1L4A9Z1Z3 1794 aa34.31■■■■□ 3.08
SMARCAL1-208ENST00000434435 ABCC3O15438 1527 aa34.3■■■■□ 3.08
SMARCAL1-208ENST00000434435 LMTK2Q8IWU2 1503 aa34.3■■■■□ 3.08
SMARCAL1-208ENST00000434435 CAMSAP1Q5T5Y3 1602 aa34.3■■■■□ 3.08
SMARCAL1-208ENST00000434435 MLECQ14165 292 aa34.29■■■■□ 3.08
SMARCAL1-208ENST00000434435 PPP6R1Q9UPN7 881 aa34.26■■■■□ 3.08
SMARCAL1-208ENST00000434435 DHX57Q6P158 1386 aaKnown RBP34.25■■■■□ 3.07
SMARCAL1-208ENST00000434435 SLC4A1APQ9BWU0 796 aaKnown RBP34.24■■■■□ 3.07
SMARCAL1-208ENST00000434435 E9PCH4 1651 aa34.24■■■■□ 3.07
SMARCAL1-208ENST00000434435 EFCAB6Q5THR3 1501 aa34.24■■■■□ 3.07
SMARCAL1-208ENST00000434435 MROH2AA6NES4 1674 aa34.23■■■■□ 3.07
SMARCAL1-208ENST00000434435 MPHOSPH9Q99550 1183 aa34.23■■■■□ 3.07
SMARCAL1-208ENST00000434435 WASHC2CQ9Y4E1 1318 aa34.23■■■■□ 3.07
SMARCAL1-208ENST00000434435 ADAMTSL3P82987 1691 aa34.21■■■■□ 3.07
SMARCAL1-208ENST00000434435 MADDQ8WXG6 1647 aa34.18■■■■□ 3.06
SMARCAL1-208ENST00000434435 CNTLNQ9NXG0 1405 aa34.17■■■■□ 3.06
SMARCAL1-208ENST00000434435 ESF1Q9H501 851 aaKnown RBP34.16■■■■□ 3.06
SMARCAL1-208ENST00000434435 CFAP65Q6ZU64 1925 aaKnown RBP34.15■■■■□ 3.06
SMARCAL1-208ENST00000434435 RIMS1Q86UR5 1692 aaKnown RBP34.14■■■■□ 3.06
SMARCAL1-208ENST00000434435 SPHKAPQ2M3C7 1700 aa34.13■■■■□ 3.05
SMARCAL1-208ENST00000434435 PKD2Q13563 968 aa34.12■■■■□ 3.05
SMARCAL1-208ENST00000434435 RPRD2Q5VT52 1461 aaKnown RBP34.11■■■■□ 3.05
SMARCAL1-208ENST00000434435 ARHGAP31Q2M1Z3 1444 aa34.1■■■■□ 3.05
SMARCAL1-208ENST00000434435 CCER1Q8TC90 406 aaPredicted RBP34.08■■■■□ 3.05
SMARCAL1-208ENST00000434435 C3P01024 1663 aa34.07■■■■□ 3.04
SMARCAL1-208ENST00000434435 PREX1Q8TCU6 1659 aa34.07■■■■□ 3.04
SMARCAL1-208ENST00000434435 NPATQ14207 1427 aa34.06■■■■□ 3.04
SMARCAL1-208ENST00000434435 FOXD1Q16676 465 aa34.03■■■■□ 3.04
SMARCAL1-208ENST00000434435 ZMYM3Q14202 1370 aa33.99■■■■□ 3.03
SMARCAL1-208ENST00000434435 TRPM2O94759 1503 aa33.99■■■■□ 3.03
SMARCAL1-208ENST00000434435 CLSPNQ9HAW4 1339 aa33.98■■■■□ 3.03
SMARCAL1-208ENST00000434435 ANKRD30BQ9BXX2 1392 aa33.96■■■■□ 3.03
SMARCAL1-208ENST00000434435 ERVK-7P63135 1459 aa33.95■■■■□ 3.03
SMARCAL1-208ENST00000434435 SPATA31D1Q6ZQQ2 1576 aa33.95■■■■□ 3.03
SMARCAL1-208ENST00000434435 PTPRTO14522 1441 aa33.95■■■■□ 3.02
SMARCAL1-208ENST00000434435 NOS1P29475 1434 aa33.92■■■■□ 3.02
SMARCAL1-208ENST00000434435 SYNMO15061 1565 aa33.92■■■■□ 3.02
SMARCAL1-208ENST00000434435 PLA2R1Q13018 1463 aa33.91■■■■□ 3.02
SMARCAL1-208ENST00000434435 CLTCL1P53675 1640 aa33.89■■■■□ 3.02
SMARCAL1-208ENST00000434435 PIK3C2BO00750 1634 aa33.87■■■■□ 3.01
SMARCAL1-208ENST00000434435 KIF1BO60333 1816 aa33.86■■■■□ 3.01
SMARCAL1-208ENST00000434435 CCDC144AA2RUR9 1427 aa33.86■■■■□ 3.01
SMARCAL1-208ENST00000434435 PTPRMP28827 1452 aa33.85■■■■□ 3.01
SMARCAL1-208ENST00000434435 FBXO31Q5XUX0 539 aaPredicted RBP33.83■■■■□ 3.01
SMARCAL1-208ENST00000434435 UGGT1Q9NYU2 1555 aa33.82■■■■□ 3
SMARCAL1-208ENST00000434435 CEBPAP49715 358 aaPredicted RBP33.8■■■■□ 3
SMARCAL1-208ENST00000434435 TNRQ92752 1358 aa33.78■■■■□ 3
SMARCAL1-208ENST00000434435 PLPPR3Q6T4P5 718 aa33.77■■■■□ 3
SMARCAL1-208ENST00000434435 SETD1BQ9UPS6 1966 aaKnown RBP33.77■■■■□ 3
SMARCAL1-208ENST00000434435 SIN3AQ96ST3 1273 aa33.76■■■□□ 2.99
SMARCAL1-208ENST00000434435 MYO3AQ8NEV4 1616 aa33.75■■■□□ 2.99
SMARCAL1-208ENST00000434435 KDM4FA0A1W2PPD8 638 aa33.75■■■□□ 2.99
SMARCAL1-208ENST00000434435 MYO5BQ9ULV0 1848 aa33.72■■■□□ 2.99
SMARCAL1-208ENST00000434435 SLC52A1Q9NWF4 448 aa33.72■■■□□ 2.99
SMARCAL1-208ENST00000434435 NEUROD1Q13562 356 aa33.71■■■□□ 2.99
SMARCAL1-208ENST00000434435 NEURL4Q96JN8 1562 aa33.7■■■□□ 2.99
SMARCAL1-208ENST00000434435 NLRP1Q9C000 1473 aa33.69■■■□□ 2.98
SMARCAL1-208ENST00000434435 KDM5AP29375 1690 aaKnown RBP33.69■■■□□ 2.98
SMARCAL1-208ENST00000434435 ADGRB3O60242 1522 aa33.68■■■□□ 2.98
SMARCAL1-208ENST00000434435 TMEM131LA2VDJ0 1609 aa33.66■■■□□ 2.98
SMARCAL1-208ENST00000434435 ZNF142P52746 1687 aaPredicted RBP33.66■■■□□ 2.98
SMARCAL1-208ENST00000434435 IDI1Q13907 227 aa33.64■■■□□ 2.98
SMARCAL1-208ENST00000434435 UBR1Q8IWV7 1749 aa33.64■■■□□ 2.98
SMARCAL1-208ENST00000434435 SPATA31E1Q6ZUB1 1445 aa33.62■■■□□ 2.97
SMARCAL1-208ENST00000434435 TONSLQ96HA7 1378 aa33.6■■■□□ 2.97
SMARCAL1-208ENST00000434435 CEP170BQ9Y4F5 1589 aaPredicted RBP33.6■■■□□ 2.97
SMARCAL1-208ENST00000434435 IFT172Q9UG01 1749 aa33.59■■■□□ 2.97
SMARCAL1-208ENST00000434435 A2ML1A8K2U0 1454 aa33.57■■■□□ 2.97
SMARCAL1-208ENST00000434435 CHGAP10645 457 aaKnown RBP33.57■■■□□ 2.96
SMARCAL1-208ENST00000434435 PPLO60437 1756 aa33.55■■■□□ 2.96
SMARCAL1-208ENST00000434435 STAG3Q9UJ98 1225 aa33.54■■■□□ 2.96
SMARCAL1-208ENST00000434435 UHRF1BP1Q6BDS2 1440 aa33.53■■■□□ 2.96
SMARCAL1-208ENST00000434435 TIMELESSQ9UNS1 1208 aa33.52■■■□□ 2.96
SMARCAL1-208ENST00000434435 RGL3Q3MIN7 710 aa33.5■■■□□ 2.95
SMARCAL1-208ENST00000434435 ZEB1P37275 1124 aaPredicted RBP33.48■■■□□ 2.95
SMARCAL1-208ENST00000434435 NEXMIFQ5QGS0 1516 aa33.47■■■□□ 2.95
SMARCAL1-208ENST00000434435 ZNF326Q5BKZ1 582 aaKnown RBP33.46■■■□□ 2.95
SMARCAL1-208ENST00000434435 L3MBTL2Q969R5 705 aa33.45■■■□□ 2.95
SMARCAL1-208ENST00000434435 RPGRIP1LQ68CZ1 1315 aa33.42■■■□□ 2.94
SMARCAL1-208ENST00000434435 MYOM2P54296 1465 aa33.39■■■□□ 2.94
SMARCAL1-208ENST00000434435 SLIT1O75093 1534 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms