RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 KDM5DQ9BY66 1539 aa34.45■■■■□ 3.1
SEMA3B-205ENST00000434030 EIF2AK4Q9P2K8 1649 aaKnown RBP34.44■■■■□ 3.1
SEMA3B-205ENST00000434030 RNF17Q9BXT8 1623 aaKnown RBP34.44■■■■□ 3.1
SEMA3B-205ENST00000434030 SHANK2Q9UPX8 1470 aa34.43■■■■□ 3.1
SEMA3B-205ENST00000434030 MYO3AQ8NEV4 1616 aa34.42■■■■□ 3.1
SEMA3B-205ENST00000434030 DAPK1P53355 1430 aa34.42■■■■□ 3.1
SEMA3B-205ENST00000434030 WASHC2CQ9Y4E1 1318 aa34.42■■■■□ 3.1
SEMA3B-205ENST00000434030 DUOX2Q9NRD8 1548 aa34.4■■■■□ 3.1
SEMA3B-205ENST00000434030 ZNF142P52746 1687 aaPredicted RBP34.39■■■■□ 3.1
SEMA3B-205ENST00000434030 DMRT2Q9Y5R5 561 aa34.37■■■■□ 3.09
SEMA3B-205ENST00000434030 PZPP20742 1482 aa34.34■■■■□ 3.09
SEMA3B-205ENST00000434030 KIF15Q9NS87 1388 aa34.34■■■■□ 3.09
SEMA3B-205ENST00000434030 CAMSAP1Q5T5Y3 1602 aa34.33■■■■□ 3.09
SEMA3B-205ENST00000434030 CEP170BQ9Y4F5 1589 aaPredicted RBP34.33■■■■□ 3.09
SEMA3B-205ENST00000434030 RRP7BPQ9NSQ0 103 aa34.33■■■■□ 3.09
SEMA3B-205ENST00000434030 ZC3H13Q5T200 1668 aaKnown RBP34.32■■■■□ 3.08
SEMA3B-205ENST00000434030 FBXO31Q5XUX0 539 aaPredicted RBP34.32■■■■□ 3.08
SEMA3B-205ENST00000434030 MROH1Q8NDA8 1641 aa34.32■■■■□ 3.08
SEMA3B-205ENST00000434030 NCOA1Q15788 1441 aa34.31■■■■□ 3.08
SEMA3B-205ENST00000434030 CEP152O94986 1710 aa34.29■■■■□ 3.08
SEMA3B-205ENST00000434030 ABCC3O15438 1527 aa34.29■■■■□ 3.08
SEMA3B-205ENST00000434030 CHIC2Q9UKJ5 165 aa34.28■■■■□ 3.08
SEMA3B-205ENST00000434030 CFAP65Q6ZU64 1925 aaKnown RBP34.28■■■■□ 3.08
SEMA3B-205ENST00000434030 FAM50AQ14320 339 aaKnown RBP34.27■■■■□ 3.08
SEMA3B-205ENST00000434030 PTPRTO14522 1441 aa34.27■■■■□ 3.08
SEMA3B-205ENST00000434030 ERBINQ96RT1 1412 aa34.27■■■■□ 3.08
SEMA3B-205ENST00000434030 TNRQ92752 1358 aa34.25■■■■□ 3.07
SEMA3B-205ENST00000434030 ANKRD30AQ9BXX3 1397 aa34.24■■■■□ 3.07
SEMA3B-205ENST00000434030 A2ML1A8K2U0 1454 aa34.24■■■■□ 3.07
SEMA3B-205ENST00000434030 FBXO41Q8TF61 875 aa34.23■■■■□ 3.07
SEMA3B-205ENST00000434030 PLA2R1Q13018 1463 aa34.2■■■■□ 3.06
SEMA3B-205ENST00000434030 PRDM15P57071 1507 aaPredicted RBP34.19■■■■□ 3.06
SEMA3B-205ENST00000434030 DEPDC5O75140 1603 aa34.19■■■■□ 3.06
SEMA3B-205ENST00000434030 NCKAP5LQ9HCH0 1330 aa34.18■■■■□ 3.06
SEMA3B-205ENST00000434030 ADGRL2O95490 1459 aa34.17■■■■□ 3.06
SEMA3B-205ENST00000434030 CERKQ8TCT0 537 aa34.17■■■■□ 3.06
SEMA3B-205ENST00000434030 PPARGC1BQ86YN6 1023 aaKnown RBP34.15■■■■□ 3.06
SEMA3B-205ENST00000434030 PKD2Q13563 968 aa34.14■■■■□ 3.06
SEMA3B-205ENST00000434030 SPATA31D1Q6ZQQ2 1576 aa34.14■■■■□ 3.06
SEMA3B-205ENST00000434030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.12■■■■□ 3.054e-7■■■■□ 20.2
SEMA3B-205ENST00000434030 NLRP1Q9C000 1473 aa34.12■■■■□ 3.05
SEMA3B-205ENST00000434030 ERVK-7P63135 1459 aa34.09■■■■□ 3.05
SEMA3B-205ENST00000434030 POLR1AO95602 1720 aaPredicted RBP34.07■■■■□ 3.05
SEMA3B-205ENST00000434030 UGGT1Q9NYU2 1555 aa34.06■■■■□ 3.04
SEMA3B-205ENST00000434030 ARHGAP31Q2M1Z3 1444 aa34.05■■■■□ 3.04
SEMA3B-205ENST00000434030 KANK1Q14678 1352 aa34.05■■■■□ 3.04
SEMA3B-205ENST00000434030 VWDEQ8N2E2 1590 aa34.03■■■■□ 3.04
SEMA3B-205ENST00000434030 THEMISQ8N1K5 641 aaPredicted RBP34.03■■■■□ 3.04
SEMA3B-205ENST00000434030 LTBP4Q8N2S1 1624 aa34.02■■■■□ 3.04
SEMA3B-205ENST00000434030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34■■■■□ 3.03
SEMA3B-205ENST00000434030 ANKRD50Q9ULJ7 1429 aa34■■■■□ 3.03
SEMA3B-205ENST00000434030 LMTK2Q8IWU2 1503 aa33.99■■■■□ 3.03
SEMA3B-205ENST00000434030 NEURL4Q96JN8 1562 aa33.97■■■■□ 3.03
SEMA3B-205ENST00000434030 UBR1Q8IWV7 1749 aa33.95■■■■□ 3.03
SEMA3B-205ENST00000434030 ANKLE2Q86XL3 938 aa33.94■■■■□ 3.02
SEMA3B-205ENST00000434030 ROCK1Q13464 1354 aa33.93■■■■□ 3.02
SEMA3B-205ENST00000434030 ZNF335Q9H4Z2 1342 aaPredicted RBP33.91■■■■□ 3.02
SEMA3B-205ENST00000434030 ITGAEP38570 1179 aa33.9■■■■□ 3.02
SEMA3B-205ENST00000434030 EFCAB6Q5THR3 1501 aa33.89■■■■□ 3.02
SEMA3B-205ENST00000434030 MED14O60244 1454 aa33.85■■■■□ 3.01
SEMA3B-205ENST00000434030 PIK3C2BO00750 1634 aa33.85■■■■□ 3.01
SEMA3B-205ENST00000434030 UNC13BO14795 1591 aa33.85■■■■□ 3.01
SEMA3B-205ENST00000434030 IQSEC2Q5JU85 1478 aa33.82■■■■□ 3.01
SEMA3B-205ENST00000434030 TET3O43151 1660 aa33.82■■■■□ 3
SEMA3B-205ENST00000434030 SYNMO15061 1565 aa33.81■■■■□ 3
SEMA3B-205ENST00000434030 IQGAP1P46940 1657 aa33.81■■■■□ 3
SEMA3B-205ENST00000434030 NPHP4O75161 1426 aaPredicted RBP33.81■■■■□ 3
SEMA3B-205ENST00000434030 RRBP1Q9P2E9 1410 aaKnown RBP33.81■■■■□ 3
SEMA3B-205ENST00000434030 GCC2Q8IWJ2 1684 aa33.8■■■■□ 3
SEMA3B-205ENST00000434030 NOS1P29475 1434 aa33.79■■■■□ 3
SEMA3B-205ENST00000434030 KDM5AP29375 1690 aaKnown RBP33.78■■■■□ 3
SEMA3B-205ENST00000434030 IDI1Q13907 227 aa33.77■■■■□ 3
SEMA3B-205ENST00000434030 RPRD2Q5VT52 1461 aaKnown RBP33.76■■■■□ 3
SEMA3B-205ENST00000434030 SLIT1O75093 1534 aa33.76■■■■□ 3
SEMA3B-205ENST00000434030 ARHGAP23Q9P227 1491 aa33.76■■■□□ 2.99
SEMA3B-205ENST00000434030 IQGAP3Q86VI3 1631 aa33.73■■■□□ 2.99
SEMA3B-205ENST00000434030 STAG3Q9UJ98 1225 aa33.72■■■□□ 2.99
SEMA3B-205ENST00000434030 SCAF11Q99590 1463 aaKnown RBP33.71■■■□□ 2.99
SEMA3B-205ENST00000434030 LTKP29376 864 aa33.71■■■□□ 2.99
SEMA3B-205ENST00000434030 E9PCH4 1651 aa33.71■■■□□ 2.99
SEMA3B-205ENST00000434030 TXNDC2Q86VQ3 553 aa33.69■■■□□ 2.98
SEMA3B-205ENST00000434030 SLC52A1Q9NWF4 448 aa33.68■■■□□ 2.98
SEMA3B-205ENST00000434030 TMEM2Q9UHN6 1383 aa33.67■■■□□ 2.98
SEMA3B-205ENST00000434030 CPS1P31327 1500 aa33.67■■■□□ 2.98
SEMA3B-205ENST00000434030 MYO5BQ9ULV0 1848 aa33.66■■■□□ 2.98
SEMA3B-205ENST00000434030 NUP155O75694 1391 aa33.65■■■□□ 2.98
SEMA3B-205ENST00000434030 EID1Q9Y6B2 187 aa33.65■■■□□ 2.98
SEMA3B-205ENST00000434030 STRCP1A6NGW2 1772 aa33.64■■■□□ 2.98
SEMA3B-205ENST00000434030 ADGRB3O60242 1522 aa33.63■■■□□ 2.97
SEMA3B-205ENST00000434030 NAIPQ13075 1403 aa33.55■■■□□ 2.96
SEMA3B-205ENST00000434030 UBAP1LF5GYI3 381 aa33.55■■■□□ 2.96
SEMA3B-205ENST00000434030 TMEM131LA2VDJ0 1609 aa33.54■■■□□ 2.96
SEMA3B-205ENST00000434030 SPHKAPQ2M3C7 1700 aa33.47■■■□□ 2.95
SEMA3B-205ENST00000434030 LRRC7Q96NW7 1537 aa33.46■■■□□ 2.95
SEMA3B-205ENST00000434030 HFM1A2PYH4 1435 aa33.45■■■□□ 2.94
SEMA3B-205ENST00000434030 ZFYVE9O95405 1425 aa33.45■■■□□ 2.94
SEMA3B-205ENST00000434030 CHGAP10645 457 aaKnown RBP33.43■■■□□ 2.94
SEMA3B-205ENST00000434030 RIMS2Q9UQ26 1411 aa33.42■■■□□ 2.94
SEMA3B-205ENST00000434030 XIRP1Q702N8 1843 aaKnown RBP33.4■■■□□ 2.94
SEMA3B-205ENST00000434030 TOM1O60784 492 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms