RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 GGT6Q6P531 493 aa29.13■■■□□ 2.25
RPUSD3-207ENST00000433555 KDM5DQ9BY66 1539 aa29.13■■■□□ 2.25
RPUSD3-207ENST00000433555 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
RPUSD3-207ENST00000433555 NCOA1Q15788 1441 aa29.12■■■□□ 2.25
RPUSD3-207ENST00000433555 ERBINQ96RT1 1412 aa29.12■■■□□ 2.25
RPUSD3-207ENST00000433555 CEP152O94986 1710 aa29.12■■■□□ 2.25
RPUSD3-207ENST00000433555 FAM135AQ9P2D6 1515 aa29.11■■■□□ 2.25
RPUSD3-207ENST00000433555 ANKRD30AQ9BXX3 1397 aa29.11■■■□□ 2.25
RPUSD3-207ENST00000433555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.11■■■□□ 2.25
RPUSD3-207ENST00000433555 LMTK3Q96Q04 1460 aa29.1■■■□□ 2.25
RPUSD3-207ENST00000433555 ZC3H13Q5T200 1668 aaKnown RBP29.1■■■□□ 2.25
RPUSD3-207ENST00000433555 RRP7BPQ9NSQ0 103 aa29.1■■■□□ 2.25
RPUSD3-207ENST00000433555 PRDM15P57071 1507 aaPredicted RBP29.09■■■□□ 2.25
RPUSD3-207ENST00000433555 ABCC3O15438 1527 aa29.06■■■□□ 2.24
RPUSD3-207ENST00000433555 ESF1Q9H501 851 aaKnown RBP29.04■■■□□ 2.24
RPUSD3-207ENST00000433555 ZMYM3Q14202 1370 aa29.02■■■□□ 2.24
RPUSD3-207ENST00000433555 CAMSAP1Q5T5Y3 1602 aa29.02■■■□□ 2.24
RPUSD3-207ENST00000433555 MYO3AQ8NEV4 1616 aa29■■■□□ 2.23
RPUSD3-207ENST00000433555 ITGAEP38570 1179 aa28.98■■■□□ 2.23
RPUSD3-207ENST00000433555 PPP6R1Q9UPN7 881 aa28.98■■■□□ 2.23
RPUSD3-207ENST00000433555 ROCK1Q13464 1354 aa28.98■■■□□ 2.23
RPUSD3-207ENST00000433555 SETD1BQ9UPS6 1966 aaKnown RBP28.97■■■□□ 2.23
RPUSD3-207ENST00000433555 VWDEQ8N2E2 1590 aa28.97■■■□□ 2.23
RPUSD3-207ENST00000433555 NPATQ14207 1427 aa28.96■■■□□ 2.23
RPUSD3-207ENST00000433555 PZPP20742 1482 aa28.96■■■□□ 2.23
RPUSD3-207ENST00000433555 ANKRD50Q9ULJ7 1429 aa28.95■■■□□ 2.23
RPUSD3-207ENST00000433555 UNC13BO14795 1591 aa28.95■■■□□ 2.22
RPUSD3-207ENST00000433555 ZNF142P52746 1687 aaPredicted RBP28.94■■■□□ 2.22
RPUSD3-207ENST00000433555 GCC2Q8IWJ2 1684 aa28.94■■■□□ 2.22
RPUSD3-207ENST00000433555 WASHC2CQ9Y4E1 1318 aa28.92■■■□□ 2.22
RPUSD3-207ENST00000433555 UHRF1BP1Q6BDS2 1440 aa28.91■■■□□ 2.22
RPUSD3-207ENST00000433555 LMTK2Q8IWU2 1503 aa28.87■■■□□ 2.21
RPUSD3-207ENST00000433555 HSPA2P54652 639 aa28.86■■■□□ 2.21
RPUSD3-207ENST00000433555 SPATA31D1Q6ZQQ2 1576 aa28.86■■■□□ 2.21
RPUSD3-207ENST00000433555 CEP170BQ9Y4F5 1589 aaPredicted RBP28.86■■■□□ 2.21
RPUSD3-207ENST00000433555 CFAP65Q6ZU64 1925 aaKnown RBP28.86■■■□□ 2.21
RPUSD3-207ENST00000433555 EFCAB6Q5THR3 1501 aa28.84■■■□□ 2.21
RPUSD3-207ENST00000433555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.83■■■□□ 2.21
RPUSD3-207ENST00000433555 ERVK-7P63135 1459 aa28.83■■■□□ 2.21
RPUSD3-207ENST00000433555 FBXO31Q5XUX0 539 aaPredicted RBP28.82■■■□□ 2.2
RPUSD3-207ENST00000433555 TET3O43151 1660 aa28.81■■■□□ 2.2
RPUSD3-207ENST00000433555 STRCQ7RTU9 1775 aa28.8■■■□□ 2.2
RPUSD3-207ENST00000433555 IQGAP3Q86VI3 1631 aa28.8■■■□□ 2.2
RPUSD3-207ENST00000433555 TNRQ92752 1358 aa28.79■■■□□ 2.2
RPUSD3-207ENST00000433555 NAIPQ13075 1403 aa28.78■■■□□ 2.2
RPUSD3-207ENST00000433555 KANK1Q14678 1352 aa28.78■■■□□ 2.2
RPUSD3-207ENST00000433555 ARHGAP31Q2M1Z3 1444 aa28.77■■■□□ 2.2
RPUSD3-207ENST00000433555 A2ML1A8K2U0 1454 aa28.74■■■□□ 2.19
RPUSD3-207ENST00000433555 HFM1A2PYH4 1435 aa28.74■■■□□ 2.19
RPUSD3-207ENST00000433555 E9PCH4 1651 aa28.73■■■□□ 2.19
RPUSD3-207ENST00000433555 SYNMO15061 1565 aa28.71■■■□□ 2.19
RPUSD3-207ENST00000433555 NLRP1Q9C000 1473 aa28.68■■■□□ 2.18
RPUSD3-207ENST00000433555 UBR1Q8IWV7 1749 aa28.66■■■□□ 2.18
RPUSD3-207ENST00000433555 PIK3C2BO00750 1634 aa28.65■■■□□ 2.18
RPUSD3-207ENST00000433555 POLR1AO95602 1720 aaPredicted RBP28.63■■■□□ 2.17
RPUSD3-207ENST00000433555 RPRD2Q5VT52 1461 aaKnown RBP28.63■■■□□ 2.17
RPUSD3-207ENST00000433555 UGGT1Q9NYU2 1555 aa28.62■■■□□ 2.17
RPUSD3-207ENST00000433555 NOS1P29475 1434 aa28.62■■■□□ 2.17
RPUSD3-207ENST00000433555 PLA2R1Q13018 1463 aa28.62■■■□□ 2.17
RPUSD3-207ENST00000433555 NUP155O75694 1391 aa28.62■■■□□ 2.17
RPUSD3-207ENST00000433555 NEURL4Q96JN8 1562 aa28.58■■■□□ 2.17
RPUSD3-207ENST00000433555 SPHKAPQ2M3C7 1700 aa28.55■■■□□ 2.16
RPUSD3-207ENST00000433555 MYO5BQ9ULV0 1848 aa28.55■■■□□ 2.16
RPUSD3-207ENST00000433555 KDM5AP29375 1690 aaKnown RBP28.54■■■□□ 2.16
RPUSD3-207ENST00000433555 ADGRB3O60242 1522 aa28.52■■■□□ 2.16
RPUSD3-207ENST00000433555 NCKAP5LQ9HCH0 1330 aa28.48■■■□□ 2.15
RPUSD3-207ENST00000433555 PTPRTO14522 1441 aa28.47■■■□□ 2.15
RPUSD3-207ENST00000433555 ARHGAP23Q9P227 1491 aa28.45■■■□□ 2.14
RPUSD3-207ENST00000433555 SLIT1O75093 1534 aa28.44■■■□□ 2.14
RPUSD3-207ENST00000433555 TMEM131LA2VDJ0 1609 aa28.44■■■□□ 2.14
RPUSD3-207ENST00000433555 IDI1Q13907 227 aa28.43■■■□□ 2.14
RPUSD3-207ENST00000433555 SETD5Q9C0A6 1442 aa28.43■■■□□ 2.14
RPUSD3-207ENST00000433555 IQGAP1P46940 1657 aa28.42■■■□□ 2.14
RPUSD3-207ENST00000433555 CLTCL1P53675 1640 aa28.41■■■□□ 2.14
RPUSD3-207ENST00000433555 TRPM2O94759 1503 aa28.4■■■□□ 2.14
RPUSD3-207ENST00000433555 THEMISQ8N1K5 641 aaPredicted RBP28.39■■■□□ 2.14
RPUSD3-207ENST00000433555 TRIM52Q96A61 297 aa28.39■■■□□ 2.14
RPUSD3-207ENST00000433555 PKD2Q13563 968 aa28.38■■■□□ 2.13
RPUSD3-207ENST00000433555 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
RPUSD3-207ENST00000433555 MED14O60244 1454 aa28.37■■■□□ 2.13
RPUSD3-207ENST00000433555 SCAF11Q99590 1463 aaKnown RBP28.35■■■□□ 2.13
RPUSD3-207ENST00000433555 SLC52A1Q9NWF4 448 aa28.34■■■□□ 2.13
RPUSD3-207ENST00000433555 DMRT2Q9Y5R5 561 aa28.34■■■□□ 2.13
RPUSD3-207ENST00000433555 TMEM2Q9UHN6 1383 aa28.33■■■□□ 2.13
RPUSD3-207ENST00000433555 NPHP4O75161 1426 aaPredicted RBP28.33■■■□□ 2.13
RPUSD3-207ENST00000433555 LTBP4Q8N2S1 1624 aa28.32■■■□□ 2.12
RPUSD3-207ENST00000433555 ANKLE2Q86XL3 938 aa28.3■■■□□ 2.12
RPUSD3-207ENST00000433555 SLC4A1APQ9BWU0 796 aaKnown RBP28.29■■■□□ 2.12
RPUSD3-207ENST00000433555 ZFYVE9O95405 1425 aa28.28■■■□□ 2.12
RPUSD3-207ENST00000433555 KIF1BO60333 1816 aa28.28■■■□□ 2.12
RPUSD3-207ENST00000433555 STAG3Q9UJ98 1225 aa28.28■■■□□ 2.12
RPUSD3-207ENST00000433555 LTKP29376 864 aa28.27■■■□□ 2.12
RPUSD3-207ENST00000433555 STRCP1A6NGW2 1772 aa28.25■■■□□ 2.11
RPUSD3-207ENST00000433555 FOXD1Q16676 465 aa28.24■■■□□ 2.11
RPUSD3-207ENST00000433555 ZNF335Q9H4Z2 1342 aaPredicted RBP28.22■■■□□ 2.11
RPUSD3-207ENST00000433555 RIMS2Q9UQ26 1411 aa28.22■■■□□ 2.11
RPUSD3-207ENST00000433555 TXNDC2Q86VQ3 553 aa28.21■■■□□ 2.11
RPUSD3-207ENST00000433555 MPHOSPH9Q99550 1183 aa28.21■■■□□ 2.11
RPUSD3-207ENST00000433555 CHGAP10645 457 aaKnown RBP28.19■■■□□ 2.1
RPUSD3-207ENST00000433555 NEXMIFQ5QGS0 1516 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms