RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 AGLP35573 1532 aa22.95■■□□□ 1.26
CNOT9-205ENST00000433439 SETD5Q9C0A6 1442 aa22.93■■□□□ 1.26
CNOT9-205ENST00000433439 EIF2AK4Q9P2K8 1649 aaKnown RBP22.93■■□□□ 1.26
CNOT9-205ENST00000433439 TRIM52Q96A61 297 aa22.89■■□□□ 1.25
CNOT9-205ENST00000433439 RAB3GAP2Q9H2M9 1393 aa22.89■■□□□ 1.25
CNOT9-205ENST00000433439 ESF1Q9H501 851 aaKnown RBP22.88■■□□□ 1.25
CNOT9-205ENST00000433439 BCORL1Q5H9F3 1711 aa22.88■■□□□ 1.25
CNOT9-205ENST00000433439 RNF17Q9BXT8 1623 aaKnown RBP22.85■■□□□ 1.25
CNOT9-205ENST00000433439 KANK1Q14678 1352 aa22.84■■□□□ 1.25
CNOT9-205ENST00000433439 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
CNOT9-205ENST00000433439 MROH1Q8NDA8 1641 aa22.82■■□□□ 1.24
CNOT9-205ENST00000433439 NUP155O75694 1391 aa22.82■■□□□ 1.24
CNOT9-205ENST00000433439 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
CNOT9-205ENST00000433439 UNC13BO14795 1591 aa22.81■■□□□ 1.24
CNOT9-205ENST00000433439 LMTK3Q96Q04 1460 aa22.81■■□□□ 1.24
CNOT9-205ENST00000433439 DEPDC5O75140 1603 aa22.81■■□□□ 1.24
CNOT9-205ENST00000433439 MADDQ8WXG6 1647 aa22.79■■□□□ 1.24
CNOT9-205ENST00000433439 FER1L4A9Z1Z3 1794 aa22.79■■□□□ 1.24
CNOT9-205ENST00000433439 PRDM15P57071 1507 aaPredicted RBP22.79■■□□□ 1.24
CNOT9-205ENST00000433439 ADAMTSL3P82987 1691 aa22.78■■□□□ 1.24
CNOT9-205ENST00000433439 CEP152O94986 1710 aa22.78■■□□□ 1.24
CNOT9-205ENST00000433439 CLTCQ00610 1675 aaKnown RBP22.77■■□□□ 1.24
CNOT9-205ENST00000433439 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
CNOT9-205ENST00000433439 KDM5DQ9BY66 1539 aa22.77■■□□□ 1.24
CNOT9-205ENST00000433439 RIMS1Q86UR5 1692 aaKnown RBP22.76■■□□□ 1.23
CNOT9-205ENST00000433439 ABCC3O15438 1527 aa22.74■■□□□ 1.23
CNOT9-205ENST00000433439 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
CNOT9-205ENST00000433439 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
CNOT9-205ENST00000433439 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
CNOT9-205ENST00000433439 VWDEQ8N2E2 1590 aa22.72■■□□□ 1.23
CNOT9-205ENST00000433439 IQGAP3Q86VI3 1631 aa22.71■■□□□ 1.23
CNOT9-205ENST00000433439 ZC3H13Q5T200 1668 aaKnown RBP22.71■■□□□ 1.23
CNOT9-205ENST00000433439 HRCP23327 699 aa22.71■■□□□ 1.23
CNOT9-205ENST00000433439 CEBPAP49715 358 aaPredicted RBP22.71■■□□□ 1.23
CNOT9-205ENST00000433439 ACIN1Q9UKV3 1341 aaKnown RBP22.7■■□□□ 1.22
CNOT9-205ENST00000433439 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
CNOT9-205ENST00000433439 ZMYM3Q14202 1370 aa22.69■■□□□ 1.22
CNOT9-205ENST00000433439 PZPP20742 1482 aa22.68■■□□□ 1.22
CNOT9-205ENST00000433439 MPHOSPH9Q99550 1183 aa22.68■■□□□ 1.22
CNOT9-205ENST00000433439 TET3O43151 1660 aa22.66■■□□□ 1.22
CNOT9-205ENST00000433439 PKD2Q13563 968 aa22.66■■□□□ 1.22
CNOT9-205ENST00000433439 LMTK2Q8IWU2 1503 aa22.66■■□□□ 1.22
CNOT9-205ENST00000433439 MROH2AA6NES4 1674 aa22.65■■□□□ 1.22
CNOT9-205ENST00000433439 FOXD1Q16676 465 aa22.64■■□□□ 1.21
CNOT9-205ENST00000433439 PTPRMP28827 1452 aa22.64■■□□□ 1.21
CNOT9-205ENST00000433439 CFAP65Q6ZU64 1925 aaKnown RBP22.64■■□□□ 1.21
CNOT9-205ENST00000433439 C3P01024 1663 aa22.64■■□□□ 1.21
CNOT9-205ENST00000433439 EFCAB6Q5THR3 1501 aa22.63■■□□□ 1.21
CNOT9-205ENST00000433439 FBXO31Q5XUX0 539 aaPredicted RBP22.63■■□□□ 1.21
CNOT9-205ENST00000433439 SOCS7O14512 581 aa22.62■■□□□ 1.21
CNOT9-205ENST00000433439 NPATQ14207 1427 aa22.62■■□□□ 1.21
CNOT9-205ENST00000433439 E9PCH4 1651 aa22.61■■□□□ 1.21
CNOT9-205ENST00000433439 ARHGAP31Q2M1Z3 1444 aa22.57■■□□□ 1.2
CNOT9-205ENST00000433439 ILDR2Q71H61 639 aa22.57■■□□□ 1.2
CNOT9-205ENST00000433439 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
CNOT9-205ENST00000433439 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
CNOT9-205ENST00000433439 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
CNOT9-205ENST00000433439 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
CNOT9-205ENST00000433439 TNRQ92752 1358 aa22.51■■□□□ 1.19
CNOT9-205ENST00000433439 SPATA31D1Q6ZQQ2 1576 aa22.5■■□□□ 1.19
CNOT9-205ENST00000433439 SPHKAPQ2M3C7 1700 aa22.49■■□□□ 1.19
CNOT9-205ENST00000433439 NOS1P29475 1434 aa22.48■■□□□ 1.19
CNOT9-205ENST00000433439 DISP3Q9P2K9 1392 aa22.48■■□□□ 1.19
CNOT9-205ENST00000433439 SYNMO15061 1565 aa22.46■■□□□ 1.19
CNOT9-205ENST00000433439 UGGT1Q9NYU2 1555 aa22.45■■□□□ 1.18
CNOT9-205ENST00000433439 PTPRTO14522 1441 aa22.44■■□□□ 1.18
CNOT9-205ENST00000433439 CHGAP10645 457 aaKnown RBP22.44■■□□□ 1.18
CNOT9-205ENST00000433439 PLA2R1Q13018 1463 aa22.44■■□□□ 1.18
CNOT9-205ENST00000433439 CCER1Q8TC90 406 aaPredicted RBP22.44■■□□□ 1.18
CNOT9-205ENST00000433439 IDI1Q13907 227 aa22.43■■□□□ 1.18
CNOT9-205ENST00000433439 TRPM2O94759 1503 aa22.42■■□□□ 1.18
CNOT9-205ENST00000433439 STAG3Q9UJ98 1225 aa22.42■■□□□ 1.18
CNOT9-205ENST00000433439 ANKRD30BQ9BXX2 1392 aa22.41■■□□□ 1.18
CNOT9-205ENST00000433439 MYO3AQ8NEV4 1616 aa22.41■■□□□ 1.18
CNOT9-205ENST00000433439 SETD1BQ9UPS6 1966 aaKnown RBP22.41■■□□□ 1.18
CNOT9-205ENST00000433439 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
CNOT9-205ENST00000433439 UHRF1BP1Q6BDS2 1440 aa22.4■■□□□ 1.18
CNOT9-205ENST00000433439 SLC52A1Q9NWF4 448 aa22.4■■□□□ 1.18
CNOT9-205ENST00000433439 CLTCL1P53675 1640 aa22.39■■□□□ 1.18
CNOT9-205ENST00000433439 NLRP1Q9C000 1473 aa22.38■■□□□ 1.17
CNOT9-205ENST00000433439 PIK3C2BO00750 1634 aa22.37■■□□□ 1.17
CNOT9-205ENST00000433439 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
CNOT9-205ENST00000433439 SIN3AQ96ST3 1273 aa22.36■■□□□ 1.17
CNOT9-205ENST00000433439 CEP170BQ9Y4F5 1589 aaPredicted RBP22.35■■□□□ 1.17
CNOT9-205ENST00000433439 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
CNOT9-205ENST00000433439 CERKQ8TCT0 537 aa22.34■■□□□ 1.17
CNOT9-205ENST00000433439 RGL3Q3MIN7 710 aa22.32■■□□□ 1.16
CNOT9-205ENST00000433439 ZNF326Q5BKZ1 582 aaKnown RBP22.32■■□□□ 1.16
CNOT9-205ENST00000433439 KIF1BO60333 1816 aa22.31■■□□□ 1.16
CNOT9-205ENST00000433439 HSPA2P54652 639 aa22.3■■□□□ 1.16
CNOT9-205ENST00000433439 ADGRB3O60242 1522 aa22.3■■□□□ 1.16
CNOT9-205ENST00000433439 ZNF142P52746 1687 aaPredicted RBP22.3■■□□□ 1.16
CNOT9-205ENST00000433439 MYO5BQ9ULV0 1848 aa22.29■■□□□ 1.16
CNOT9-205ENST00000433439 UBR1Q8IWV7 1749 aa22.28■■□□□ 1.16
CNOT9-205ENST00000433439 THEMISQ8N1K5 641 aaPredicted RBP22.28■■□□□ 1.16
CNOT9-205ENST00000433439 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
CNOT9-205ENST00000433439 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
CNOT9-205ENST00000433439 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
CNOT9-205ENST00000433439 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
CNOT9-205ENST00000433439 SPATA31E1Q6ZUB1 1445 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms