RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 NUP155O75694 1391 aa39.04■■■■□ 3.84
TMEM248-205ENST00000433271 BCORL1Q5H9F3 1711 aa39.01■■■■□ 3.84
TMEM248-205ENST00000433271 KDM5DQ9BY66 1539 aa39.01■■■■□ 3.84
TMEM248-205ENST00000433271 MPHOSPH9Q99550 1183 aa39■■■■□ 3.83
TMEM248-205ENST00000433271 DEPDC5O75140 1603 aa38.99■■■■□ 3.83
TMEM248-205ENST00000433271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.98■■■■□ 3.83
TMEM248-205ENST00000433271 PZPP20742 1482 aa38.96■■■■□ 3.83
TMEM248-205ENST00000433271 AGLP35573 1532 aa38.95■■■■□ 3.83
TMEM248-205ENST00000433271 SLC4A1APQ9BWU0 796 aaKnown RBP38.95■■■■□ 3.83
TMEM248-205ENST00000433271 RNF17Q9BXT8 1623 aaKnown RBP38.94■■■■□ 3.82
TMEM248-205ENST00000433271 PRDM15P57071 1507 aaPredicted RBP38.91■■■■□ 3.82
TMEM248-205ENST00000433271 FAM135AQ9P2D6 1515 aa38.9■■■■□ 3.82
TMEM248-205ENST00000433271 KANK1Q14678 1352 aa38.9■■■■□ 3.82
TMEM248-205ENST00000433271 IQGAP3Q86VI3 1631 aa38.9■■■■□ 3.82
TMEM248-205ENST00000433271 MROH1Q8NDA8 1641 aa38.9■■■■□ 3.82
TMEM248-205ENST00000433271 CLSPNQ9HAW4 1339 aa38.88■■■■□ 3.82
TMEM248-205ENST00000433271 GGT6Q6P531 493 aa38.88■■■■□ 3.81
TMEM248-205ENST00000433271 VWDEQ8N2E2 1590 aa38.85■■■■□ 3.81
TMEM248-205ENST00000433271 SIGLEC1Q9BZZ2 1709 aa38.84■■■■□ 3.81
TMEM248-205ENST00000433271 PKD2Q13563 968 aa38.81■■■■□ 3.8
TMEM248-205ENST00000433271 PPP6R1Q9UPN7 881 aa38.75■■■■□ 3.79
TMEM248-205ENST00000433271 ARID4BQ4LE39 1312 aaPredicted RBP38.75■■■■□ 3.79
TMEM248-205ENST00000433271 LMTK2Q8IWU2 1503 aa38.74■■■■□ 3.79
TMEM248-205ENST00000433271 WASHC2CQ9Y4E1 1318 aa38.73■■■■□ 3.79
TMEM248-205ENST00000433271 FOXD1Q16676 465 aa38.73■■■■□ 3.79
TMEM248-205ENST00000433271 TET3O43151 1660 aa38.7■■■■□ 3.79
TMEM248-205ENST00000433271 ABCC3O15438 1527 aa38.68■■■■□ 3.78
TMEM248-205ENST00000433271 MLECQ14165 292 aa38.66■■■■□ 3.78
TMEM248-205ENST00000433271 ANKRD30BQ9BXX2 1392 aa38.65■■■■□ 3.78
TMEM248-205ENST00000433271 CEP152O94986 1710 aa38.65■■■■□ 3.78
TMEM248-205ENST00000433271 ZC3H13Q5T200 1668 aaKnown RBP38.64■■■■□ 3.78
TMEM248-205ENST00000433271 EFCAB6Q5THR3 1501 aa38.61■■■■□ 3.77
TMEM248-205ENST00000433271 E9PCH4 1651 aa38.6■■■■□ 3.77
TMEM248-205ENST00000433271 SIN3AQ96ST3 1273 aa38.56■■■■□ 3.76
TMEM248-205ENST00000433271 ZEB1P37275 1124 aaPredicted RBP38.56■■■■□ 3.76
TMEM248-205ENST00000433271 CAMSAP1Q5T5Y3 1602 aa38.55■■■■□ 3.76
TMEM248-205ENST00000433271 RPRD2Q5VT52 1461 aaKnown RBP38.54■■■■□ 3.76
TMEM248-205ENST00000433271 ARHGAP31Q2M1Z3 1444 aa38.53■■■■□ 3.76
TMEM248-205ENST00000433271 ESF1Q9H501 851 aaKnown RBP38.52■■■■□ 3.76
TMEM248-205ENST00000433271 NPATQ14207 1427 aa38.51■■■■□ 3.76
TMEM248-205ENST00000433271 PLA2R1Q13018 1463 aa38.5■■■■□ 3.75
TMEM248-205ENST00000433271 NEUROD1Q13562 356 aa38.49■■■■□ 3.75
TMEM248-205ENST00000433271 PTPRTO14522 1441 aa38.48■■■■□ 3.75
TMEM248-205ENST00000433271 CLTCQ00610 1675 aaKnown RBP38.47■■■■□ 3.75
TMEM248-205ENST00000433271 CNTLNQ9NXG0 1405 aa38.45■■■■□ 3.75
TMEM248-205ENST00000433271 SPHKAPQ2M3C7 1700 aa38.41■■■■□ 3.74
TMEM248-205ENST00000433271 TRPM2O94759 1503 aa38.4■■■■□ 3.74
TMEM248-205ENST00000433271 CCDC144AA2RUR9 1427 aa38.39■■■■□ 3.74
TMEM248-205ENST00000433271 ZMYM3Q14202 1370 aa38.39■■■■□ 3.74
TMEM248-205ENST00000433271 TIMELESSQ9UNS1 1208 aa38.36■■■■□ 3.73
TMEM248-205ENST00000433271 NOS1P29475 1434 aa38.35■■■■□ 3.73
TMEM248-205ENST00000433271 MROH2AA6NES4 1674 aa38.34■■■■□ 3.73
TMEM248-205ENST00000433271 FER1L4A9Z1Z3 1794 aa38.33■■■■□ 3.73
TMEM248-205ENST00000433271 CFAP65Q6ZU64 1925 aaKnown RBP38.33■■■■□ 3.73
TMEM248-205ENST00000433271 ADAMTSL3P82987 1691 aa38.28■■■■□ 3.72
TMEM248-205ENST00000433271 PREX1Q8TCU6 1659 aa38.28■■■■□ 3.72
TMEM248-205ENST00000433271 TONSLQ96HA7 1378 aa38.28■■■■□ 3.72
TMEM248-205ENST00000433271 FBXO31Q5XUX0 539 aaPredicted RBP38.27■■■■□ 3.72
TMEM248-205ENST00000433271 ERVK-7P63135 1459 aa38.27■■■■□ 3.72
TMEM248-205ENST00000433271 CLTCL1P53675 1640 aa38.24■■■■□ 3.71
TMEM248-205ENST00000433271 MADDQ8WXG6 1647 aa38.24■■■■□ 3.71
TMEM248-205ENST00000433271 SYNMO15061 1565 aa38.22■■■■□ 3.71
TMEM248-205ENST00000433271 SPATA31D1Q6ZQQ2 1576 aa38.22■■■■□ 3.71
TMEM248-205ENST00000433271 UGGT1Q9NYU2 1555 aa38.2■■■■□ 3.71
TMEM248-205ENST00000433271 SLC52A1Q9NWF4 448 aa38.2■■■■□ 3.7
TMEM248-205ENST00000433271 C3P01024 1663 aa38.16■■■■□ 3.7
TMEM248-205ENST00000433271 PIK3C2BO00750 1634 aa38.16■■■■□ 3.7
TMEM248-205ENST00000433271 L3MBTL2Q969R5 705 aa38.16■■■■□ 3.7
TMEM248-205ENST00000433271 CEBPAP49715 358 aaPredicted RBP38.14■■■■□ 3.7
TMEM248-205ENST00000433271 RIMS1Q86UR5 1692 aaKnown RBP38.14■■■■□ 3.7
TMEM248-205ENST00000433271 SPATA31E1Q6ZUB1 1445 aa38.13■■■■□ 3.7
TMEM248-205ENST00000433271 IDI1Q13907 227 aa38.12■■■■□ 3.69
TMEM248-205ENST00000433271 NEURL4Q96JN8 1562 aa38.1■■■■□ 3.69
TMEM248-205ENST00000433271 TNRQ92752 1358 aa38.09■■■■□ 3.69
TMEM248-205ENST00000433271 KIF1BO60333 1816 aa38.08■■■■□ 3.69
TMEM248-205ENST00000433271 PPP1R15AO75807 674 aaPredicted RBP38.08■■■■□ 3.69
TMEM248-205ENST00000433271 RGL3Q3MIN7 710 aa38.08■■■■□ 3.69
TMEM248-205ENST00000433271 ADGRB3O60242 1522 aa38.01■■■■□ 3.68
TMEM248-205ENST00000433271 CHGAP10645 457 aaKnown RBP38.01■■■■□ 3.67
TMEM248-205ENST00000433271 PLPPR3Q6T4P5 718 aa38.01■■■■□ 3.67
TMEM248-205ENST00000433271 DCAF11Q8TEB1 546 aa37.98■■■■□ 3.67
TMEM248-205ENST00000433271 PTPRMP28827 1452 aa37.97■■■■□ 3.67
TMEM248-205ENST00000433271 NLRP1Q9C000 1473 aa37.95■■■■□ 3.67
TMEM248-205ENST00000433271 TMEM131LA2VDJ0 1609 aa37.94■■■■□ 3.66
TMEM248-205ENST00000433271 STAC3Q96MF2 364 aa37.93■■■■□ 3.66
TMEM248-205ENST00000433271 ZNF326Q5BKZ1 582 aaKnown RBP37.92■■■■□ 3.66
TMEM248-205ENST00000433271 STAG3Q9UJ98 1225 aa37.91■■■■□ 3.66
TMEM248-205ENST00000433271 KDM2AQ9Y2K7 1162 aa37.91■■■■□ 3.66
TMEM248-205ENST00000433271 RPGRIP1LQ68CZ1 1315 aa37.9■■■■□ 3.66
TMEM248-205ENST00000433271 KDM4FA0A1W2PPD8 638 aa37.88■■■■□ 3.65
TMEM248-205ENST00000433271 A2ML1A8K2U0 1454 aa37.86■■■■□ 3.65
TMEM248-205ENST00000433271 UHRF1BP1Q6BDS2 1440 aa37.85■■■■□ 3.65
TMEM248-205ENST00000433271 KDM5AP29375 1690 aaKnown RBP37.84■■■■□ 3.65
TMEM248-205ENST00000433271 NBPF8Q3BBV2 869 aa37.83■■■■□ 3.65
TMEM248-205ENST00000433271 MYO5BQ9ULV0 1848 aa37.82■■■■□ 3.65
TMEM248-205ENST00000433271 SETD1BQ9UPS6 1966 aaKnown RBP37.82■■■■□ 3.65
TMEM248-205ENST00000433271 MYO3AQ8NEV4 1616 aa37.81■■■■□ 3.64
TMEM248-205ENST00000433271 IFT172Q9UG01 1749 aa37.8■■■■□ 3.64
TMEM248-205ENST00000433271 MYOM2P54296 1465 aa37.78■■■■□ 3.64
TMEM248-205ENST00000433271 PRAG1Q86YV5 1406 aa37.78■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms