RNA–Protein interactions for RNA: ENST00000432343.1

ARPC1B-208, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 839 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-208ENST00000432343 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
ARPC1B-208ENST00000432343 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
ARPC1B-208ENST00000432343 CEP152O94986 1710 aa20.7■□□□□ 0.9
ARPC1B-208ENST00000432343 MROH1Q8NDA8 1641 aa20.68■□□□□ 0.9
ARPC1B-208ENST00000432343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.93e-7■□□□□ 9.7
ARPC1B-208ENST00000432343 ESF1Q9H501 851 aaKnown RBP20.68■□□□□ 0.9
ARPC1B-208ENST00000432343 DEPDC5O75140 1603 aa20.67■□□□□ 0.9
ARPC1B-208ENST00000432343 NAIPQ13075 1403 aa20.66■□□□□ 0.9
ARPC1B-208ENST00000432343 C3P01024 1663 aa20.64■□□□□ 0.89
ARPC1B-208ENST00000432343 HFM1A2PYH4 1435 aa20.63■□□□□ 0.89
ARPC1B-208ENST00000432343 CFAP65Q6ZU64 1925 aaKnown RBP20.63■□□□□ 0.89
ARPC1B-208ENST00000432343 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
ARPC1B-208ENST00000432343 KDM5DQ9BY66 1539 aa20.63■□□□□ 0.89
ARPC1B-208ENST00000432343 MROH2AA6NES4 1674 aa20.62■□□□□ 0.89
ARPC1B-208ENST00000432343 UNC13BO14795 1591 aa20.62■□□□□ 0.89
ARPC1B-208ENST00000432343 PTPRMP28827 1452 aa20.62■□□□□ 0.89
ARPC1B-208ENST00000432343 ZC3H13Q5T200 1668 aaKnown RBP20.61■□□□□ 0.89
ARPC1B-208ENST00000432343 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
ARPC1B-208ENST00000432343 WASHC2CQ9Y4E1 1318 aa20.6■□□□□ 0.89
ARPC1B-208ENST00000432343 CAMSAP1Q5T5Y3 1602 aa20.6■□□□□ 0.89
ARPC1B-208ENST00000432343 ABCC3O15438 1527 aa20.59■□□□□ 0.89
ARPC1B-208ENST00000432343 CEBPAP49715 358 aaPredicted RBP20.59■□□□□ 0.89
ARPC1B-208ENST00000432343 KANK1Q14678 1352 aa20.59■□□□□ 0.89
ARPC1B-208ENST00000432343 CNTLNQ9NXG0 1405 aa20.58■□□□□ 0.88
ARPC1B-208ENST00000432343 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
ARPC1B-208ENST00000432343 SETD5Q9C0A6 1442 aa20.54■□□□□ 0.88
ARPC1B-208ENST00000432343 FAM135AQ9P2D6 1515 aa20.54■□□□□ 0.88
ARPC1B-208ENST00000432343 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
ARPC1B-208ENST00000432343 VWDEQ8N2E2 1590 aa20.54■□□□□ 0.88
ARPC1B-208ENST00000432343 IQGAP3Q86VI3 1631 aa20.53■□□□□ 0.88
ARPC1B-208ENST00000432343 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
ARPC1B-208ENST00000432343 ZMYM3Q14202 1370 aa20.53■□□□□ 0.88
ARPC1B-208ENST00000432343 NUP155O75694 1391 aa20.52■□□□□ 0.88
ARPC1B-208ENST00000432343 TET3O43151 1660 aa20.51■□□□□ 0.87
ARPC1B-208ENST00000432343 RAB3GAP2Q9H2M9 1393 aa20.5■□□□□ 0.87
ARPC1B-208ENST00000432343 E9PCH4 1651 aa20.48■□□□□ 0.87
ARPC1B-208ENST00000432343 PREX1Q8TCU6 1659 aa20.48■□□□□ 0.87
ARPC1B-208ENST00000432343 EFCAB6Q5THR3 1501 aa20.48■□□□□ 0.87
ARPC1B-208ENST00000432343 LMTK2Q8IWU2 1503 aa20.48■□□□□ 0.87
ARPC1B-208ENST00000432343 PZPP20742 1482 aa20.46■□□□□ 0.87
ARPC1B-208ENST00000432343 FBXO31Q5XUX0 539 aaPredicted RBP20.46■□□□□ 0.87
ARPC1B-208ENST00000432343 NPATQ14207 1427 aa20.44■□□□□ 0.86
ARPC1B-208ENST00000432343 SETD1BQ9UPS6 1966 aaKnown RBP20.43■□□□□ 0.86
ARPC1B-208ENST00000432343 MYO3AQ8NEV4 1616 aa20.42■□□□□ 0.86
ARPC1B-208ENST00000432343 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
ARPC1B-208ENST00000432343 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.85
ARPC1B-208ENST00000432343 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
ARPC1B-208ENST00000432343 PCGF6Q9BYE7 350 aa20.39■□□□□ 0.85
ARPC1B-208ENST00000432343 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
ARPC1B-208ENST00000432343 TNRQ92752 1358 aa20.38■□□□□ 0.85
ARPC1B-208ENST00000432343 SPHKAPQ2M3C7 1700 aa20.38■□□□□ 0.85
ARPC1B-208ENST00000432343 SYNMO15061 1565 aa20.36■□□□□ 0.85
ARPC1B-208ENST00000432343 PKD2Q13563 968 aa20.35■□□□□ 0.85
ARPC1B-208ENST00000432343 UHRF1BP1Q6BDS2 1440 aa20.35■□□□□ 0.85
ARPC1B-208ENST00000432343 FOXD1Q16676 465 aa20.34■□□□□ 0.85
ARPC1B-208ENST00000432343 RPRD2Q5VT52 1461 aaKnown RBP20.34■□□□□ 0.85
ARPC1B-208ENST00000432343 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.85
ARPC1B-208ENST00000432343 MPHOSPH9Q99550 1183 aa20.33■□□□□ 0.85
ARPC1B-208ENST00000432343 CEP170BQ9Y4F5 1589 aaPredicted RBP20.32■□□□□ 0.84
ARPC1B-208ENST00000432343 LMTK3Q96Q04 1460 aa20.31■□□□□ 0.84
ARPC1B-208ENST00000432343 UGGT1Q9NYU2 1555 aa20.31■□□□□ 0.84
ARPC1B-208ENST00000432343 MYO5BQ9ULV0 1848 aa20.31■□□□□ 0.84
ARPC1B-208ENST00000432343 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
ARPC1B-208ENST00000432343 NOS1P29475 1434 aa20.3■□□□□ 0.84
ARPC1B-208ENST00000432343 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
ARPC1B-208ENST00000432343 HSPA2P54652 639 aa20.28■□□□□ 0.84
ARPC1B-208ENST00000432343 A2ML1A8K2U0 1454 aa20.27■□□□□ 0.84
ARPC1B-208ENST00000432343 NLRP1Q9C000 1473 aa20.27■□□□□ 0.84
ARPC1B-208ENST00000432343 HRCP23327 699 aa20.27■□□□□ 0.84
ARPC1B-208ENST00000432343 UBR1Q8IWV7 1749 aa20.27■□□□□ 0.83
ARPC1B-208ENST00000432343 CLTCL1P53675 1640 aa20.26■□□□□ 0.83
ARPC1B-208ENST00000432343 TRPM2O94759 1503 aa20.24■□□□□ 0.83
ARPC1B-208ENST00000432343 KIF1BO60333 1816 aa20.24■□□□□ 0.83
ARPC1B-208ENST00000432343 CHGAP10645 457 aaKnown RBP20.23■□□□□ 0.83
ARPC1B-208ENST00000432343 IDI1Q13907 227 aa20.23■□□□□ 0.83
ARPC1B-208ENST00000432343 STAG3Q9UJ98 1225 aa20.23■□□□□ 0.83
ARPC1B-208ENST00000432343 PTPRTO14522 1441 aa20.21■□□□□ 0.83
ARPC1B-208ENST00000432343 PLA2R1Q13018 1463 aa20.21■□□□□ 0.83
ARPC1B-208ENST00000432343 ADGRB3O60242 1522 aa20.21■□□□□ 0.83
ARPC1B-208ENST00000432343 TMEM131LA2VDJ0 1609 aa20.19■□□□□ 0.82
ARPC1B-208ENST00000432343 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
ARPC1B-208ENST00000432343 POLR1AO95602 1720 aaPredicted RBP20.18■□□□□ 0.82
ARPC1B-208ENST00000432343 KDM5AP29375 1690 aaKnown RBP20.16■□□□□ 0.82
ARPC1B-208ENST00000432343 STRCQ7RTU9 1775 aa20.16■□□□□ 0.82
ARPC1B-208ENST00000432343 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
ARPC1B-208ENST00000432343 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
ARPC1B-208ENST00000432343 DHX57Q6P158 1386 aaKnown RBP20.13■□□□□ 0.81
ARPC1B-208ENST00000432343 NCKAP5LQ9HCH0 1330 aa20.12■□□□□ 0.81
ARPC1B-208ENST00000432343 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
ARPC1B-208ENST00000432343 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
ARPC1B-208ENST00000432343 ANKRD30BQ9BXX2 1392 aa20.1■□□□□ 0.81
ARPC1B-208ENST00000432343 NUTM2DQ5VT03 806 aaPredicted RBP20.08■□□□□ 0.81
ARPC1B-208ENST00000432343 SLIT1O75093 1534 aa20.07■□□□□ 0.8
ARPC1B-208ENST00000432343 TMEM2Q9UHN6 1383 aa20.07■□□□□ 0.8
ARPC1B-208ENST00000432343 RGL3Q3MIN7 710 aa20.06■□□□□ 0.8
ARPC1B-208ENST00000432343 NEURL4Q96JN8 1562 aa20.06■□□□□ 0.8
ARPC1B-208ENST00000432343 RIMS2Q9UQ26 1411 aa20.06■□□□□ 0.8
ARPC1B-208ENST00000432343 ARHGAP23Q9P227 1491 aa20.05■□□□□ 0.8
ARPC1B-208ENST00000432343 TXNDC2Q86VQ3 553 aa20.05■□□□□ 0.8
ARPC1B-208ENST00000432343 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms