RNA–Protein interactions for RNA: ENST00000432287.6

SDHC-204, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-204ENST00000432287 CDK11AQ9UQ88 783 aaPredicted RBP12.19□□□□□ -0.46
SDHC-204ENST00000432287 GPATCH8Q9UKJ3 1502 aaKnown RBP12.19□□□□□ -0.46
SDHC-204ENST00000432287 ZC3H13Q5T200 1668 aaKnown RBP12.19□□□□□ -0.46
SDHC-204ENST00000432287 SPAG9O60271 1321 aaKnown RBP12.18□□□□□ -0.46
SDHC-204ENST00000432287 IQGAP1P46940 1657 aa12.18□□□□□ -0.46
SDHC-204ENST00000432287 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
SDHC-204ENST00000432287 TNRQ92752 1358 aa12.17□□□□□ -0.46
SDHC-204ENST00000432287 EEA1Q15075 1411 aa12.16□□□□□ -0.46
SDHC-204ENST00000432287 SYNMO15061 1565 aa12.16□□□□□ -0.46
SDHC-204ENST00000432287 ADGBQ8N7X0 1667 aa12.16□□□□□ -0.46
SDHC-204ENST00000432287 PZPP20742 1482 aa12.15□□□□□ -0.46
SDHC-204ENST00000432287 KIAA1107Q9UPP5 1409 aa12.14□□□□□ -0.47
SDHC-204ENST00000432287 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
SDHC-204ENST00000432287 MIA2Q96PC5 1412 aa12.12□□□□□ -0.47
SDHC-204ENST00000432287 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
SDHC-204ENST00000432287 MBD5Q9P267 1494 aa12.12□□□□□ -0.47
SDHC-204ENST00000432287 UGGT1Q9NYU2 1555 aa12.12□□□□□ -0.47
SDHC-204ENST00000432287 EP400Q96L91 3159 aa12.11□□□□□ -0.47
SDHC-204ENST00000432287 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
SDHC-204ENST00000432287 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
SDHC-204ENST00000432287 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
SDHC-204ENST00000432287 NLRP1Q9C000 1473 aa12.09□□□□□ -0.47
SDHC-204ENST00000432287 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
SDHC-204ENST00000432287 DHX29Q7Z478 1369 aaKnown RBP12.08□□□□□ -0.48
SDHC-204ENST00000432287 KDM5DQ9BY66 1539 aa12.08□□□□□ -0.48
SDHC-204ENST00000432287 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.48
SDHC-204ENST00000432287 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
SDHC-204ENST00000432287 THEMISQ8N1K5 641 aaPredicted RBP12.07□□□□□ -0.48
SDHC-204ENST00000432287 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
SDHC-204ENST00000432287 NCOA2Q15596 1464 aa12.07□□□□□ -0.48
SDHC-204ENST00000432287 UBR1Q8IWV7 1749 aa12.06□□□□□ -0.48
SDHC-204ENST00000432287 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
SDHC-204ENST00000432287 FAM135AQ9P2D6 1515 aa12.06□□□□□ -0.48
SDHC-204ENST00000432287 LTKP29376 864 aa12.05□□□□□ -0.48
SDHC-204ENST00000432287 RTEL1-TNFRSF6BF6WH68 1400 aa12.04□□□□□ -0.48
SDHC-204ENST00000432287 PLEKHH2Q8IVE3 1493 aa12.04□□□□□ -0.48
SDHC-204ENST00000432287 LRP6O75581 1613 aa12.04□□□□□ -0.48
SDHC-204ENST00000432287 ARHGAP23Q9P227 1491 aa12.03□□□□□ -0.48
SDHC-204ENST00000432287 TIAM1Q13009 1591 aa12.03□□□□□ -0.48
SDHC-204ENST00000432287 CFAP65Q6ZU64 1925 aaKnown RBP12.03□□□□□ -0.48
SDHC-204ENST00000432287 KIF3BO15066 747 aa12.02□□□□□ -0.49
SDHC-204ENST00000432287 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.49
SDHC-204ENST00000432287 UBTFP17480 764 aaKnown RBP12.01□□□□□ -0.49
SDHC-204ENST00000432287 FYCO1Q9BQS8 1478 aa12.01□□□□□ -0.49
SDHC-204ENST00000432287 SLIT1O75093 1534 aa12.01□□□□□ -0.49
SDHC-204ENST00000432287 MROH1Q8NDA8 1641 aa12□□□□□ -0.49
SDHC-204ENST00000432287 ERVK-7P63135 1459 aa12□□□□□ -0.49
SDHC-204ENST00000432287 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
SDHC-204ENST00000432287 ABCC3O15438 1527 aa12□□□□□ -0.49
SDHC-204ENST00000432287 WASHC2CQ9Y4E1 1318 aa11.99□□□□□ -0.49
SDHC-204ENST00000432287 TMEM94Q12767 1356 aa11.99□□□□□ -0.49
SDHC-204ENST00000432287 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
SDHC-204ENST00000432287 RBM33Q96EV2 1170 aaKnown RBP11.98□□□□□ -0.49
SDHC-204ENST00000432287 PHLPP1O60346 1717 aa11.97□□□□□ -0.49
SDHC-204ENST00000432287 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
SDHC-204ENST00000432287 TET3O43151 1660 aa11.97□□□□□ -0.49
SDHC-204ENST00000432287 CEP152O94986 1710 aa11.94□□□□□ -0.5
SDHC-204ENST00000432287 CAMSAP2Q08AD1 1489 aa11.93□□□□□ -0.5
SDHC-204ENST00000432287 JCADQ9P266 1359 aa11.92□□□□□ -0.5
SDHC-204ENST00000432287 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
SDHC-204ENST00000432287 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
SDHC-204ENST00000432287 PIK3C2BO00750 1634 aa11.92□□□□□ -0.5
SDHC-204ENST00000432287 NWD1Q149M9 1564 aa11.92□□□□□ -0.5
SDHC-204ENST00000432287 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
SDHC-204ENST00000432287 TXNDC2Q86VQ3 553 aa11.91□□□□□ -0.5
SDHC-204ENST00000432287 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
SDHC-204ENST00000432287 KCNA6P17658 529 aa11.89□□□□□ -0.51
SDHC-204ENST00000432287 SHPRHQ149N8 1683 aa11.89□□□□□ -0.51
SDHC-204ENST00000432287 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
SDHC-204ENST00000432287 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
SDHC-204ENST00000432287 SLAIN2Q9P270 581 aa11.88□□□□□ -0.51
SDHC-204ENST00000432287 TMEM2Q9UHN6 1383 aa11.88□□□□□ -0.51
SDHC-204ENST00000432287 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
SDHC-204ENST00000432287 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
SDHC-204ENST00000432287 SLC26A8Q96RN1 970 aa11.86□□□□□ -0.51
SDHC-204ENST00000432287 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
SDHC-204ENST00000432287 SETBP1Q9Y6X0 1596 aa11.86□□□□□ -0.51
SDHC-204ENST00000432287 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
SDHC-204ENST00000432287 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
SDHC-204ENST00000432287 AHDC1Q5TGY3 1603 aaPredicted RBP11.86□□□□□ -0.51
SDHC-204ENST00000432287 EIF2AK4Q9P2K8 1649 aaKnown RBP11.86□□□□□ -0.51
SDHC-204ENST00000432287 RGS12O14924 1447 aa11.86□□□□□ -0.51
SDHC-204ENST00000432287 FGD6Q6ZV73 1430 aa11.86□□□□□ -0.51
SDHC-204ENST00000432287 MAST1Q9Y2H9 1570 aa11.85□□□□□ -0.51
SDHC-204ENST00000432287 MTUS2Q5JR59 1369 aa11.85□□□□□ -0.51
SDHC-204ENST00000432287 PROSER2Q86WR7 435 aaPredicted RBP11.85□□□□□ -0.51
SDHC-204ENST00000432287 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
SDHC-204ENST00000432287 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
SDHC-204ENST00000432287 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
SDHC-204ENST00000432287 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
SDHC-204ENST00000432287 ZNF772Q68DY9 489 aaPredicted RBP11.83□□□□□ -0.52
SDHC-204ENST00000432287 RXRBP28702 533 aa11.82□□□□□ -0.52
SDHC-204ENST00000432287 EFCAB6Q5THR3 1501 aa11.81□□□□□ -0.52
SDHC-204ENST00000432287 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.8□□□□□ -0.52
SDHC-204ENST00000432287 IDI1Q13907 227 aa11.8□□□□□ -0.52
SDHC-204ENST00000432287 MSH6P52701 1360 aa11.79□□□□□ -0.52
SDHC-204ENST00000432287 AFF2P51816 1311 aa11.79□□□□□ -0.52
SDHC-204ENST00000432287 MYO5BQ9ULV0 1848 aa11.79□□□□□ -0.52
SDHC-204ENST00000432287 EID1Q9Y6B2 187 aa11.78□□□□□ -0.52
SDHC-204ENST00000432287 ZFYVE9O95405 1425 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms