RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 ABCC1P33527 1531 aa13.51□□□□□ -0.25
CDH13-203ENST00000431540 TRAPPC8Q9Y2L5 1435 aa13.51□□□□□ -0.25
CDH13-203ENST00000431540 MROH2AA6NES4 1674 aa13.5□□□□□ -0.25
CDH13-203ENST00000431540 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
CDH13-203ENST00000431540 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
CDH13-203ENST00000431540 PLEKHH2Q8IVE3 1493 aa13.49□□□□□ -0.25
CDH13-203ENST00000431540 MYT1LQ9UL68 1186 aa13.49□□□□□ -0.25
CDH13-203ENST00000431540 ABCA6Q8N139 1617 aa13.49□□□□□ -0.25
CDH13-203ENST00000431540 IQSEC2Q5JU85 1478 aa13.48□□□□□ -0.25
CDH13-203ENST00000431540 NPATQ14207 1427 aa13.48□□□□□ -0.25
CDH13-203ENST00000431540 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
CDH13-203ENST00000431540 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.25
CDH13-203ENST00000431540 SAMD9LQ8IVG5 1584 aa13.44□□□□□ -0.26
CDH13-203ENST00000431540 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
CDH13-203ENST00000431540 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
CDH13-203ENST00000431540 SPAG9O60271 1321 aaKnown RBP13.42□□□□□ -0.26
CDH13-203ENST00000431540 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
CDH13-203ENST00000431540 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
CDH13-203ENST00000431540 ADGBQ8N7X0 1667 aa13.4□□□□□ -0.26
CDH13-203ENST00000431540 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
CDH13-203ENST00000431540 RTEL1-TNFRSF6BF6WH68 1400 aa13.39□□□□□ -0.27
CDH13-203ENST00000431540 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
CDH13-203ENST00000431540 PKD2Q13563 968 aa13.39□□□□□ -0.27
CDH13-203ENST00000431540 ATP7AQ04656 1500 aa13.39□□□□□ -0.27
CDH13-203ENST00000431540 PLXNC1O60486 1568 aa13.38□□□□□ -0.27
CDH13-203ENST00000431540 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
CDH13-203ENST00000431540 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
CDH13-203ENST00000431540 SUPT6HQ7KZ85 1726 aaKnown RBP13.38□□□□□ -0.27
CDH13-203ENST00000431540 FAM135AQ9P2D6 1515 aa13.38□□□□□ -0.27
CDH13-203ENST00000431540 INO80Q9ULG1 1556 aaPredicted RBP13.37□□□□□ -0.27
CDH13-203ENST00000431540 PLA2R1Q13018 1463 aa13.37□□□□□ -0.27
CDH13-203ENST00000431540 LTBP4Q8N2S1 1624 aa13.37□□□□□ -0.27
CDH13-203ENST00000431540 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
CDH13-203ENST00000431540 A2MP01023 1474 aa13.36□□□□□ -0.27
CDH13-203ENST00000431540 SYCP2Q9BX26 1530 aa13.36□□□□□ -0.27
CDH13-203ENST00000431540 CLCN6P51797 869 aa13.36□□□□□ -0.27
CDH13-203ENST00000431540 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDH13-203ENST00000431540 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
CDH13-203ENST00000431540 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
CDH13-203ENST00000431540 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
CDH13-203ENST00000431540 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
CDH13-203ENST00000431540 CAMSAP1Q5T5Y3 1602 aa13.34□□□□□ -0.27
CDH13-203ENST00000431540 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
CDH13-203ENST00000431540 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
CDH13-203ENST00000431540 PTPRKQ15262 1439 aa13.32□□□□□ -0.28
CDH13-203ENST00000431540 CEP162Q5TB80 1403 aa13.32□□□□□ -0.28
CDH13-203ENST00000431540 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
CDH13-203ENST00000431540 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
CDH13-203ENST00000431540 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
CDH13-203ENST00000431540 MBD5Q9P267 1494 aa13.31□□□□□ -0.28
CDH13-203ENST00000431540 EHBP1L1Q8N3D4 1523 aa13.31□□□□□ -0.28
CDH13-203ENST00000431540 TCOF1Q13428 1488 aaKnown RBP13.3□□□□□ -0.28
CDH13-203ENST00000431540 CEP170BQ9Y4F5 1589 aaPredicted RBP13.29□□□□□ -0.28
CDH13-203ENST00000431540 MYO3AQ8NEV4 1616 aa13.29□□□□□ -0.28
CDH13-203ENST00000431540 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
CDH13-203ENST00000431540 GGT6Q6P531 493 aa13.28□□□□□ -0.28
CDH13-203ENST00000431540 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
CDH13-203ENST00000431540 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
CDH13-203ENST00000431540 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
CDH13-203ENST00000431540 SOCS7O14512 581 aa13.26□□□□□ -0.29
CDH13-203ENST00000431540 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
CDH13-203ENST00000431540 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
CDH13-203ENST00000431540 ARHGEF5Q12774 1597 aa13.24□□□□□ -0.29
CDH13-203ENST00000431540 TSPY4P0CV99 314 aa13.24□□□□□ -0.29
CDH13-203ENST00000431540 TSPY10P0CW01 314 aa13.24□□□□□ -0.29
CDH13-203ENST00000431540 THEMISQ8N1K5 641 aaPredicted RBP13.24□□□□□ -0.29
CDH13-203ENST00000431540 POLR1AO95602 1720 aaPredicted RBP13.24□□□□□ -0.29
CDH13-203ENST00000431540 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
CDH13-203ENST00000431540 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
CDH13-203ENST00000431540 PZPP20742 1482 aa13.23□□□□□ -0.29
CDH13-203ENST00000431540 CPS1P31327 1500 aa13.22□□□□□ -0.29
CDH13-203ENST00000431540 NLRP1Q9C000 1473 aa13.22□□□□□ -0.29
CDH13-203ENST00000431540 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
CDH13-203ENST00000431540 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
CDH13-203ENST00000431540 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
CDH13-203ENST00000431540 MAP3K1Q13233 1512 aa13.21□□□□□ -0.29
CDH13-203ENST00000431540 KDM5DQ9BY66 1539 aa13.21□□□□□ -0.29
CDH13-203ENST00000431540 DEPDC5O75140 1603 aa13.21□□□□□ -0.3
CDH13-203ENST00000431540 WASHC2CQ9Y4E1 1318 aa13.2□□□□□ -0.3
CDH13-203ENST00000431540 KIF3BO15066 747 aa13.2□□□□□ -0.3
CDH13-203ENST00000431540 MED14O60244 1454 aa13.2□□□□□ -0.3
CDH13-203ENST00000431540 TNRQ92752 1358 aa13.2□□□□□ -0.3
CDH13-203ENST00000431540 ZC3H13Q5T200 1668 aaKnown RBP13.19□□□□□ -0.3
CDH13-203ENST00000431540 NCOA2Q15596 1464 aa13.19□□□□□ -0.3
CDH13-203ENST00000431540 POTEMA6NI47 508 aa13.19□□□□□ -0.3
CDH13-203ENST00000431540 TOM1O60784 492 aa13.19□□□□□ -0.3
CDH13-203ENST00000431540 OTUD5Q96G74 571 aa13.19□□□□□ -0.3
CDH13-203ENST00000431540 MIA2Q96PC5 1412 aa13.19□□□□□ -0.3
CDH13-203ENST00000431540 SPATA31D1Q6ZQQ2 1576 aa13.19□□□□□ -0.3
CDH13-203ENST00000431540 MAST1Q9Y2H9 1570 aa13.19□□□□□ -0.3
CDH13-203ENST00000431540 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
CDH13-203ENST00000431540 UBAP1LF5GYI3 381 aa13.18□□□□□ -0.3
CDH13-203ENST00000431540 EIF2AK4Q9P2K8 1649 aaKnown RBP13.17□□□□□ -0.3
CDH13-203ENST00000431540 CAMSAP2Q08AD1 1489 aa13.17□□□□□ -0.3
CDH13-203ENST00000431540 ILDR2Q71H61 639 aa13.16□□□□□ -0.3
CDH13-203ENST00000431540 RNF17Q9BXT8 1623 aaKnown RBP13.16□□□□□ -0.3
CDH13-203ENST00000431540 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
CDH13-203ENST00000431540 ZBTB22O15209 634 aa13.15□□□□□ -0.3
CDH13-203ENST00000431540 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
CDH13-203ENST00000431540 NEURL4Q96JN8 1562 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms