RNA–Protein interactions for RNA: ENST00000430704.6

SIMC1-204, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIMC1, Length 1,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-204ENST00000430704 RAB3GAP2Q9H2M9 1393 aa33.36■■■□□ 2.93
SIMC1-204ENST00000430704 RNF17Q9BXT8 1623 aaKnown RBP33.33■■■□□ 2.93
SIMC1-204ENST00000430704 MROH1Q8NDA8 1641 aa33.32■■■□□ 2.92
SIMC1-204ENST00000430704 DEPDC5O75140 1603 aa33.31■■■□□ 2.92
SIMC1-204ENST00000430704 TRIM52Q96A61 297 aa33.29■■■□□ 2.92
SIMC1-204ENST00000430704 UNC13BO14795 1591 aa33.26■■■□□ 2.92
SIMC1-204ENST00000430704 PRDM15P57071 1507 aaPredicted RBP33.26■■■□□ 2.92
SIMC1-204ENST00000430704 NUP155O75694 1391 aa33.24■■■□□ 2.91
SIMC1-204ENST00000430704 WASHC2CQ9Y4E1 1318 aa33.24■■■□□ 2.91
SIMC1-204ENST00000430704 ESF1Q9H501 851 aaKnown RBP33.24■■■□□ 2.91
SIMC1-204ENST00000430704 MADDQ8WXG6 1647 aa33.23■■■□□ 2.91
SIMC1-204ENST00000430704 FER1L4A9Z1Z3 1794 aa33.23■■■□□ 2.91
SIMC1-204ENST00000430704 ADAMTSL3P82987 1691 aa33.22■■■□□ 2.91
SIMC1-204ENST00000430704 CEP152O94986 1710 aa33.22■■■□□ 2.91
SIMC1-204ENST00000430704 KANK1Q14678 1352 aa33.21■■■□□ 2.91
SIMC1-204ENST00000430704 CLTCQ00610 1675 aaKnown RBP33.2■■■□□ 2.91
SIMC1-204ENST00000430704 KDM5DQ9BY66 1539 aa33.18■■■□□ 2.9
SIMC1-204ENST00000430704 ABCC3O15438 1527 aa33.17■■■□□ 2.9
SIMC1-204ENST00000430704 PLPPR3Q6T4P5 718 aa33.17■■■□□ 2.9
SIMC1-204ENST00000430704 RIMS1Q86UR5 1692 aaKnown RBP33.16■■■□□ 2.9
SIMC1-204ENST00000430704 KDM4FA0A1W2PPD8 638 aa33.16■■■□□ 2.9
SIMC1-204ENST00000430704 VWDEQ8N2E2 1590 aa33.16■■■□□ 2.9
SIMC1-204ENST00000430704 PPP6R1Q9UPN7 881 aa33.15■■■□□ 2.9
SIMC1-204ENST00000430704 FAM135AQ9P2D6 1515 aa33.14■■■□□ 2.9
SIMC1-204ENST00000430704 IQGAP3Q86VI3 1631 aa33.13■■■□□ 2.89
SIMC1-204ENST00000430704 ZC3H13Q5T200 1668 aaKnown RBP33.11■■■□□ 2.89
SIMC1-204ENST00000430704 HRCP23327 699 aa33.1■■■□□ 2.89
SIMC1-204ENST00000430704 PZPP20742 1482 aa33.09■■■□□ 2.89
SIMC1-204ENST00000430704 CEBPAP49715 358 aaPredicted RBP33.08■■■□□ 2.89
SIMC1-204ENST00000430704 SLC4A1APQ9BWU0 796 aaKnown RBP33.08■■■□□ 2.89
SIMC1-204ENST00000430704 CAMSAP1Q5T5Y3 1602 aa33.08■■■□□ 2.89
SIMC1-204ENST00000430704 CNTLNQ9NXG0 1405 aa33.07■■■□□ 2.89
SIMC1-204ENST00000430704 ZMYM3Q14202 1370 aa33.07■■■□□ 2.88
SIMC1-204ENST00000430704 CFAP65Q6ZU64 1925 aaKnown RBP33.06■■■□□ 2.88
SIMC1-204ENST00000430704 LMTK2Q8IWU2 1503 aa33.05■■■□□ 2.88
SIMC1-204ENST00000430704 TET3O43151 1660 aa33.04■■■□□ 2.88
SIMC1-204ENST00000430704 MPHOSPH9Q99550 1183 aa33.04■■■□□ 2.88
SIMC1-204ENST00000430704 MROH2AA6NES4 1674 aa33.03■■■□□ 2.88
SIMC1-204ENST00000430704 C3P01024 1663 aa33.02■■■□□ 2.88
SIMC1-204ENST00000430704 EFCAB6Q5THR3 1501 aa33.02■■■□□ 2.88
SIMC1-204ENST00000430704 PTPRMP28827 1452 aa33.01■■■□□ 2.87
SIMC1-204ENST00000430704 FOXD1Q16676 465 aa33■■■□□ 2.87
SIMC1-204ENST00000430704 PKD2Q13563 968 aa33■■■□□ 2.87
SIMC1-204ENST00000430704 NPATQ14207 1427 aa33■■■□□ 2.87
SIMC1-204ENST00000430704 ACIN1Q9UKV3 1341 aaKnown RBP33■■■□□ 2.87
SIMC1-204ENST00000430704 E9PCH4 1651 aa32.99■■■□□ 2.87
SIMC1-204ENST00000430704 FBXO31Q5XUX0 539 aaPredicted RBP32.98■■■□□ 2.87
SIMC1-204ENST00000430704 ARHGAP31Q2M1Z3 1444 aa32.93■■■□□ 2.86
SIMC1-204ENST00000430704 PREX1Q8TCU6 1659 aa32.88■■■□□ 2.85
SIMC1-204ENST00000430704 RPRD2Q5VT52 1461 aaKnown RBP32.87■■■□□ 2.85
SIMC1-204ENST00000430704 DHX57Q6P158 1386 aaKnown RBP32.86■■■□□ 2.85
SIMC1-204ENST00000430704 ERVK-7P63135 1459 aa32.86■■■□□ 2.85
SIMC1-204ENST00000430704 SPATA31D1Q6ZQQ2 1576 aa32.81■■■□□ 2.84
SIMC1-204ENST00000430704 SPHKAPQ2M3C7 1700 aa32.81■■■□□ 2.84
SIMC1-204ENST00000430704 NOS1P29475 1434 aa32.79■■■□□ 2.84
SIMC1-204ENST00000430704 TNRQ92752 1358 aa32.78■■■□□ 2.84
SIMC1-204ENST00000430704 SYNMO15061 1565 aa32.78■■■□□ 2.84
SIMC1-204ENST00000430704 UGGT1Q9NYU2 1555 aa32.77■■■□□ 2.84
SIMC1-204ENST00000430704 PLA2R1Q13018 1463 aa32.77■■■□□ 2.84
SIMC1-204ENST00000430704 PTPRTO14522 1441 aa32.74■■■□□ 2.83
SIMC1-204ENST00000430704 SETD1BQ9UPS6 1966 aaKnown RBP32.71■■■□□ 2.83
SIMC1-204ENST00000430704 TRPM2O94759 1503 aa32.7■■■□□ 2.83
SIMC1-204ENST00000430704 ANKRD30BQ9BXX2 1392 aa32.69■■■□□ 2.82
SIMC1-204ENST00000430704 IDI1Q13907 227 aa32.69■■■□□ 2.82
SIMC1-204ENST00000430704 MYO3AQ8NEV4 1616 aa32.68■■■□□ 2.82
SIMC1-204ENST00000430704 CLTCL1P53675 1640 aa32.66■■■□□ 2.82
SIMC1-204ENST00000430704 CCER1Q8TC90 406 aaPredicted RBP32.66■■■□□ 2.82
SIMC1-204ENST00000430704 CCDC144AA2RUR9 1427 aa32.64■■■□□ 2.82
SIMC1-204ENST00000430704 SLC52A1Q9NWF4 448 aa32.64■■■□□ 2.82
SIMC1-204ENST00000430704 PIK3C2BO00750 1634 aa32.63■■■□□ 2.81
SIMC1-204ENST00000430704 CHGAP10645 457 aaKnown RBP32.63■■■□□ 2.81
SIMC1-204ENST00000430704 UHRF1BP1Q6BDS2 1440 aa32.62■■■□□ 2.81
SIMC1-204ENST00000430704 AEBP2Q6ZN18 517 aaPredicted RBP32.61■■■□□ 2.81
SIMC1-204ENST00000430704 NLRP1Q9C000 1473 aa32.61■■■□□ 2.81
SIMC1-204ENST00000430704 SIN3AQ96ST3 1273 aa32.59■■■□□ 2.81
SIMC1-204ENST00000430704 STAG3Q9UJ98 1225 aa32.59■■■□□ 2.81
SIMC1-204ENST00000430704 CEP170BQ9Y4F5 1589 aaPredicted RBP32.58■■■□□ 2.81
SIMC1-204ENST00000430704 A2ML1A8K2U0 1454 aa32.55■■■□□ 2.8
SIMC1-204ENST00000430704 NEUROD1Q13562 356 aa32.55■■■□□ 2.8
SIMC1-204ENST00000430704 MYO5BQ9ULV0 1848 aa32.54■■■□□ 2.8
SIMC1-204ENST00000430704 ZNF142P52746 1687 aaPredicted RBP32.53■■■□□ 2.8
SIMC1-204ENST00000430704 KIF1BO60333 1816 aa32.53■■■□□ 2.8
SIMC1-204ENST00000430704 UBR1Q8IWV7 1749 aa32.52■■■□□ 2.8
SIMC1-204ENST00000430704 TMEM131LA2VDJ0 1609 aa32.51■■■□□ 2.79
SIMC1-204ENST00000430704 ADGRB3O60242 1522 aa32.51■■■□□ 2.79
SIMC1-204ENST00000430704 LMTK3Q96Q04 1460 aa32.5■■■□□ 2.79
SIMC1-204ENST00000430704 RGL3Q3MIN7 710 aa32.49■■■□□ 2.79
SIMC1-204ENST00000430704 HSPA2P54652 639 aa32.49■■■□□ 2.79
SIMC1-204ENST00000430704 ZNF326Q5BKZ1 582 aaKnown RBP32.47■■■□□ 2.79
SIMC1-204ENST00000430704 THEMISQ8N1K5 641 aaPredicted RBP32.43■■■□□ 2.78
SIMC1-204ENST00000430704 SPATA31E1Q6ZUB1 1445 aa32.42■■■□□ 2.78
SIMC1-204ENST00000430704 KDM5AP29375 1690 aaKnown RBP32.41■■■□□ 2.78
SIMC1-204ENST00000430704 NUTM2DQ5VT03 806 aaPredicted RBP32.4■■■□□ 2.78
SIMC1-204ENST00000430704 CLSPNQ9HAW4 1339 aa32.39■■■□□ 2.78
SIMC1-204ENST00000430704 SENP3Q9H4L4 574 aaPredicted RBP32.36■■■□□ 2.77
SIMC1-204ENST00000430704 TMEM2Q9UHN6 1383 aa32.36■■■□□ 2.77
SIMC1-204ENST00000430704 RIMS2Q9UQ26 1411 aa32.32■■■□□ 2.76
SIMC1-204ENST00000430704 LTKP29376 864 aa32.3■■■□□ 2.76
SIMC1-204ENST00000430704 SLIT1O75093 1534 aa32.3■■■□□ 2.76
SIMC1-204ENST00000430704 NEXMIFQ5QGS0 1516 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms