RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 RNF17Q9BXT8 1623 aaKnown RBP27.19■■□□□ 1.94
CDC42EP1-203ENST00000430687 FAM135AQ9P2D6 1515 aa27.18■■□□□ 1.94
CDC42EP1-203ENST00000430687 ESF1Q9H501 851 aaKnown RBP27.18■■□□□ 1.94
CDC42EP1-203ENST00000430687 GCC2Q8IWJ2 1684 aa27.17■■□□□ 1.94
CDC42EP1-203ENST00000430687 CNTLNQ9NXG0 1405 aa27.16■■□□□ 1.94
CDC42EP1-203ENST00000430687 DEPDC5O75140 1603 aa27.14■■□□□ 1.94
CDC42EP1-203ENST00000430687 ACIN1Q9UKV3 1341 aaKnown RBP27.14■■□□□ 1.93
CDC42EP1-203ENST00000430687 KANK1Q14678 1352 aa27.13■■□□□ 1.93
CDC42EP1-203ENST00000430687 PRDM15P57071 1507 aaPredicted RBP27.13■■□□□ 1.93
CDC42EP1-203ENST00000430687 SETD5Q9C0A6 1442 aa27.13■■□□□ 1.93
CDC42EP1-203ENST00000430687 WASHC2CQ9Y4E1 1318 aa27.12■■□□□ 1.93
CDC42EP1-203ENST00000430687 MROH1Q8NDA8 1641 aa27.12■■□□□ 1.93
CDC42EP1-203ENST00000430687 MADDQ8WXG6 1647 aa27.12■■□□□ 1.93
CDC42EP1-203ENST00000430687 KDM5DQ9BY66 1539 aa27.11■■□□□ 1.93
CDC42EP1-203ENST00000430687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.1■■□□□ 1.93
CDC42EP1-203ENST00000430687 FER1L4A9Z1Z3 1794 aa27.09■■□□□ 1.93
CDC42EP1-203ENST00000430687 UNC13BO14795 1591 aa27.08■■□□□ 1.93
CDC42EP1-203ENST00000430687 VWDEQ8N2E2 1590 aa27.06■■□□□ 1.92
CDC42EP1-203ENST00000430687 HRCP23327 699 aa27.05■■□□□ 1.92
CDC42EP1-203ENST00000430687 ZC3H13Q5T200 1668 aaKnown RBP27.05■■□□□ 1.92
CDC42EP1-203ENST00000430687 ZMYM3Q14202 1370 aa27.04■■□□□ 1.92
CDC42EP1-203ENST00000430687 PTPRMP28827 1452 aa27.04■■□□□ 1.92
CDC42EP1-203ENST00000430687 ABCC3O15438 1527 aa27.04■■□□□ 1.92
CDC42EP1-203ENST00000430687 MROH2AA6NES4 1674 aa27.03■■□□□ 1.92
CDC42EP1-203ENST00000430687 NUP155O75694 1391 aa27.03■■□□□ 1.92
CDC42EP1-203ENST00000430687 RIMS1Q86UR5 1692 aaKnown RBP27.03■■□□□ 1.92
CDC42EP1-203ENST00000430687 LMTK2Q8IWU2 1503 aa27.03■■□□□ 1.92
CDC42EP1-203ENST00000430687 RAB3GAP2Q9H2M9 1393 aa27.01■■□□□ 1.91
CDC42EP1-203ENST00000430687 CLTCQ00610 1675 aaKnown RBP27.01■■□□□ 1.91
CDC42EP1-203ENST00000430687 ARHGAP31Q2M1Z3 1444 aa26.98■■□□□ 1.91
CDC42EP1-203ENST00000430687 TRIM52Q96A61 297 aa26.97■■□□□ 1.91
CDC42EP1-203ENST00000430687 IQGAP3Q86VI3 1631 aa26.97■■□□□ 1.91
CDC42EP1-203ENST00000430687 CEBPAP49715 358 aaPredicted RBP26.94■■□□□ 1.9
CDC42EP1-203ENST00000430687 PZPP20742 1482 aa26.93■■□□□ 1.9
CDC42EP1-203ENST00000430687 CEP152O94986 1710 aa26.93■■□□□ 1.9
CDC42EP1-203ENST00000430687 CAMSAP1Q5T5Y3 1602 aa26.92■■□□□ 1.9
CDC42EP1-203ENST00000430687 C3P01024 1663 aa26.92■■□□□ 1.9
CDC42EP1-203ENST00000430687 NPATQ14207 1427 aa26.91■■□□□ 1.9
CDC42EP1-203ENST00000430687 TET3O43151 1660 aa26.9■■□□□ 1.9
CDC42EP1-203ENST00000430687 EFCAB6Q5THR3 1501 aa26.9■■□□□ 1.9
CDC42EP1-203ENST00000430687 RPRD2Q5VT52 1461 aaKnown RBP26.89■■□□□ 1.9
CDC42EP1-203ENST00000430687 PLPPR3Q6T4P5 718 aa26.86■■□□□ 1.89
CDC42EP1-203ENST00000430687 SLC4A1APQ9BWU0 796 aaKnown RBP26.86■■□□□ 1.89
CDC42EP1-203ENST00000430687 FBXO31Q5XUX0 539 aaPredicted RBP26.85■■□□□ 1.89
CDC42EP1-203ENST00000430687 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
CDC42EP1-203ENST00000430687 MPHOSPH9Q99550 1183 aa26.83■■□□□ 1.89
CDC42EP1-203ENST00000430687 ERVK-7P63135 1459 aa26.81■■□□□ 1.88
CDC42EP1-203ENST00000430687 SPATA31D1Q6ZQQ2 1576 aa26.81■■□□□ 1.88
CDC42EP1-203ENST00000430687 PKD2Q13563 968 aa26.8■■□□□ 1.88
CDC42EP1-203ENST00000430687 TNRQ92752 1358 aa26.79■■□□□ 1.88
CDC42EP1-203ENST00000430687 NOS1P29475 1434 aa26.78■■□□□ 1.88
CDC42EP1-203ENST00000430687 E9PCH4 1651 aa26.78■■□□□ 1.88
CDC42EP1-203ENST00000430687 PREX1Q8TCU6 1659 aa26.76■■□□□ 1.87
CDC42EP1-203ENST00000430687 SETD1BQ9UPS6 1966 aaKnown RBP26.73■■□□□ 1.87
CDC42EP1-203ENST00000430687 PTPRTO14522 1441 aa26.73■■□□□ 1.87
CDC42EP1-203ENST00000430687 SLC52A1Q9NWF4 448 aa26.72■■□□□ 1.87
CDC42EP1-203ENST00000430687 NLRP1Q9C000 1473 aa26.72■■□□□ 1.87
CDC42EP1-203ENST00000430687 UHRF1BP1Q6BDS2 1440 aa26.72■■□□□ 1.87
CDC42EP1-203ENST00000430687 SYNMO15061 1565 aa26.67■■□□□ 1.86
CDC42EP1-203ENST00000430687 MYO3AQ8NEV4 1616 aa26.66■■□□□ 1.86
CDC42EP1-203ENST00000430687 A2ML1A8K2U0 1454 aa26.65■■□□□ 1.86
CDC42EP1-203ENST00000430687 IDI1Q13907 227 aa26.64■■□□□ 1.86
CDC42EP1-203ENST00000430687 FOXD1Q16676 465 aa26.64■■□□□ 1.86
CDC42EP1-203ENST00000430687 CFAP65Q6ZU64 1925 aaKnown RBP26.63■■□□□ 1.85
CDC42EP1-203ENST00000430687 PLA2R1Q13018 1463 aa26.63■■□□□ 1.85
CDC42EP1-203ENST00000430687 TRPM2O94759 1503 aa26.63■■□□□ 1.85
CDC42EP1-203ENST00000430687 LMTK3Q96Q04 1460 aa26.62■■□□□ 1.85
CDC42EP1-203ENST00000430687 SPHKAPQ2M3C7 1700 aa26.62■■□□□ 1.85
CDC42EP1-203ENST00000430687 CEP170BQ9Y4F5 1589 aaPredicted RBP26.62■■□□□ 1.85
CDC42EP1-203ENST00000430687 ZNF142P52746 1687 aaPredicted RBP26.6■■□□□ 1.85
CDC42EP1-203ENST00000430687 PIK3C2BO00750 1634 aa26.6■■□□□ 1.85
CDC42EP1-203ENST00000430687 THEMISQ8N1K5 641 aaPredicted RBP26.58■■□□□ 1.85
CDC42EP1-203ENST00000430687 UGGT1Q9NYU2 1555 aa26.57■■□□□ 1.84
CDC42EP1-203ENST00000430687 DHX57Q6P158 1386 aaKnown RBP26.57■■□□□ 1.84
CDC42EP1-203ENST00000430687 ANKRD30BQ9BXX2 1392 aa26.57■■□□□ 1.84
CDC42EP1-203ENST00000430687 STAG3Q9UJ98 1225 aa26.55■■□□□ 1.84
CDC42EP1-203ENST00000430687 CCDC144AA2RUR9 1427 aa26.55■■□□□ 1.84
CDC42EP1-203ENST00000430687 KDM5AP29375 1690 aaKnown RBP26.54■■□□□ 1.84
CDC42EP1-203ENST00000430687 ADGRB3O60242 1522 aa26.51■■□□□ 1.83
CDC42EP1-203ENST00000430687 CLTCL1P53675 1640 aa26.5■■□□□ 1.83
CDC42EP1-203ENST00000430687 UBR1Q8IWV7 1749 aa26.49■■□□□ 1.83
CDC42EP1-203ENST00000430687 HSPA2P54652 639 aa26.48■■□□□ 1.83
CDC42EP1-203ENST00000430687 TMEM131LA2VDJ0 1609 aa26.47■■□□□ 1.83
CDC42EP1-203ENST00000430687 CHGAP10645 457 aaKnown RBP26.47■■□□□ 1.83
CDC42EP1-203ENST00000430687 TMEM2Q9UHN6 1383 aa26.45■■□□□ 1.82
CDC42EP1-203ENST00000430687 SLIT1O75093 1534 aa26.44■■□□□ 1.82
CDC42EP1-203ENST00000430687 ARHGAP23Q9P227 1491 aa26.43■■□□□ 1.82
CDC42EP1-203ENST00000430687 HDGFP51858 240 aaKnown RBP26.43■■□□□ 1.82
CDC42EP1-203ENST00000430687 NEURL4Q96JN8 1562 aa26.42■■□□□ 1.82
CDC42EP1-203ENST00000430687 ANKLE2Q86XL3 938 aa26.42■■□□□ 1.82
CDC42EP1-203ENST00000430687 EID1Q9Y6B2 187 aa26.4■■□□□ 1.82
CDC42EP1-203ENST00000430687 RPGRIP1LQ68CZ1 1315 aa26.39■■□□□ 1.82
CDC42EP1-203ENST00000430687 SPATA31E1Q6ZUB1 1445 aa26.39■■□□□ 1.82
CDC42EP1-203ENST00000430687 KIF1BO60333 1816 aa26.39■■□□□ 1.82
CDC42EP1-203ENST00000430687 ZNF326Q5BKZ1 582 aaKnown RBP26.38■■□□□ 1.81
CDC42EP1-203ENST00000430687 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.38■■□□□ 1.81
CDC42EP1-203ENST00000430687 TXNDC2Q86VQ3 553 aa26.37■■□□□ 1.81
CDC42EP1-203ENST00000430687 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
CDC42EP1-203ENST00000430687 ZFYVE9O95405 1425 aa26.36■■□□□ 1.81
CDC42EP1-203ENST00000430687 RIMS2Q9UQ26 1411 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms