RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 ESF1Q9H501 851 aaKnown RBP38.04■■■■□ 3.68
CPNE1-212ENST00000430570 RNF17Q9BXT8 1623 aaKnown RBP38.04■■■■□ 3.68
CPNE1-212ENST00000430570 PPP6R1Q9UPN7 881 aa38.03■■■■□ 3.68
CPNE1-212ENST00000430570 PLPPR3Q6T4P5 718 aa38.01■■■■□ 3.68
CPNE1-212ENST00000430570 MROH1Q8NDA8 1641 aa38■■■■□ 3.67
CPNE1-212ENST00000430570 CEBPAP49715 358 aaPredicted RBP37.98■■■■□ 3.67
CPNE1-212ENST00000430570 CLTCQ00610 1675 aaKnown RBP37.98■■■■□ 3.67
CPNE1-212ENST00000430570 CNTLNQ9NXG0 1405 aa37.97■■■■□ 3.67
CPNE1-212ENST00000430570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.95■■■■□ 3.679e-9■□□□□ 10.7
CPNE1-212ENST00000430570 NAIPQ13075 1403 aa37.94■■■■□ 3.66
CPNE1-212ENST00000430570 WASHC2CQ9Y4E1 1318 aa37.94■■■■□ 3.66
CPNE1-212ENST00000430570 DEPDC5O75140 1603 aa37.92■■■■□ 3.66
CPNE1-212ENST00000430570 ZMYM3Q14202 1370 aa37.92■■■■□ 3.66
CPNE1-212ENST00000430570 KDM5DQ9BY66 1539 aa37.9■■■■□ 3.66
CPNE1-212ENST00000430570 PRDM15P57071 1507 aaPredicted RBP37.89■■■■□ 3.66
CPNE1-212ENST00000430570 HFM1A2PYH4 1435 aa37.89■■■■□ 3.66
CPNE1-212ENST00000430570 MROH2AA6NES4 1674 aa37.88■■■■□ 3.66
CPNE1-212ENST00000430570 C3P01024 1663 aa37.88■■■■□ 3.66
CPNE1-212ENST00000430570 ABCC3O15438 1527 aa37.87■■■■□ 3.65
CPNE1-212ENST00000430570 GCC2Q8IWJ2 1684 aa37.86■■■■□ 3.65
CPNE1-212ENST00000430570 FAM135AQ9P2D6 1515 aa37.86■■■■□ 3.65
CPNE1-212ENST00000430570 CEP152O94986 1710 aa37.82■■■■□ 3.65
CPNE1-212ENST00000430570 KANK1Q14678 1352 aa37.81■■■■□ 3.64
CPNE1-212ENST00000430570 VWDEQ8N2E2 1590 aa37.8■■■■□ 3.64
CPNE1-212ENST00000430570 UNC13BO14795 1591 aa37.79■■■■□ 3.64
CPNE1-212ENST00000430570 ZC3H13Q5T200 1668 aaKnown RBP37.79■■■■□ 3.64
CPNE1-212ENST00000430570 FBXO31Q5XUX0 539 aaPredicted RBP37.73■■■■□ 3.63
CPNE1-212ENST00000430570 CAMSAP1Q5T5Y3 1602 aa37.72■■■■□ 3.63
CPNE1-212ENST00000430570 NUP155O75694 1391 aa37.71■■■■□ 3.63
CPNE1-212ENST00000430570 LMTK2Q8IWU2 1503 aa37.71■■■■□ 3.63
CPNE1-212ENST00000430570 PZPP20742 1482 aa37.7■■■■□ 3.63
CPNE1-212ENST00000430570 SETD5Q9C0A6 1442 aa37.67■■■■□ 3.62
CPNE1-212ENST00000430570 NPATQ14207 1427 aa37.66■■■■□ 3.62
CPNE1-212ENST00000430570 IQGAP3Q86VI3 1631 aa37.64■■■■□ 3.62
CPNE1-212ENST00000430570 ARHGAP31Q2M1Z3 1444 aa37.63■■■■□ 3.61
CPNE1-212ENST00000430570 SETD1BQ9UPS6 1966 aaKnown RBP37.63■■■■□ 3.61
CPNE1-212ENST00000430570 TRIM52Q96A61 297 aa37.61■■■■□ 3.61
CPNE1-212ENST00000430570 CFAP65Q6ZU64 1925 aaKnown RBP37.6■■■■□ 3.61
CPNE1-212ENST00000430570 EFCAB6Q5THR3 1501 aa37.59■■■■□ 3.61
CPNE1-212ENST00000430570 TET3O43151 1660 aa37.58■■■■□ 3.61
CPNE1-212ENST00000430570 TRIM26Q12899 539 aaPredicted RBP37.57■■■■□ 3.6
CPNE1-212ENST00000430570 RAB3GAP2Q9H2M9 1393 aa37.57■■■■□ 3.6
CPNE1-212ENST00000430570 ERVK-7P63135 1459 aa37.56■■■■□ 3.6
CPNE1-212ENST00000430570 TNRQ92752 1358 aa37.55■■■■□ 3.6
CPNE1-212ENST00000430570 PREX1Q8TCU6 1659 aa37.54■■■■□ 3.6
CPNE1-212ENST00000430570 LMTK3Q96Q04 1460 aa37.54■■■■□ 3.6
CPNE1-212ENST00000430570 SPATA31D1Q6ZQQ2 1576 aa37.53■■■■□ 3.6
CPNE1-212ENST00000430570 UHRF1BP1Q6BDS2 1440 aa37.51■■■■□ 3.6
CPNE1-212ENST00000430570 E9PCH4 1651 aa37.49■■■■□ 3.59
CPNE1-212ENST00000430570 MYO3AQ8NEV4 1616 aa37.46■■■■□ 3.59
CPNE1-212ENST00000430570 RPRD2Q5VT52 1461 aaKnown RBP37.46■■■■□ 3.59
CPNE1-212ENST00000430570 HSPA2P54652 639 aa37.45■■■■□ 3.59
CPNE1-212ENST00000430570 NOS1P29475 1434 aa37.44■■■■□ 3.58
CPNE1-212ENST00000430570 SLC4A1APQ9BWU0 796 aaKnown RBP37.42■■■■□ 3.58
CPNE1-212ENST00000430570 HRCP23327 699 aa37.38■■■■□ 3.58
CPNE1-212ENST00000430570 PKD2Q13563 968 aa37.38■■■■□ 3.58
CPNE1-212ENST00000430570 SYNMO15061 1565 aa37.38■■■■□ 3.57
CPNE1-212ENST00000430570 CEP170BQ9Y4F5 1589 aaPredicted RBP37.38■■■■□ 3.57
CPNE1-212ENST00000430570 MPHOSPH9Q99550 1183 aa37.37■■■■□ 3.57
CPNE1-212ENST00000430570 A2ML1A8K2U0 1454 aa37.36■■■■□ 3.57
CPNE1-212ENST00000430570 NLRP1Q9C000 1473 aa37.36■■■■□ 3.57
CPNE1-212ENST00000430570 ACIN1Q9UKV3 1341 aaKnown RBP37.36■■■■□ 3.57
CPNE1-212ENST00000430570 ZNF142P52746 1687 aaPredicted RBP37.35■■■■□ 3.57
CPNE1-212ENST00000430570 IDI1Q13907 227 aa37.32■■■■□ 3.56
CPNE1-212ENST00000430570 FOXD1Q16676 465 aa37.3■■■■□ 3.56
CPNE1-212ENST00000430570 PTPRTO14522 1441 aa37.27■■■■□ 3.56
CPNE1-212ENST00000430570 SLC52A1Q9NWF4 448 aa37.26■■■■□ 3.56
CPNE1-212ENST00000430570 UGGT1Q9NYU2 1555 aa37.25■■■■□ 3.55
CPNE1-212ENST00000430570 PIK3C2BO00750 1634 aa37.24■■■■□ 3.55
CPNE1-212ENST00000430570 SPHKAPQ2M3C7 1700 aa37.23■■■■□ 3.55
CPNE1-212ENST00000430570 PLA2R1Q13018 1463 aa37.22■■■■□ 3.55
CPNE1-212ENST00000430570 THEMISQ8N1K5 641 aaPredicted RBP37.19■■■■□ 3.54
CPNE1-212ENST00000430570 UBR1Q8IWV7 1749 aa37.19■■■■□ 3.54
CPNE1-212ENST00000430570 STAG3Q9UJ98 1225 aa37.15■■■■□ 3.54
CPNE1-212ENST00000430570 TRPM2O94759 1503 aa37.14■■■■□ 3.54
CPNE1-212ENST00000430570 PCGF6Q9BYE7 350 aa37.13■■■■□ 3.54
CPNE1-212ENST00000430570 STRCQ7RTU9 1775 aa37.12■■■■□ 3.53
CPNE1-212ENST00000430570 NCKAP5LQ9HCH0 1330 aa37.11■■■■□ 3.53
CPNE1-212ENST00000430570 CLTCL1P53675 1640 aa37.1■■■■□ 3.53
CPNE1-212ENST00000430570 ADGRB3O60242 1522 aa37.1■■■■□ 3.53
CPNE1-212ENST00000430570 CHGAP10645 457 aaKnown RBP37.1■■■■□ 3.53
CPNE1-212ENST00000430570 TMEM131LA2VDJ0 1609 aa37.07■■■■□ 3.52
CPNE1-212ENST00000430570 KDM5AP29375 1690 aaKnown RBP37.07■■■■□ 3.52
CPNE1-212ENST00000430570 MYO5BQ9ULV0 1848 aa37.05■■■■□ 3.52
CPNE1-212ENST00000430570 TMEM2Q9UHN6 1383 aa37.02■■■■□ 3.52
CPNE1-212ENST00000430570 ANKLE2Q86XL3 938 aa37.02■■■■□ 3.52
CPNE1-212ENST00000430570 ARHGAP23Q9P227 1491 aa37.01■■■■□ 3.52
CPNE1-212ENST00000430570 SLIT1O75093 1534 aa37.01■■■■□ 3.51
CPNE1-212ENST00000430570 LTKP29376 864 aa36.99■■■■□ 3.51
CPNE1-212ENST00000430570 ANKRD30BQ9BXX2 1392 aa36.98■■■■□ 3.51
CPNE1-212ENST00000430570 CCDC144AA2RUR9 1427 aa36.96■■■■□ 3.51
CPNE1-212ENST00000430570 TXNDC2Q86VQ3 553 aa36.96■■■■□ 3.51
CPNE1-212ENST00000430570 NEURL4Q96JN8 1562 aa36.94■■■■□ 3.5
CPNE1-212ENST00000430570 POLR1AO95602 1720 aaPredicted RBP36.93■■■■□ 3.5
CPNE1-212ENST00000430570 KIF1BO60333 1816 aa36.93■■■■□ 3.5
CPNE1-212ENST00000430570 DMRT2Q9Y5R5 561 aa36.91■■■■□ 3.5
CPNE1-212ENST00000430570 SCAF11Q99590 1463 aaKnown RBP36.91■■■■□ 3.5
CPNE1-212ENST00000430570 EID1Q9Y6B2 187 aa36.9■■■■□ 3.5
CPNE1-212ENST00000430570 ZFYVE9O95405 1425 aa36.9■■■■□ 3.5
CPNE1-212ENST00000430570 RIMS2Q9UQ26 1411 aa36.9■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms