RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 MADDQ8WXG6 1647 aa25.38■■□□□ 1.65
LINC00887-203ENST00000429578 ACIN1Q9UKV3 1341 aaKnown RBP25.37■■□□□ 1.65
LINC00887-203ENST00000429578 UNC13BO14795 1591 aa25.35■■□□□ 1.65
LINC00887-203ENST00000429578 DEPDC5O75140 1603 aa25.35■■□□□ 1.65
LINC00887-203ENST00000429578 SIGLEC1Q9BZZ2 1709 aa25.33■■□□□ 1.65
LINC00887-203ENST00000429578 RNF17Q9BXT8 1623 aaKnown RBP25.31■■□□□ 1.64
LINC00887-203ENST00000429578 MLECQ14165 292 aa25.31■■□□□ 1.64
LINC00887-203ENST00000429578 RIMS1Q86UR5 1692 aaKnown RBP25.3■■□□□ 1.64
LINC00887-203ENST00000429578 AGLP35573 1532 aa25.29■■□□□ 1.64
LINC00887-203ENST00000429578 KIF3BO15066 747 aa25.28■■□□□ 1.64
LINC00887-203ENST00000429578 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
LINC00887-203ENST00000429578 MROH1Q8NDA8 1641 aa25.27■■□□□ 1.64
LINC00887-203ENST00000429578 TRIM52Q96A61 297 aa25.26■■□□□ 1.63
LINC00887-203ENST00000429578 PRDM15P57071 1507 aaPredicted RBP25.26■■□□□ 1.63
LINC00887-203ENST00000429578 IQGAP3Q86VI3 1631 aa25.25■■□□□ 1.63
LINC00887-203ENST00000429578 NUP155O75694 1391 aa25.23■■□□□ 1.63
LINC00887-203ENST00000429578 PLPPR3Q6T4P5 718 aa25.23■■□□□ 1.63
LINC00887-203ENST00000429578 DHX57Q6P158 1386 aaKnown RBP25.22■■□□□ 1.63
LINC00887-203ENST00000429578 VWDEQ8N2E2 1590 aa25.21■■□□□ 1.63
LINC00887-203ENST00000429578 PZPP20742 1482 aa25.21■■□□□ 1.63
LINC00887-203ENST00000429578 FAM135AQ9P2D6 1515 aa25.2■■□□□ 1.62
LINC00887-203ENST00000429578 FER1L4A9Z1Z3 1794 aa25.2■■□□□ 1.62
LINC00887-203ENST00000429578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.19■■□□□ 1.62
LINC00887-203ENST00000429578 CEP152O94986 1710 aa25.18■■□□□ 1.62
LINC00887-203ENST00000429578 KANK1Q14678 1352 aa25.17■■□□□ 1.62
LINC00887-203ENST00000429578 ZC3H13Q5T200 1668 aaKnown RBP25.16■■□□□ 1.62
LINC00887-203ENST00000429578 GGT6Q6P531 493 aa25.16■■□□□ 1.62
LINC00887-203ENST00000429578 MPHOSPH9Q99550 1183 aa25.16■■□□□ 1.62
LINC00887-203ENST00000429578 TET3O43151 1660 aa25.14■■□□□ 1.62
LINC00887-203ENST00000429578 SLC4A1APQ9BWU0 796 aaKnown RBP25.14■■□□□ 1.61
LINC00887-203ENST00000429578 LMTK3Q96Q04 1460 aa25.13■■□□□ 1.61
LINC00887-203ENST00000429578 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
LINC00887-203ENST00000429578 LMTK2Q8IWU2 1503 aa25.11■■□□□ 1.61
LINC00887-203ENST00000429578 ABCC3O15438 1527 aa25.1■■□□□ 1.61
LINC00887-203ENST00000429578 E9PCH4 1651 aa25.09■■□□□ 1.61
LINC00887-203ENST00000429578 CAMSAP1Q5T5Y3 1602 aa25.08■■□□□ 1.61
LINC00887-203ENST00000429578 PPP6R1Q9UPN7 881 aa25.08■■□□□ 1.61
LINC00887-203ENST00000429578 CLTCQ00610 1675 aaKnown RBP25.07■■□□□ 1.6
LINC00887-203ENST00000429578 WASHC2CQ9Y4E1 1318 aa25.06■■□□□ 1.6
LINC00887-203ENST00000429578 EFCAB6Q5THR3 1501 aa25.06■■□□□ 1.6
LINC00887-203ENST00000429578 CEBPAP49715 358 aaPredicted RBP25.05■■□□□ 1.6
LINC00887-203ENST00000429578 PKD2Q13563 968 aa25.05■■□□□ 1.6
LINC00887-203ENST00000429578 CFAP65Q6ZU64 1925 aaKnown RBP25.04■■□□□ 1.6
LINC00887-203ENST00000429578 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
LINC00887-203ENST00000429578 ESF1Q9H501 851 aaKnown RBP25.03■■□□□ 1.6
LINC00887-203ENST00000429578 HSPA2P54652 639 aa25.03■■□□□ 1.6
LINC00887-203ENST00000429578 FOXD1Q16676 465 aa25■■□□□ 1.59
LINC00887-203ENST00000429578 SPHKAPQ2M3C7 1700 aa24.99■■□□□ 1.59
LINC00887-203ENST00000429578 MROH2AA6NES4 1674 aa24.99■■□□□ 1.59
LINC00887-203ENST00000429578 RPRD2Q5VT52 1461 aaKnown RBP24.98■■□□□ 1.59
LINC00887-203ENST00000429578 ILDR1Q86SU0 546 aaPredicted RBP24.98■■□□□ 1.59
LINC00887-203ENST00000429578 ARHGAP31Q2M1Z3 1444 aa24.97■■□□□ 1.59
LINC00887-203ENST00000429578 ANKRD30BQ9BXX2 1392 aa24.95■■□□□ 1.59
LINC00887-203ENST00000429578 NPATQ14207 1427 aa24.95■■□□□ 1.58
LINC00887-203ENST00000429578 CNTLNQ9NXG0 1405 aa24.95■■□□□ 1.58
LINC00887-203ENST00000429578 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
LINC00887-203ENST00000429578 C3P01024 1663 aa24.92■■□□□ 1.58
LINC00887-203ENST00000429578 UHRF1BP1Q6BDS2 1440 aa24.9■■□□□ 1.58
LINC00887-203ENST00000429578 PTPRTO14522 1441 aa24.89■■□□□ 1.58
LINC00887-203ENST00000429578 PLA2R1Q13018 1463 aa24.89■■□□□ 1.58
LINC00887-203ENST00000429578 TRPM2O94759 1503 aa24.89■■□□□ 1.58
LINC00887-203ENST00000429578 ZMYM3Q14202 1370 aa24.88■■□□□ 1.57
LINC00887-203ENST00000429578 SETD1BQ9UPS6 1966 aaKnown RBP24.86■■□□□ 1.57
LINC00887-203ENST00000429578 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
LINC00887-203ENST00000429578 NOS1P29475 1434 aa24.84■■□□□ 1.57
LINC00887-203ENST00000429578 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.56
LINC00887-203ENST00000429578 SPATA31D1Q6ZQQ2 1576 aa24.83■■□□□ 1.56
LINC00887-203ENST00000429578 SYNMO15061 1565 aa24.82■■□□□ 1.56
LINC00887-203ENST00000429578 CLTCL1P53675 1640 aa24.82■■□□□ 1.56
LINC00887-203ENST00000429578 ERVK-7P63135 1459 aa24.82■■□□□ 1.56
LINC00887-203ENST00000429578 KIF1BO60333 1816 aa24.81■■□□□ 1.56
LINC00887-203ENST00000429578 PIK3C2BO00750 1634 aa24.8■■□□□ 1.56
LINC00887-203ENST00000429578 NEUROD1Q13562 356 aa24.8■■□□□ 1.56
LINC00887-203ENST00000429578 FBXO31Q5XUX0 539 aaPredicted RBP24.78■■□□□ 1.56
LINC00887-203ENST00000429578 UGGT1Q9NYU2 1555 aa24.77■■□□□ 1.56
LINC00887-203ENST00000429578 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
LINC00887-203ENST00000429578 FBXO41Q8TF61 875 aa24.73■■□□□ 1.55
LINC00887-203ENST00000429578 DMRT2Q9Y5R5 561 aa24.72■■□□□ 1.55
LINC00887-203ENST00000429578 STRCQ7RTU9 1775 aa24.71■■□□□ 1.55
LINC00887-203ENST00000429578 SLC52A1Q9NWF4 448 aa24.71■■□□□ 1.55
LINC00887-203ENST00000429578 NEURL4Q96JN8 1562 aa24.71■■□□□ 1.55
LINC00887-203ENST00000429578 TIMELESSQ9UNS1 1208 aa24.7■■□□□ 1.54
LINC00887-203ENST00000429578 MYO5BQ9ULV0 1848 aa24.69■■□□□ 1.54
LINC00887-203ENST00000429578 TONSLQ96HA7 1378 aa24.69■■□□□ 1.54
LINC00887-203ENST00000429578 TNRQ92752 1358 aa24.68■■□□□ 1.54
LINC00887-203ENST00000429578 SPATA31E1Q6ZUB1 1445 aa24.67■■□□□ 1.54
LINC00887-203ENST00000429578 IDI1Q13907 227 aa24.66■■□□□ 1.54
LINC00887-203ENST00000429578 ADGRB3O60242 1522 aa24.66■■□□□ 1.54
LINC00887-203ENST00000429578 KDM5AP29375 1690 aaKnown RBP24.65■■□□□ 1.54
LINC00887-203ENST00000429578 TMEM131LA2VDJ0 1609 aa24.65■■□□□ 1.54
LINC00887-203ENST00000429578 MYO3AQ8NEV4 1616 aa24.64■■□□□ 1.53
LINC00887-203ENST00000429578 CERKQ8TCT0 537 aa24.62■■□□□ 1.53
LINC00887-203ENST00000429578 NLRP1Q9C000 1473 aa24.62■■□□□ 1.53
LINC00887-203ENST00000429578 IFT172Q9UG01 1749 aa24.61■■□□□ 1.53
LINC00887-203ENST00000429578 L3MBTL2Q969R5 705 aa24.61■■□□□ 1.53
LINC00887-203ENST00000429578 UBR1Q8IWV7 1749 aa24.6■■□□□ 1.53
LINC00887-203ENST00000429578 ZNF142P52746 1687 aaPredicted RBP24.6■■□□□ 1.53
LINC00887-203ENST00000429578 CEP170BQ9Y4F5 1589 aaPredicted RBP24.59■■□□□ 1.53
LINC00887-203ENST00000429578 RGL3Q3MIN7 710 aa24.58■■□□□ 1.53
LINC00887-203ENST00000429578 PPLO60437 1756 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms