RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 PZPP20742 1482 aa14□□□□□ -0.17
HMGCLL1-206ENST00000428842 A2MP01023 1474 aa13.99□□□□□ -0.17
HMGCLL1-206ENST00000428842 MLH3Q9UHC1 1453 aa13.99□□□□□ -0.17
HMGCLL1-206ENST00000428842 SENP3Q9H4L4 574 aaPredicted RBP13.99□□□□□ -0.17
HMGCLL1-206ENST00000428842 DHX29Q7Z478 1369 aaKnown RBP13.99□□□□□ -0.17
HMGCLL1-206ENST00000428842 DUOX2Q9NRD8 1548 aa13.98□□□□□ -0.17
HMGCLL1-206ENST00000428842 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
HMGCLL1-206ENST00000428842 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
HMGCLL1-206ENST00000428842 MROH1Q8NDA8 1641 aa13.93□□□□□ -0.18
HMGCLL1-206ENST00000428842 ERBINQ96RT1 1412 aa13.93□□□□□ -0.18
HMGCLL1-206ENST00000428842 WASHC2CQ9Y4E1 1318 aa13.92□□□□□ -0.18
HMGCLL1-206ENST00000428842 FBXO31Q5XUX0 539 aaPredicted RBP13.92□□□□□ -0.18
HMGCLL1-206ENST00000428842 CEP152O94986 1710 aa13.92□□□□□ -0.18
HMGCLL1-206ENST00000428842 ZMYM4Q5VZL5 1548 aa13.91□□□□□ -0.18
HMGCLL1-206ENST00000428842 CEBPAP49715 358 aaPredicted RBP13.91□□□□□ -0.18
HMGCLL1-206ENST00000428842 ATP10AO60312 1499 aa13.91□□□□□ -0.18
HMGCLL1-206ENST00000428842 UGGT1Q9NYU2 1555 aa13.89□□□□□ -0.19
HMGCLL1-206ENST00000428842 RGL3Q3MIN7 710 aa13.89□□□□□ -0.19
HMGCLL1-206ENST00000428842 ARHGEF40Q8TER5 1519 aa13.88□□□□□ -0.19
HMGCLL1-206ENST00000428842 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
HMGCLL1-206ENST00000428842 AEBP2Q6ZN18 517 aaPredicted RBP13.88□□□□□ -0.19
HMGCLL1-206ENST00000428842 UNC13BO14795 1591 aa13.88□□□□□ -0.19
HMGCLL1-206ENST00000428842 ANKRD30BQ9BXX2 1392 aa13.87□□□□□ -0.19
HMGCLL1-206ENST00000428842 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
HMGCLL1-206ENST00000428842 E9PCH4 1651 aa13.86□□□□□ -0.19
HMGCLL1-206ENST00000428842 ZNF326Q5BKZ1 582 aaKnown RBP13.85□□□□□ -0.19
HMGCLL1-206ENST00000428842 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
HMGCLL1-206ENST00000428842 DEPDC5O75140 1603 aa13.85□□□□□ -0.19
HMGCLL1-206ENST00000428842 IQGAP3Q86VI3 1631 aa13.84□□□□□ -0.19
HMGCLL1-206ENST00000428842 MAGI2Q86UL8 1455 aa13.84□□□□□ -0.19
HMGCLL1-206ENST00000428842 HIRIP3Q9BW71 556 aaPredicted RBP13.84□□□□□ -0.19
HMGCLL1-206ENST00000428842 KDM2AQ9Y2K7 1162 aa13.84□□□□□ -0.19
HMGCLL1-206ENST00000428842 PRDM15P57071 1507 aaPredicted RBP13.83□□□□□ -0.19
HMGCLL1-206ENST00000428842 CHGAP10645 457 aaKnown RBP13.83□□□□□ -0.2
HMGCLL1-206ENST00000428842 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
HMGCLL1-206ENST00000428842 NPATQ14207 1427 aa13.82□□□□□ -0.2
HMGCLL1-206ENST00000428842 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
HMGCLL1-206ENST00000428842 KANK1Q14678 1352 aa13.82□□□□□ -0.2
HMGCLL1-206ENST00000428842 ABCC3O15438 1527 aa13.81□□□□□ -0.2
HMGCLL1-206ENST00000428842 EIF2AK4Q9P2K8 1649 aaKnown RBP13.81□□□□□ -0.2
HMGCLL1-206ENST00000428842 KDM5DQ9BY66 1539 aa13.81□□□□□ -0.2
HMGCLL1-206ENST00000428842 RNF17Q9BXT8 1623 aaKnown RBP13.8□□□□□ -0.2
HMGCLL1-206ENST00000428842 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
HMGCLL1-206ENST00000428842 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.21
HMGCLL1-206ENST00000428842 TONSLQ96HA7 1378 aa13.77□□□□□ -0.21
HMGCLL1-206ENST00000428842 EFCAB6Q5THR3 1501 aa13.77□□□□□ -0.21
HMGCLL1-206ENST00000428842 CAMSAP1Q5T5Y3 1602 aa13.77□□□□□ -0.21
HMGCLL1-206ENST00000428842 DCAF11Q8TEB1 546 aa13.76□□□□□ -0.21
HMGCLL1-206ENST00000428842 TET3O43151 1660 aa13.76□□□□□ -0.21
HMGCLL1-206ENST00000428842 NBPF8Q3BBV2 869 aa13.75□□□□□ -0.21
HMGCLL1-206ENST00000428842 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
HMGCLL1-206ENST00000428842 ZMYM3Q14202 1370 aa13.75□□□□□ -0.21
HMGCLL1-206ENST00000428842 IDI1Q13907 227 aa13.74□□□□□ -0.21
HMGCLL1-206ENST00000428842 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
HMGCLL1-206ENST00000428842 RPRD2Q5VT52 1461 aaKnown RBP13.73□□□□□ -0.21
HMGCLL1-206ENST00000428842 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
HMGCLL1-206ENST00000428842 BCORL1Q5H9F3 1711 aa13.73□□□□□ -0.21
HMGCLL1-206ENST00000428842 AGLP35573 1532 aa13.73□□□□□ -0.21
HMGCLL1-206ENST00000428842 MADDQ8WXG6 1647 aa13.72□□□□□ -0.21
HMGCLL1-206ENST00000428842 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
HMGCLL1-206ENST00000428842 SYNMO15061 1565 aa13.71□□□□□ -0.21
HMGCLL1-206ENST00000428842 REREQ9P2R6 1566 aa13.71□□□□□ -0.21
HMGCLL1-206ENST00000428842 PPP1R15AO75807 674 aaPredicted RBP13.71□□□□□ -0.22
HMGCLL1-206ENST00000428842 FER1L4A9Z1Z3 1794 aa13.69□□□□□ -0.22
HMGCLL1-206ENST00000428842 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
HMGCLL1-206ENST00000428842 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
HMGCLL1-206ENST00000428842 RIMS1Q86UR5 1692 aaKnown RBP13.69□□□□□ -0.22
HMGCLL1-206ENST00000428842 LMTK2Q8IWU2 1503 aa13.68□□□□□ -0.22
HMGCLL1-206ENST00000428842 PTPRTO14522 1441 aa13.68□□□□□ -0.22
HMGCLL1-206ENST00000428842 PREX1Q8TCU6 1659 aa13.68□□□□□ -0.22
HMGCLL1-206ENST00000428842 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
HMGCLL1-206ENST00000428842 TRPM2O94759 1503 aa13.67□□□□□ -0.22
HMGCLL1-206ENST00000428842 KDM4FA0A1W2PPD8 638 aa13.66□□□□□ -0.22
HMGCLL1-206ENST00000428842 C3P01024 1663 aa13.66□□□□□ -0.22
HMGCLL1-206ENST00000428842 ADGRF5Q8IZF2 1346 aa13.66□□□□□ -0.22
HMGCLL1-206ENST00000428842 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
HMGCLL1-206ENST00000428842 NOS1P29475 1434 aa13.65□□□□□ -0.22
HMGCLL1-206ENST00000428842 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
HMGCLL1-206ENST00000428842 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
HMGCLL1-206ENST00000428842 ZC3H13Q5T200 1668 aaKnown RBP13.63□□□□□ -0.23
HMGCLL1-206ENST00000428842 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
HMGCLL1-206ENST00000428842 PIK3C2BO00750 1634 aa13.61□□□□□ -0.23
HMGCLL1-206ENST00000428842 KIF1BO60333 1816 aa13.6□□□□□ -0.23
HMGCLL1-206ENST00000428842 CFAP70Q5T0N1 1121 aa13.6□□□□□ -0.23
HMGCLL1-206ENST00000428842 TMEM132EQ6IEE7 984 aa13.6□□□□□ -0.23
HMGCLL1-206ENST00000428842 CNTLNQ9NXG0 1405 aa13.6□□□□□ -0.23
HMGCLL1-206ENST00000428842 TNRQ92752 1358 aa13.6□□□□□ -0.23
HMGCLL1-206ENST00000428842 ADAMTSL3P82987 1691 aa13.6□□□□□ -0.23
HMGCLL1-206ENST00000428842 HSPA2P54652 639 aa13.58□□□□□ -0.24
HMGCLL1-206ENST00000428842 ACIN1Q9UKV3 1341 aaKnown RBP13.57□□□□□ -0.24
HMGCLL1-206ENST00000428842 SPATA31D1Q6ZQQ2 1576 aa13.57□□□□□ -0.24
HMGCLL1-206ENST00000428842 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
HMGCLL1-206ENST00000428842 PTPRMP28827 1452 aa13.56□□□□□ -0.24
HMGCLL1-206ENST00000428842 TMEM131LA2VDJ0 1609 aa13.56□□□□□ -0.24
HMGCLL1-206ENST00000428842 LTKP29376 864 aa13.56□□□□□ -0.24
HMGCLL1-206ENST00000428842 ADGRB3O60242 1522 aa13.56□□□□□ -0.24
HMGCLL1-206ENST00000428842 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
HMGCLL1-206ENST00000428842 BCANQ96GW7 911 aa13.54□□□□□ -0.24
HMGCLL1-206ENST00000428842 A2ML1A8K2U0 1454 aa13.54□□□□□ -0.24
HMGCLL1-206ENST00000428842 PRAG1Q86YV5 1406 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms