RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 ADGBQ8N7X0 1667 aa13.36□□□□□ -0.27
ITSN1-216ENST00000428240 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
ITSN1-216ENST00000428240 TNRQ92752 1358 aa13.35□□□□□ -0.27
ITSN1-216ENST00000428240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.35□□□□□ -0.27
ITSN1-216ENST00000428240 ALKQ9UM73 1620 aa13.35□□□□□ -0.27
ITSN1-216ENST00000428240 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
ITSN1-216ENST00000428240 POLR1AO95602 1720 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-216ENST00000428240 VWDEQ8N2E2 1590 aa13.34□□□□□ -0.27
ITSN1-216ENST00000428240 RTEL1-TNFRSF6BF6WH68 1400 aa13.33□□□□□ -0.28
ITSN1-216ENST00000428240 KIF3BO15066 747 aa13.33□□□□□ -0.28
ITSN1-216ENST00000428240 ANKLE2Q86XL3 938 aa13.33□□□□□ -0.28
ITSN1-216ENST00000428240 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
ITSN1-216ENST00000428240 MTUS2Q5JR59 1369 aa13.32□□□□□ -0.28
ITSN1-216ENST00000428240 PZPP20742 1482 aa13.32□□□□□ -0.28
ITSN1-216ENST00000428240 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-216ENST00000428240 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
ITSN1-216ENST00000428240 KDM5DQ9BY66 1539 aa13.31□□□□□ -0.28
ITSN1-216ENST00000428240 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-216ENST00000428240 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-216ENST00000428240 WASHC2CQ9Y4E1 1318 aa13.3□□□□□ -0.28
ITSN1-216ENST00000428240 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
ITSN1-216ENST00000428240 MED14O60244 1454 aa13.29□□□□□ -0.28
ITSN1-216ENST00000428240 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
ITSN1-216ENST00000428240 NLRP1Q9C000 1473 aa13.27□□□□□ -0.29
ITSN1-216ENST00000428240 LRRC7Q96NW7 1537 aa13.27□□□□□ -0.29
ITSN1-216ENST00000428240 FAM135AQ9P2D6 1515 aa13.27□□□□□ -0.29
ITSN1-216ENST00000428240 DEPDC5O75140 1603 aa13.26□□□□□ -0.29
ITSN1-216ENST00000428240 STRCP1A6NGW2 1772 aa13.25□□□□□ -0.29
ITSN1-216ENST00000428240 CCDC141Q6ZP82 1450 aa13.25□□□□□ -0.29
ITSN1-216ENST00000428240 EHBP1L1Q8N3D4 1523 aa13.24□□□□□ -0.29
ITSN1-216ENST00000428240 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
ITSN1-216ENST00000428240 RGS17Q9UGC6 210 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-216ENST00000428240 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
ITSN1-216ENST00000428240 CAMSAP2Q08AD1 1489 aa13.23□□□□□ -0.29
ITSN1-216ENST00000428240 RNF17Q9BXT8 1623 aaKnown RBP13.21□□□□□ -0.29
ITSN1-216ENST00000428240 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
ITSN1-216ENST00000428240 SYNMO15061 1565 aa13.2□□□□□ -0.3
ITSN1-216ENST00000428240 NCOA2Q15596 1464 aa13.19□□□□□ -0.3
ITSN1-216ENST00000428240 ABCC3O15438 1527 aa13.18□□□□□ -0.3
ITSN1-216ENST00000428240 ERVK-7P63135 1459 aa13.18□□□□□ -0.3
ITSN1-216ENST00000428240 ZC3H13Q5T200 1668 aaKnown RBP13.18□□□□□ -0.3
ITSN1-216ENST00000428240 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
ITSN1-216ENST00000428240 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
ITSN1-216ENST00000428240 LTKP29376 864 aa13.17□□□□□ -0.3
ITSN1-216ENST00000428240 ARHGEF5Q12774 1597 aa13.15□□□□□ -0.3
ITSN1-216ENST00000428240 SCAF11Q99590 1463 aaKnown RBP13.15□□□□□ -0.3
ITSN1-216ENST00000428240 UBR1Q8IWV7 1749 aa13.14□□□□□ -0.31
ITSN1-216ENST00000428240 POTEAQ6S8J7 498 aa13.14□□□□□ -0.31
ITSN1-216ENST00000428240 MROH1Q8NDA8 1641 aa13.13□□□□□ -0.31
ITSN1-216ENST00000428240 ARHGAP23Q9P227 1491 aa13.13□□□□□ -0.31
ITSN1-216ENST00000428240 TXNDC2Q86VQ3 553 aa13.13□□□□□ -0.31
ITSN1-216ENST00000428240 XIRP1Q702N8 1843 aaKnown RBP13.12□□□□□ -0.31
ITSN1-216ENST00000428240 SLIT1O75093 1534 aa13.12□□□□□ -0.31
ITSN1-216ENST00000428240 FAM135BQ49AJ0 1406 aa13.11□□□□□ -0.31
ITSN1-216ENST00000428240 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
ITSN1-216ENST00000428240 CEP152O94986 1710 aa13.1□□□□□ -0.31
ITSN1-216ENST00000428240 EIF2AK4Q9P2K8 1649 aaKnown RBP13.1□□□□□ -0.31
ITSN1-216ENST00000428240 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
ITSN1-216ENST00000428240 TMEM94Q12767 1356 aa13.08□□□□□ -0.31
ITSN1-216ENST00000428240 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
ITSN1-216ENST00000428240 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
ITSN1-216ENST00000428240 ARHGAP31Q2M1Z3 1444 aa13.06□□□□□ -0.32
ITSN1-216ENST00000428240 CFAP65Q6ZU64 1925 aaKnown RBP13.05□□□□□ -0.32
ITSN1-216ENST00000428240 MAP3K1Q13233 1512 aa13.05□□□□□ -0.32
ITSN1-216ENST00000428240 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
ITSN1-216ENST00000428240 ROBO1Q9Y6N7 1651 aa13.05□□□□□ -0.32
ITSN1-216ENST00000428240 LRRC9Q6ZRR7 1453 aa13.04□□□□□ -0.32
ITSN1-216ENST00000428240 DUOX2Q9NRD8 1548 aa13.04□□□□□ -0.32
ITSN1-216ENST00000428240 KCNA6P17658 529 aa13.04□□□□□ -0.32
ITSN1-216ENST00000428240 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
ITSN1-216ENST00000428240 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-216ENST00000428240 PROSER2Q86WR7 435 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-216ENST00000428240 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.32
ITSN1-216ENST00000428240 IDI1Q13907 227 aa13.02□□□□□ -0.33
ITSN1-216ENST00000428240 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-216ENST00000428240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
ITSN1-216ENST00000428240 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
ITSN1-216ENST00000428240 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
ITSN1-216ENST00000428240 TET3O43151 1660 aa13.02□□□□□ -0.33
ITSN1-216ENST00000428240 RRP7BPQ9NSQ0 103 aa13.01□□□□□ -0.33
ITSN1-216ENST00000428240 MYOM3Q5VTT5 1437 aa13.01□□□□□ -0.33
ITSN1-216ENST00000428240 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
ITSN1-216ENST00000428240 ERBINQ96RT1 1412 aa13□□□□□ -0.33
ITSN1-216ENST00000428240 ABCC5O15440 1437 aa12.98□□□□□ -0.33
ITSN1-216ENST00000428240 SLAIN2Q9P270 581 aa12.98□□□□□ -0.33
ITSN1-216ENST00000428240 NKTRP30414 1462 aaKnown RBP12.97□□□□□ -0.33
ITSN1-216ENST00000428240 MSH6P52701 1360 aa12.97□□□□□ -0.33
ITSN1-216ENST00000428240 JCADQ9P266 1359 aa12.97□□□□□ -0.33
ITSN1-216ENST00000428240 NWD1Q149M9 1564 aa12.97□□□□□ -0.33
ITSN1-216ENST00000428240 VPS8Q8N3P4 1428 aa12.96□□□□□ -0.33
ITSN1-216ENST00000428240 KDM5AP29375 1690 aaKnown RBP12.96□□□□□ -0.33
ITSN1-216ENST00000428240 PHLPP1O60346 1717 aa12.96□□□□□ -0.34
ITSN1-216ENST00000428240 KANK1Q14678 1352 aa12.95□□□□□ -0.34
ITSN1-216ENST00000428240 LMTK2Q8IWU2 1503 aa12.95□□□□□ -0.34
ITSN1-216ENST00000428240 BCANQ96GW7 911 aa12.95□□□□□ -0.34
ITSN1-216ENST00000428240 LRP6O75581 1613 aa12.95□□□□□ -0.34
ITSN1-216ENST00000428240 UPF1Q92900 1129 aaKnown RBP eCLIP12.94□□□□□ -0.34
ITSN1-216ENST00000428240 NOS1P29475 1434 aa12.94□□□□□ -0.34
ITSN1-216ENST00000428240 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
ITSN1-216ENST00000428240 COL16A1Q07092 1604 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms