RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 ADAMTSL3P82987 1691 aa19.24■□□□□ 0.67
CCHCR1-205ENST00000428174 GCC2Q8IWJ2 1684 aa19.24■□□□□ 0.67
CCHCR1-205ENST00000428174 RNF17Q9BXT8 1623 aaKnown RBP19.24■□□□□ 0.67
CCHCR1-205ENST00000428174 SETD5Q9C0A6 1442 aa19.24■□□□□ 0.67
CCHCR1-205ENST00000428174 KANK1Q14678 1352 aa19.22■□□□□ 0.67
CCHCR1-205ENST00000428174 WASHC2CQ9Y4E1 1318 aa19.22■□□□□ 0.67
CCHCR1-205ENST00000428174 MADDQ8WXG6 1647 aa19.21■□□□□ 0.67
CCHCR1-205ENST00000428174 CNTLNQ9NXG0 1405 aa19.2■□□□□ 0.66
CCHCR1-205ENST00000428174 MROH1Q8NDA8 1641 aa19.2■□□□□ 0.66
CCHCR1-205ENST00000428174 DEPDC5O75140 1603 aa19.19■□□□□ 0.66
CCHCR1-205ENST00000428174 PRDM15P57071 1507 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-205ENST00000428174 TRIM52Q96A61 297 aa19.18■□□□□ 0.66
CCHCR1-205ENST00000428174 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
CCHCR1-205ENST00000428174 FER1L4A9Z1Z3 1794 aa19.18■□□□□ 0.66
CCHCR1-205ENST00000428174 NUP155O75694 1391 aa19.18■□□□□ 0.66
CCHCR1-205ENST00000428174 KDM5DQ9BY66 1539 aa19.17■□□□□ 0.66
CCHCR1-205ENST00000428174 UNC13BO14795 1591 aa19.17■□□□□ 0.66
CCHCR1-205ENST00000428174 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
CCHCR1-205ENST00000428174 RIMS1Q86UR5 1692 aaKnown RBP19.16■□□□□ 0.66
CCHCR1-205ENST00000428174 ACIN1Q9UKV3 1341 aaKnown RBP19.16■□□□□ 0.66
CCHCR1-205ENST00000428174 ABCC3O15438 1527 aa19.15■□□□□ 0.66
CCHCR1-205ENST00000428174 ZMYM3Q14202 1370 aa19.15■□□□□ 0.66
CCHCR1-205ENST00000428174 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
CCHCR1-205ENST00000428174 PTPRMP28827 1452 aa19.14■□□□□ 0.65
CCHCR1-205ENST00000428174 VWDEQ8N2E2 1590 aa19.14■□□□□ 0.65
CCHCR1-205ENST00000428174 CLTCQ00610 1675 aaKnown RBP19.14■□□□□ 0.65
CCHCR1-205ENST00000428174 HRCP23327 699 aa19.13■□□□□ 0.65
CCHCR1-205ENST00000428174 CEBPAP49715 358 aaPredicted RBP19.13■□□□□ 0.65
CCHCR1-205ENST00000428174 PCGF6Q9BYE7 350 aa19.13■□□□□ 0.65
CCHCR1-205ENST00000428174 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-205ENST00000428174 LMTK2Q8IWU2 1503 aa19.11■□□□□ 0.65
CCHCR1-205ENST00000428174 CEP152O94986 1710 aa19.1■□□□□ 0.65
CCHCR1-205ENST00000428174 MROH2AA6NES4 1674 aa19.1■□□□□ 0.65
CCHCR1-205ENST00000428174 IQGAP3Q86VI3 1631 aa19.09■□□□□ 0.65
CCHCR1-205ENST00000428174 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
CCHCR1-205ENST00000428174 ARHGAP31Q2M1Z3 1444 aa19.07■□□□□ 0.64
CCHCR1-205ENST00000428174 CAMSAP1Q5T5Y3 1602 aa19.07■□□□□ 0.64
CCHCR1-205ENST00000428174 PZPP20742 1482 aa19.06■□□□□ 0.64
CCHCR1-205ENST00000428174 C3P01024 1663 aa19.05■□□□□ 0.64
CCHCR1-205ENST00000428174 FBXO31Q5XUX0 539 aaPredicted RBP19.05■□□□□ 0.64
CCHCR1-205ENST00000428174 NPATQ14207 1427 aa19.05■□□□□ 0.64
CCHCR1-205ENST00000428174 TET3O43151 1660 aa19.05■□□□□ 0.64
CCHCR1-205ENST00000428174 MPHOSPH9Q99550 1183 aa19.04■□□□□ 0.64
CCHCR1-205ENST00000428174 EFCAB6Q5THR3 1501 aa19.04■□□□□ 0.64
CCHCR1-205ENST00000428174 PKD2Q13563 968 aa19.03■□□□□ 0.64
CCHCR1-205ENST00000428174 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
CCHCR1-205ENST00000428174 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
CCHCR1-205ENST00000428174 ERVK-7P63135 1459 aa19■□□□□ 0.63
CCHCR1-205ENST00000428174 TNRQ92752 1358 aa18.99■□□□□ 0.63
CCHCR1-205ENST00000428174 CFAP65Q6ZU64 1925 aaKnown RBP18.98■□□□□ 0.63
CCHCR1-205ENST00000428174 E9PCH4 1651 aa18.97■□□□□ 0.63
CCHCR1-205ENST00000428174 NOS1P29475 1434 aa18.97■□□□□ 0.63
CCHCR1-205ENST00000428174 SPATA31D1Q6ZQQ2 1576 aa18.97■□□□□ 0.63
CCHCR1-205ENST00000428174 SETD1BQ9UPS6 1966 aaKnown RBP18.96■□□□□ 0.63
CCHCR1-205ENST00000428174 FOXD1Q16676 465 aa18.95■□□□□ 0.62
CCHCR1-205ENST00000428174 PREX1Q8TCU6 1659 aa18.95■□□□□ 0.62
CCHCR1-205ENST00000428174 UHRF1BP1Q6BDS2 1440 aa18.92■□□□□ 0.62
CCHCR1-205ENST00000428174 PTPRTO14522 1441 aa18.91■□□□□ 0.62
CCHCR1-205ENST00000428174 SLC52A1Q9NWF4 448 aa18.91■□□□□ 0.62
CCHCR1-205ENST00000428174 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
CCHCR1-205ENST00000428174 SYNMO15061 1565 aa18.89■□□□□ 0.62
CCHCR1-205ENST00000428174 IDI1Q13907 227 aa18.89■□□□□ 0.61
CCHCR1-205ENST00000428174 PLA2R1Q13018 1463 aa18.88■□□□□ 0.61
CCHCR1-205ENST00000428174 SPHKAPQ2M3C7 1700 aa18.86■□□□□ 0.61
CCHCR1-205ENST00000428174 MYO3AQ8NEV4 1616 aa18.86■□□□□ 0.61
CCHCR1-205ENST00000428174 A2ML1A8K2U0 1454 aa18.86■□□□□ 0.61
CCHCR1-205ENST00000428174 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
CCHCR1-205ENST00000428174 TRPM2O94759 1503 aa18.85■□□□□ 0.61
CCHCR1-205ENST00000428174 STAG3Q9UJ98 1225 aa18.85■□□□□ 0.61
CCHCR1-205ENST00000428174 CEP170BQ9Y4F5 1589 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-205ENST00000428174 ANKRD30BQ9BXX2 1392 aa18.83■□□□□ 0.61
CCHCR1-205ENST00000428174 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
CCHCR1-205ENST00000428174 UGGT1Q9NYU2 1555 aa18.83■□□□□ 0.6
CCHCR1-205ENST00000428174 LMTK3Q96Q04 1460 aa18.83■□□□□ 0.6
CCHCR1-205ENST00000428174 THEMISQ8N1K5 641 aaPredicted RBP18.82■□□□□ 0.6
CCHCR1-205ENST00000428174 CCDC144AA2RUR9 1427 aa18.82■□□□□ 0.6
CCHCR1-205ENST00000428174 HSPA2P54652 639 aa18.81■□□□□ 0.6
CCHCR1-205ENST00000428174 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
CCHCR1-205ENST00000428174 ZNF142P52746 1687 aaPredicted RBP18.8■□□□□ 0.6
CCHCR1-205ENST00000428174 CLTCL1P53675 1640 aa18.79■□□□□ 0.6
CCHCR1-205ENST00000428174 ADGRB3O60242 1522 aa18.78■□□□□ 0.6
CCHCR1-205ENST00000428174 UBR1Q8IWV7 1749 aa18.75■□□□□ 0.59
CCHCR1-205ENST00000428174 ZNF326Q5BKZ1 582 aaKnown RBP18.74■□□□□ 0.59
CCHCR1-205ENST00000428174 TMEM131LA2VDJ0 1609 aa18.74■□□□□ 0.59
CCHCR1-205ENST00000428174 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
CCHCR1-205ENST00000428174 TMEM2Q9UHN6 1383 aa18.72■□□□□ 0.59
CCHCR1-205ENST00000428174 KIF1BO60333 1816 aa18.72■□□□□ 0.59
CCHCR1-205ENST00000428174 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
CCHCR1-205ENST00000428174 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
CCHCR1-205ENST00000428174 ANKLE2Q86XL3 938 aa18.71■□□□□ 0.59
CCHCR1-205ENST00000428174 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
CCHCR1-205ENST00000428174 TXNDC2Q86VQ3 553 aa18.7■□□□□ 0.58
CCHCR1-205ENST00000428174 SIN3AQ96ST3 1273 aa18.7■□□□□ 0.58
CCHCR1-205ENST00000428174 EID1Q9Y6B2 187 aa18.7■□□□□ 0.58
CCHCR1-205ENST00000428174 SLIT1O75093 1534 aa18.69■□□□□ 0.58
CCHCR1-205ENST00000428174 SPATA31E1Q6ZUB1 1445 aa18.69■□□□□ 0.58
CCHCR1-205ENST00000428174 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
CCHCR1-205ENST00000428174 ARHGAP23Q9P227 1491 aa18.69■□□□□ 0.58
CCHCR1-205ENST00000428174 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
CCHCR1-205ENST00000428174 MYO5BQ9ULV0 1848 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms