RNA–Protein interactions for RNA: ENST00000427795.2

XPC-202, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-202ENST00000427795 CCNB3Q8WWL7 1395 aa20.11■□□□□ 0.81
XPC-202ENST00000427795 ZNF644Q9H582 1327 aaPredicted RBP20.11■□□□□ 0.81
XPC-202ENST00000427795 TOM1O60784 492 aa20.11■□□□□ 0.81
XPC-202ENST00000427795 MBD5Q9P267 1494 aa20.1■□□□□ 0.81
XPC-202ENST00000427795 TNRQ92752 1358 aa20.09■□□□□ 0.81
XPC-202ENST00000427795 PZPP20742 1482 aa20.07■□□□□ 0.8
XPC-202ENST00000427795 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
XPC-202ENST00000427795 TIAM1Q13009 1591 aa20.07■□□□□ 0.8
XPC-202ENST00000427795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.07■□□□□ 0.8
XPC-202ENST00000427795 DHX29Q7Z478 1369 aaKnown RBP20.06■□□□□ 0.8
XPC-202ENST00000427795 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
XPC-202ENST00000427795 STRCP1A6NGW2 1772 aa20.04■□□□□ 0.8
XPC-202ENST00000427795 KDM5DQ9BY66 1539 aa20.04■□□□□ 0.8
XPC-202ENST00000427795 MED14O60244 1454 aa20.03■□□□□ 0.8
XPC-202ENST00000427795 DEPDC5O75140 1603 aa20.02■□□□□ 0.8
XPC-202ENST00000427795 ANKLE2Q86XL3 938 aa20.02■□□□□ 0.8
XPC-202ENST00000427795 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
XPC-202ENST00000427795 MTUS2Q5JR59 1369 aa20.02■□□□□ 0.8
XPC-202ENST00000427795 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.79
XPC-202ENST00000427795 KIF3BO15066 747 aa20■□□□□ 0.79
XPC-202ENST00000427795 FAM135AQ9P2D6 1515 aa20■□□□□ 0.79
XPC-202ENST00000427795 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
XPC-202ENST00000427795 IQGAP1P46940 1657 aa19.99■□□□□ 0.79
XPC-202ENST00000427795 MIA2Q96PC5 1412 aa19.99■□□□□ 0.79
XPC-202ENST00000427795 NLRP1Q9C000 1473 aa19.99■□□□□ 0.79
XPC-202ENST00000427795 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
XPC-202ENST00000427795 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
XPC-202ENST00000427795 THEMISQ8N1K5 641 aaPredicted RBP19.97■□□□□ 0.79
XPC-202ENST00000427795 WASHC2CQ9Y4E1 1318 aa19.97■□□□□ 0.79
XPC-202ENST00000427795 EHBP1L1Q8N3D4 1523 aa19.95■□□□□ 0.78
XPC-202ENST00000427795 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
XPC-202ENST00000427795 CCDC141Q6ZP82 1450 aa19.94■□□□□ 0.78
XPC-202ENST00000427795 RGS17Q9UGC6 210 aaPredicted RBP19.93■□□□□ 0.78
XPC-202ENST00000427795 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
XPC-202ENST00000427795 SYNMO15061 1565 aa19.92■□□□□ 0.78
XPC-202ENST00000427795 ZC3H13Q5T200 1668 aaKnown RBP19.91■□□□□ 0.78
XPC-202ENST00000427795 CAMSAP2Q08AD1 1489 aa19.91■□□□□ 0.78
XPC-202ENST00000427795 ABCC3O15438 1527 aa19.87■□□□□ 0.77
XPC-202ENST00000427795 XIRP1Q702N8 1843 aaKnown RBP19.87■□□□□ 0.77
XPC-202ENST00000427795 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
XPC-202ENST00000427795 NCOA2Q15596 1464 aa19.85■□□□□ 0.77
XPC-202ENST00000427795 UBR1Q8IWV7 1749 aa19.85■□□□□ 0.77
XPC-202ENST00000427795 ARHGEF5Q12774 1597 aa19.84■□□□□ 0.77
XPC-202ENST00000427795 CFAP65Q6ZU64 1925 aaKnown RBP19.84■□□□□ 0.77
XPC-202ENST00000427795 MROH1Q8NDA8 1641 aa19.82■□□□□ 0.76
XPC-202ENST00000427795 RSPH4AQ5TD94 716 aa19.81■□□□□ 0.76
XPC-202ENST00000427795 SCAF11Q99590 1463 aaKnown RBP19.8■□□□□ 0.76
XPC-202ENST00000427795 CEP152O94986 1710 aa19.79■□□□□ 0.76
XPC-202ENST00000427795 LTKP29376 864 aa19.79■□□□□ 0.76
XPC-202ENST00000427795 ARHGAP23Q9P227 1491 aa19.78■□□□□ 0.76
XPC-202ENST00000427795 EIF2AK4Q9P2K8 1649 aaKnown RBP19.76■□□□□ 0.75
XPC-202ENST00000427795 POTEAQ6S8J7 498 aa19.76■□□□□ 0.75
XPC-202ENST00000427795 SLIT1O75093 1534 aa19.76■□□□□ 0.75
XPC-202ENST00000427795 MAST1Q9Y2H9 1570 aa19.75■□□□□ 0.75
XPC-202ENST00000427795 TSPY4P0CV99 314 aa19.75■□□□□ 0.75
XPC-202ENST00000427795 TSPY10P0CW01 314 aa19.75■□□□□ 0.75
XPC-202ENST00000427795 FAM135BQ49AJ0 1406 aa19.73■□□□□ 0.75
XPC-202ENST00000427795 TXNDC2Q86VQ3 553 aa19.72■□□□□ 0.75
XPC-202ENST00000427795 SETD1AO15047 1707 aaKnown RBP19.7■□□□□ 0.74
XPC-202ENST00000427795 ROBO1Q9Y6N7 1651 aa19.69■□□□□ 0.74
XPC-202ENST00000427795 PIK3C2BO00750 1634 aa19.68■□□□□ 0.74
XPC-202ENST00000427795 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
XPC-202ENST00000427795 MAP3K1Q13233 1512 aa19.67■□□□□ 0.74
XPC-202ENST00000427795 ARHGAP31Q2M1Z3 1444 aa19.66■□□□□ 0.74
XPC-202ENST00000427795 PRDM15P57071 1507 aaPredicted RBP19.66■□□□□ 0.74
XPC-202ENST00000427795 SRCAPQ6ZRS2 3230 aa19.65■□□□□ 0.74
XPC-202ENST00000427795 TMEM2Q9UHN6 1383 aa19.65■□□□□ 0.74
XPC-202ENST00000427795 EID1Q9Y6B2 187 aa19.64■□□□□ 0.73
XPC-202ENST00000427795 DUOX2Q9NRD8 1548 aa19.64■□□□□ 0.73
XPC-202ENST00000427795 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
XPC-202ENST00000427795 LRRC9Q6ZRR7 1453 aa19.62■□□□□ 0.73
XPC-202ENST00000427795 TET3O43151 1660 aa19.62■□□□□ 0.73
XPC-202ENST00000427795 KCNA6P17658 529 aa19.59■□□□□ 0.73
XPC-202ENST00000427795 KDM5AP29375 1690 aaKnown RBP19.59■□□□□ 0.73
XPC-202ENST00000427795 EFCAB6Q5THR3 1501 aa19.58■□□□□ 0.73
XPC-202ENST00000427795 SLC26A8Q96RN1 970 aa19.58■□□□□ 0.72
XPC-202ENST00000427795 NWD1Q149M9 1564 aa19.57■□□□□ 0.72
XPC-202ENST00000427795 PROSER2Q86WR7 435 aaPredicted RBP19.57■□□□□ 0.72
XPC-202ENST00000427795 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
XPC-202ENST00000427795 PHLPP1O60346 1717 aa19.56■□□□□ 0.72
XPC-202ENST00000427795 MYOM3Q5VTT5 1437 aa19.56■□□□□ 0.72
XPC-202ENST00000427795 ERBINQ96RT1 1412 aa19.56■□□□□ 0.72
XPC-202ENST00000427795 CROCC2H7BZ55 1655 aa19.55■□□□□ 0.72
XPC-202ENST00000427795 NKTRP30414 1462 aaKnown RBP19.54■□□□□ 0.72
XPC-202ENST00000427795 IDI1Q13907 227 aa19.54■□□□□ 0.72
XPC-202ENST00000427795 KANK4Q5T7N3 995 aaPredicted RBP19.54■□□□□ 0.72
XPC-202ENST00000427795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.72
XPC-202ENST00000427795 STAG3Q9UJ98 1225 aa19.53■□□□□ 0.72
XPC-202ENST00000427795 RRP7BPQ9NSQ0 103 aa19.52■□□□□ 0.72
XPC-202ENST00000427795 JCADQ9P266 1359 aa19.52■□□□□ 0.72
XPC-202ENST00000427795 ABCC5O15440 1437 aa19.51■□□□□ 0.71
XPC-202ENST00000427795 COL16A1Q07092 1604 aaPredicted RBP19.51■□□□□ 0.71
XPC-202ENST00000427795 LRP6O75581 1613 aa19.51■□□□□ 0.71
XPC-202ENST00000427795 MSH6P52701 1360 aa19.5■□□□□ 0.71
XPC-202ENST00000427795 SLAIN2Q9P270 581 aa19.5■□□□□ 0.71
XPC-202ENST00000427795 ADGRB3O60242 1522 aa19.5■□□□□ 0.71
XPC-202ENST00000427795 LMTK2Q8IWU2 1503 aa19.5■□□□□ 0.71
XPC-202ENST00000427795 VPS8Q8N3P4 1428 aa19.49■□□□□ 0.71
XPC-202ENST00000427795 NOS1P29475 1434 aa19.48■□□□□ 0.71
XPC-202ENST00000427795 CHD2O14647 1828 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms